FFCP PHASE1:Mm9::chr13:24726295..24726318,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:24726295..24726318,-|id=chr13:24726295..24726318,-|ontology_enrichment_celltype=CL:0000838!4.28e-21!12;CL:0000542!2.28e-19!13;CL:0000051!2.28e-19!13;CL:0000084!4.01e-18!11;CL:0000827!4.01e-18!11;CL:0000738!1.74e-14!17;CL:0002087!1.74e-14!17;CL:0000624!3.65e-14!8;CL:0000893!1.65e-13!6;CL:0002489!1.65e-13!6;CL:0000898!1.65e-13!6;CL:0000809!1.65e-13!6;CL:0000810!1.65e-13!6;CL:0000895!1.65e-13!6;CL:0000808!1.65e-13!6;CL:0000894!1.65e-13!6;CL:0000806!1.65e-13!6;CL:0000807!1.65e-13!6;CL:0000805!1.65e-13!6;CL:0002425!1.65e-13!6;CL:0002436!1.65e-13!6;CL:0002427!1.65e-13!6;CL:0002428!1.65e-13!6;CL:0002429!1.65e-13!6;CL:0002433!1.65e-13!6;CL:0002431!1.65e-13!6;CL:0002432!1.65e-13!6;CL:0000988!7.03e-13!32;CL:0002032!7.03e-13!32;CL:0000037!7.03e-13!32;CL:0000566!7.03e-13!32;CL:0000837!7.03e-13!32;CL:0000791!1.54e-12!9;CL:0000789!1.54e-12!9;CL:0002420!1.54e-12!9;CL:0002419!1.54e-12!9;CL:0000790!1.54e-12!9;CL:0002031!8.47e-12!25;CL:0000034!2.85e-09!97;CL:0002320!2.66e-08!46;CL:0000134!2.66e-08!46;CL:0000219!9.33e-07!54|ontology_enrichment_celltype_v019_2=CL:0000355,4.12e-15,9|ontology_enrichment_disease=DOID:0060100!5.49e-12!3;DOID:4045!5.49e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-43,3;DOID:4045,1.75e-43,3;DOID:0050686,3.12e-22,6|ontology_enrichment_uberon=UBERON:0002384!2.66e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.12e-15,9;UBERON:0002036,4.12e-15,9;UBERON:0002385,4.12e-15,9;UBERON:0000486,4.12e-15,9;UBERON:0007503,4.12e-15,9;UBERON:0001015,4.12e-15,9;UBERON:0002329,4.12e-15,9;UBERON:0003082,4.12e-15,9;UBERON:0003059,4.12e-15,9;UBERON:0007282,4.12e-15,9;UBERON:0004290,4.12e-15,9;UBERON:0009618,4.12e-15,9;UBERON:0000383,1.11e-13,10;UBERON:0007524,1.65e-12,11;UBERON:0003077,1.65e-12,11;UBERON:0007285,1.65e-12,11|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.513602189793617,0.174840804837995,0,0,0,0,0,0.84877930359606,0,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53356935326434,3.1253413780952,5.23523743973798,111.175751237862,13.6609096991689,6.79714494243615,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.679913719975421,0.839708713941948,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:24726295..24726318,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:24726295..24726318,- | |||
|id=chr13:24726295..24726318,- | |||
|ontology_enrichment_celltype=CL:0000838!4.28e-21!12;CL:0000542!2.28e-19!13;CL:0000051!2.28e-19!13;CL:0000084!4.01e-18!11;CL:0000827!4.01e-18!11;CL:0000738!1.74e-14!17;CL:0002087!1.74e-14!17;CL:0000624!3.65e-14!8;CL:0000893!1.65e-13!6;CL:0002489!1.65e-13!6;CL:0000898!1.65e-13!6;CL:0000809!1.65e-13!6;CL:0000810!1.65e-13!6;CL:0000895!1.65e-13!6;CL:0000808!1.65e-13!6;CL:0000894!1.65e-13!6;CL:0000806!1.65e-13!6;CL:0000807!1.65e-13!6;CL:0000805!1.65e-13!6;CL:0002425!1.65e-13!6;CL:0002436!1.65e-13!6;CL:0002427!1.65e-13!6;CL:0002428!1.65e-13!6;CL:0002429!1.65e-13!6;CL:0002433!1.65e-13!6;CL:0002431!1.65e-13!6;CL:0002432!1.65e-13!6;CL:0000988!7.03e-13!32;CL:0002032!7.03e-13!32;CL:0000037!7.03e-13!32;CL:0000566!7.03e-13!32;CL:0000837!7.03e-13!32;CL:0000791!1.54e-12!9;CL:0000789!1.54e-12!9;CL:0002420!1.54e-12!9;CL:0002419!1.54e-12!9;CL:0000790!1.54e-12!9;CL:0002031!8.47e-12!25;CL:0000034!2.85e-09!97;CL:0002320!2.66e-08!46;CL:0000134!2.66e-08!46;CL:0000219!9.33e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.12e-15,9 | |||
|ontology_enrichment_disease=DOID:0060100!5.49e-12!3;DOID:4045!5.49e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-43,3;DOID:4045,1.75e-43,3;DOID:0050686,3.12e-22,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.66e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.12e-15,9;UBERON:0002036,4.12e-15,9;UBERON:0002385,4.12e-15,9;UBERON:0000486,4.12e-15,9;UBERON:0007503,4.12e-15,9;UBERON:0001015,4.12e-15,9;UBERON:0002329,4.12e-15,9;UBERON:0003082,4.12e-15,9;UBERON:0003059,4.12e-15,9;UBERON:0007282,4.12e-15,9;UBERON:0004290,4.12e-15,9;UBERON:0009618,4.12e-15,9;UBERON:0000383,1.11e-13,10;UBERON:0007524,1.65e-12,11;UBERON:0003077,1.65e-12,11;UBERON:0007285,1.65e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.513602189793617,0.174840804837995,0,0,0,0,0,0.84877930359606,0,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53356935326434,3.1253413780952,5.23523743973798,111.175751237862,13.6609096991689,6.79714494243615,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.679913719975421,0.839708713941948,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:24726295..24726318,- | |||
}} |
Revision as of 00:13, 13 September 2013
Short description: | p@chr13:24726295..24726318, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:24726295..24726318, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.12e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.12e-15 | 9 |
striated muscle tissue | 4.12e-15 | 9 |
muscle tissue | 4.12e-15 | 9 |
multilaminar epithelium | 4.12e-15 | 9 |
epithelial vesicle | 4.12e-15 | 9 |
musculature | 4.12e-15 | 9 |
somite | 4.12e-15 | 9 |
myotome | 4.12e-15 | 9 |
presomitic mesoderm | 4.12e-15 | 9 |
presumptive segmental plate | 4.12e-15 | 9 |
dermomyotome | 4.12e-15 | 9 |
trunk paraxial mesoderm | 4.12e-15 | 9 |
musculature of body | 1.11e-13 | 10 |
dense mesenchyme tissue | 1.65e-12 | 11 |
paraxial mesoderm | 1.65e-12 | 11 |
presumptive paraxial mesoderm | 1.65e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.75e-43 | 3 |
muscle cancer | 1.75e-43 | 3 |
organ system cancer | 3.12e-22 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.