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FFCP PHASE1:Mm9::chr13:3610282..3610308,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=105203|HGNC=|MCL_coexpression_id=276|UniProt=Q5DTT3,E9PYT9,Q3TAG2|association_with_transcript=45bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end|description=CAGE_peak_2_at_BC016423_5end|id=chr13:3610282..3610308,-|ontology_enrichment_celltype=CL:0000542!1.66e-08!13;CL:0000051!1.66e-08!13;CL:0000838!2.88e-08!12;CL:0000084!1.10e-07!11;CL:0000827!1.10e-07!11;CL:0000791!1.61e-07!9;CL:0000789!1.61e-07!9;CL:0002420!1.61e-07!9;CL:0002419!1.61e-07!9;CL:0000790!1.61e-07!9;CL:0000624!7.24e-07!8|ontology_enrichment_celltype_v019_2=CL:0000542,1.66e-08,13;CL:0000051,1.66e-08,13;CL:0000838,2.88e-08,12;CL:0000084,1.10e-07,11;CL:0000827,1.10e-07,11;CL:0000791,1.61e-07,9;CL:0000789,1.61e-07,9;CL:0002420,1.61e-07,9;CL:0002419,1.61e-07,9;CL:0000790,1.61e-07,9;CL:0000624,7.24e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!4.96e-10!24;UBERON:0002370!1.15e-09!23;UBERON:0000974!1.15e-09!23;UBERON:0004807!1.15e-09!23;UBERON:0005058!1.15e-09!23;UBERON:0003351!1.15e-09!23;UBERON:0009113!1.15e-09!23;UBERON:0003295!1.15e-09!23;UBERON:0009722!1.15e-09!23;UBERON:0005562!1.15e-09!23;UBERON:0007690!1.15e-09!23;UBERON:0006562!3.44e-09!24;UBERON:0001557!3.44e-09!24;UBERON:0001042!3.44e-09!24;UBERON:0008814!3.44e-09!24;UBERON:0009145!3.44e-09!24;UBERON:0004177!8.01e-08!29;UBERON:0001004!1.58e-07!42;UBERON:0000065!3.34e-07!41;UBERON:0004921!4.51e-07!126;UBERON:0004185!4.51e-07!126;UBERON:0005911!7.78e-07!69;UBERON:0001007!9.61e-07!128;UBERON:0001555!9.61e-07!128;UBERON:0007026!9.61e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0003408,4.96e-10,24;UBERON:0002370,1.15e-09,23;UBERON:0000974,1.15e-09,23;UBERON:0004807,1.15e-09,23;UBERON:0005058,1.15e-09,23;UBERON:0003351,1.15e-09,23;UBERON:0009113,1.15e-09,23;UBERON:0003295,1.15e-09,23;UBERON:0009722,1.15e-09,23;UBERON:0005562,1.15e-09,23;UBERON:0007690,1.15e-09,23;UBERON:0006562,3.44e-09,24;UBERON:0001557,3.44e-09,24;UBERON:0001042,3.44e-09,24;UBERON:0008814,3.44e-09,24;UBERON:0009145,3.44e-09,24;UBERON:0000153,1.57e-08,43;UBERON:0007811,4.02e-08,36;UBERON:0004177,8.01e-08,29;UBERON:0005057,8.01e-08,29;UBERON:0000077,1.08e-07,35;UBERON:0001004,1.58e-07,42;UBERON:0000065,3.34e-07,41;UBERON:0005911,7.77e-07,69|phase1_expression=7.04654927261093,7.32848356042658,10.0099832665698,9.0739263392049,9.5170188689806,12.7588246653036,13.783145795136,27.5032678930557,63.2141362460984,78.4116163178678,46.4000693891118,48.2621561921785,34.2401459862411,37.3285118329119,5.3297561890506,6.07425802169478,6.29605690315332,17.192688012024,21.8011949433125,16.9755860719212,8.1641558545027,8.24114894967348,8.35839325244593,5.75972722056264,5.27641346454491,13.7815671387605,6.03066794622705,7.75696437669201,6.08074942260396,10.837295579677,6.87364583031445,5.71527606113668,8.61090702618398,0,8.08784535303569,6.31691652362271,8.98345167554424,2.51118978442145,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,8.43508680436368,8.61703915365874,6.60768307782054,0,0.872100625521786,1.09843091367236,2.52758868796568,0.699932108126813,0,16.4426953936582,23.9369506863744,31.5928171193916,1.80081605225163,3.43840127926508,2.57836046138721,6.27181028664753,4.23192783417626,3.80298842103708,1.35537812827653,1.77858959222228,2.2497492932035,0.988866362566974,0.7104801149461,0.898800331555214,1.15265491596466,7.8804105354443,5.53524347159932,7.36137364729837,1.14260393761521,2.42955395046775,6.73699395682247,6.03826467414889,3.67687514644008,7.70811166995721,4.21368215681119,6.29786786350598,6.19865552331911,7.50198677539759,6.25096044668112,1.95428099300967,6.75315132038016,6.1119299110724,7.07108605136802,6.97621235915604,4.47358669980721,10.677393259979,4.6854367266207,9.56552812715537,4.30211938490693,4.75979933595425,5.39703191637817,7.14754059192436,6.72040330646003,6.46044332606059,4.94247935476367,1.81850203222008,3.18005617059306,7.46470124816407,10.2661181931454,17.8363667794652,21.3320010945999,2.16491041011214,2.53359865475099,2.52762222507392,6.62266502370548,40.1353719653116,8.16431764856536,4.3371331691534,4.26251669636998,3.92046345335299,4.06951129492081,6.46737889246376,6.1576629751541,11.1237735480468,7.22996784599558,9.73071607144862,5.66183974815932,4.19598885074748,3.87900202508178,20.5030937339934,4.9772735491963,5.44561437714983,8.17462576667492,5.99075622529601,4.79922184794726,4.57452817463033,5.69204429738326,7.77751024791665,10.6806199295935,6.43149984711423,5.8814555185976,5.194701113989,7.13861557498134,7.23059483337246,6.84238338355512,7.32895999457657,7.57590681191306,6.50602214813519,5.9774547152703,7.20248519221397,6.32960234910003,8.300452896462,6.14945857367279,5.90320864726292,6.98499100995342,3.01795190105979,8.88798576788751,9.32540958068929,6.79506770525482,8.61946472599353,8.358051996532,7.40815691068596,6.17006227137329,3.51106593656617,3.3455227924913,3.6941254921427,6.62802472113606,3.98694301967864,4.8616756594474,4.49814997611899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|EntrezGene=105203
|HGNC=
|MCL_coexpression_id=276
|UniProt=Q5DTT3,E9PYT9,Q3TAG2
|association_with_transcript=45bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end
|description=CAGE_peak_2_at_BC016423_5end
|id=chr13:3610282..3610308,-
|ontology_enrichment_celltype=CL:0000542!1.66e-08!13;CL:0000051!1.66e-08!13;CL:0000838!2.88e-08!12;CL:0000084!1.10e-07!11;CL:0000827!1.10e-07!11;CL:0000791!1.61e-07!9;CL:0000789!1.61e-07!9;CL:0002420!1.61e-07!9;CL:0002419!1.61e-07!9;CL:0000790!1.61e-07!9;CL:0000624!7.24e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000542,1.66e-08,13;CL:0000051,1.66e-08,13;CL:0000838,2.88e-08,12;CL:0000084,1.10e-07,11;CL:0000827,1.10e-07,11;CL:0000791,1.61e-07,9;CL:0000789,1.61e-07,9;CL:0002420,1.61e-07,9;CL:0002419,1.61e-07,9;CL:0000790,1.61e-07,9;CL:0000624,7.24e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003408!4.96e-10!24;UBERON:0002370!1.15e-09!23;UBERON:0000974!1.15e-09!23;UBERON:0004807!1.15e-09!23;UBERON:0005058!1.15e-09!23;UBERON:0003351!1.15e-09!23;UBERON:0009113!1.15e-09!23;UBERON:0003295!1.15e-09!23;UBERON:0009722!1.15e-09!23;UBERON:0005562!1.15e-09!23;UBERON:0007690!1.15e-09!23;UBERON:0006562!3.44e-09!24;UBERON:0001557!3.44e-09!24;UBERON:0001042!3.44e-09!24;UBERON:0008814!3.44e-09!24;UBERON:0009145!3.44e-09!24;UBERON:0004177!8.01e-08!29;UBERON:0001004!1.58e-07!42;UBERON:0000065!3.34e-07!41;UBERON:0004921!4.51e-07!126;UBERON:0004185!4.51e-07!126;UBERON:0005911!7.78e-07!69;UBERON:0001007!9.61e-07!128;UBERON:0001555!9.61e-07!128;UBERON:0007026!9.61e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0003408,4.96e-10,24;UBERON:0002370,1.15e-09,23;UBERON:0000974,1.15e-09,23;UBERON:0004807,1.15e-09,23;UBERON:0005058,1.15e-09,23;UBERON:0003351,1.15e-09,23;UBERON:0009113,1.15e-09,23;UBERON:0003295,1.15e-09,23;UBERON:0009722,1.15e-09,23;UBERON:0005562,1.15e-09,23;UBERON:0007690,1.15e-09,23;UBERON:0006562,3.44e-09,24;UBERON:0001557,3.44e-09,24;UBERON:0001042,3.44e-09,24;UBERON:0008814,3.44e-09,24;UBERON:0009145,3.44e-09,24;UBERON:0000153,1.57e-08,43;UBERON:0007811,4.02e-08,36;UBERON:0004177,8.01e-08,29;UBERON:0005057,8.01e-08,29;UBERON:0000077,1.08e-07,35;UBERON:0001004,1.58e-07,42;UBERON:0000065,3.34e-07,41;UBERON:0005911,7.77e-07,69
|phase1_expression=7.04654927261093,7.32848356042658,10.0099832665698,9.0739263392049,9.5170188689806,12.7588246653036,13.783145795136,27.5032678930557,63.2141362460984,78.4116163178678,46.4000693891118,48.2621561921785,34.2401459862411,37.3285118329119,5.3297561890506,6.07425802169478,6.29605690315332,17.192688012024,21.8011949433125,16.9755860719212,8.1641558545027,8.24114894967348,8.35839325244593,5.75972722056264,5.27641346454491,13.7815671387605,6.03066794622705,7.75696437669201,6.08074942260396,10.837295579677,6.87364583031445,5.71527606113668,8.61090702618398,0,8.08784535303569,6.31691652362271,8.98345167554424,2.51118978442145,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,8.43508680436368,8.61703915365874,6.60768307782054,0,0.872100625521786,1.09843091367236,2.52758868796568,0.699932108126813,0,16.4426953936582,23.9369506863744,31.5928171193916,1.80081605225163,3.43840127926508,2.57836046138721,6.27181028664753,4.23192783417626,3.80298842103708,1.35537812827653,1.77858959222228,2.2497492932035,0.988866362566974,0.7104801149461,0.898800331555214,1.15265491596466,7.8804105354443,5.53524347159932,7.36137364729837,1.14260393761521,2.42955395046775,6.73699395682247,6.03826467414889,3.67687514644008,7.70811166995721,4.21368215681119,6.29786786350598,6.19865552331911,7.50198677539759,6.25096044668112,1.95428099300967,6.75315132038016,6.1119299110724,7.07108605136802,6.97621235915604,4.47358669980721,10.677393259979,4.6854367266207,9.56552812715537,4.30211938490693,4.75979933595425,5.39703191637817,7.14754059192436,6.72040330646003,6.46044332606059,4.94247935476367,1.81850203222008,3.18005617059306,7.46470124816407,10.2661181931454,17.8363667794652,21.3320010945999,2.16491041011214,2.53359865475099,2.52762222507392,6.62266502370548,40.1353719653116,8.16431764856536,4.3371331691534,4.26251669636998,3.92046345335299,4.06951129492081,6.46737889246376,6.1576629751541,11.1237735480468,7.22996784599558,9.73071607144862,5.66183974815932,4.19598885074748,3.87900202508178,20.5030937339934,4.9772735491963,5.44561437714983,8.17462576667492,5.99075622529601,4.79922184794726,4.57452817463033,5.69204429738326,7.77751024791665,10.6806199295935,6.43149984711423,5.8814555185976,5.194701113989,7.13861557498134,7.23059483337246,6.84238338355512,7.32895999457657,7.57590681191306,6.50602214813519,5.9774547152703,7.20248519221397,6.32960234910003,8.300452896462,6.14945857367279,5.90320864726292,6.98499100995342,3.01795190105979,8.88798576788751,9.32540958068929,6.79506770525482,8.61946472599353,8.358051996532,7.40815691068596,6.17006227137329,3.51106593656617,3.3455227924913,3.6941254921427,6.62802472113606,3.98694301967864,4.8616756594474,4.49814997611899,2.95146347621106,4.16521204795921,3.72054311600653,6.17028823219124,3.50296027101508,5.26591519723137,4.26835406605648,4.45878452502207,3.21639972335731,6.14740322814942,3.89198614405078,5.25724871410318,13.1717903845484,8.26046957459495,6.61126416658861,8.74481827194459,6.50262681209228,7.34544529535932,7.66397393568702,6.67134131534611,5.51654315726422,7.59246498471219,6.75265714368445,6.53471542880701,7.75930240960488,7.79856348476481,5.39291645192533,6.48414149624083,9.16049856970089,3.60369011810855,5.71242563048644,10.1436962105772,5.09128319613286,6.59438456369928,6.8031745293609,5.75452487830741,5.60918562322488,4.55296310739987,7.52722699922983,6.22550516883013,3.33690211432188,4.32429789249047,4.04751802292737,3.44862206360455,4.10001171579109,4.07401362850272,6.90470729881945,6.16113861745134,3.56929837144506,10.0637744569148,7.44281895337007,4.99260276983297,6.56705082662491,7.17589654087649,5.30687873499704,11.2699446001629,6.63219941196697,7.33342393989116,5.09235257325564,5.63256595892405,5.3602002381381,8.56957107189649,8.39074685788535,7.40885177299098,8.41565820665345,7.97273843287435,9.17634562408133,7.7708241839653,8.96824163205372,6.03165135757089,5.4390568381871,6.88469982226651,7.45029215022778,3.69266356971921,4.68846746368813,3.11476396215683,3.53459298086122,5.04813151066011,5.46614242015294,9.26320610251035,7.88597033243422,8.91194696329577,8.20921939287614,5.26253912177363,7.01414058987149,8.69633111482352,9.3183181762324,10.3616262202036,5.52003371368491,7.4928001302645,10.0631775013247,15.9294166007955,5.34117399540959,6.04647113929502,5.28094223316515,5.31543407185391,6.14870295887855,10.3371317267288,6.90714086007261,6.77345018930971,8.53299246426703,12.6502330289999,9.28219889233682,27.235168460303,7.0223826672211,2.19909762430683,5.14408884075822,10.8177542521787,6.42127743367454,8.06290200950393,3.04464949114599,3.98941903708308,6.56679419677843,12.1290618930229,11.2122652000206,4.52100394748536,5.30753739367772,5.01363844813173,5.9090723908222,7.28702091574627,4.63563255026274,8.54354403989263,4.54051109519089,5.00025223898222,5.65105371014073,6.42462870288818,8.23601423543482,7.9889862097112,8.6769900440668,8.01559848065658,5.72802370809068,8.85740782027179,7.5228202836934,5.29226170026826,5.85447228840512,4.36725127492355,5.93403124093211,6.4469695465762,6.80565449158477,6.86959358446502,9.32008969630389,2.81846469342095,8.22341003241883,5.12921320417003,6.80579159204167,3.87479470433193,4.89972763923257,6.21993364822496,9.76532886329626,17.7212292079451,13.5287107662563,9.21696020025169,13.2724670663835,3.85177909051312,4.10843828659309,8.31493267057888,10.3835483487139,10.3314304486258,11.0579813558371,8.71368210330006,9.08698049533329,8.53516234535998,10.6875756245051,15.0085136339219,12.9885986214445,12.1551978268832,6.12172035761071,7.10355050797007,8.52281637790019,8.05846158547577,11.0118068598349,10.8855835761686,10.6227942075014,5.14484109789758,13.5424468089548,6.7770221114048,8.28585425712918,12.0308057822273,3.78077001156113,5.48066015816514,6.0431511791176,7.42524750254986,7.20513925158753,6.79713613476307,5.1776031175182,8.30298780673413,6.3843979744165,6.4878770186571,6.80698807791223,6.49800804146745,3.67687016900028,6.88964856185007,8.44743734679466,5.13470735346904,6.31743029409494,6.33698249725599,7.35642731405697,5.80577346313271,7.93911889820379,5.51380501973887,8.09699275181225,7.06894388263618,6.55891349576597,5.76920261124629,8.09594060739185,4.4573002810104,7.27650805253284,6.67621331852499,5.95920308192547,6.68176600948847,6.00763716030903,4.75612729469209,6.31367307450823,6.65440157844723,6.73370725989286,8.66035632306471,6.2057823896605,7.36615877705441,6.50734732981057,5.20847849649082,6.99469618226249,7.01794825336225,6.23126056740065,4.59091996965224,3.75005412503176,4.86922454802885
|short_description=p2@BC016423
}}

Revision as of 00:26, 13 September 2013

Short description:p2@BC016423
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_BC016423_5end
Coexpression cluster:MCL_coexpression_mm9:276
Association with transcript: 45bp_to_ENSMUST00000096069, ENSMUST00000110712, NM_134063, uc007pix.1, uc007piy.1_5end
EntrezGene:BC016423
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@BC016423

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.76
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.78
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E763.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F278.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E646.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F148.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E837.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A421.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B96.08
Ileum epithelium, pool2.CNhs13232.10253-104C110.84
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.59
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.88
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D910.68
Mouse Schwann, donor2.CNhs12573.11746-123F94.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H940.14
adrenal gland, adult.CNhs10508.49-24D78.16
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I36.16
amnion, adult pregnant day17.5.CNhs10488.583-22A811.12
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F110.68
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.23
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C68.30
eyeball, neonate N01.CNhs11140.1532-43E76.15
eyeball, neonate N02.CNhs11205.1551-44G85.90
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H28.89
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I94.86
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G14.46
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G113.17
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I58.74
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G76.80
kidney, neonate N10.CNhs11206.758-6D55.75
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H17.53
liver, adult pregnant day01.CNhs10466.508-5B26.23
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B111.27
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F87.33
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C68.39
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A49.18
lung, neonate N25.CNhs11119.1359-25C77.77
lung, neonate N30.CNhs11133.1394-42H28.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.26
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I710.36
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G610.06
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G827.24
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B910.82
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F58.06
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G36.57
prostate, adult.CNhs10470.859-1F812.13
skin, adult.CNhs10492.30-1C311.21
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H35.31
skin, neonate N06.CNhs11097.693-20I55.01
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G28.54
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H16.42
spleen, neonate N25.CNhs11099.1354-25G38.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.02
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E38.86
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I16.87
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F58.22
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B76.22
testis, neonate N07.CNhs11222.726-26I49.77
testis, neonate N10.CNhs11204.763-44D917.72
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B513.27
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C58.31
thymus, embryo E17.CNhs10581.478-18C110.38
thymus, embryo E18.CNhs10595.1273-19G410.33
thymus, neonate N02.CNhs11181.1541-43F811.06
thymus, neonate N03.CNhs11137.2104-43C78.71
thymus, neonate N06.CNhs11197.681-26C49.09
thymus, neonate N07.CNhs11211.713-19D38.54
thymus, neonate N10.CNhs11194.748-24E410.69
thymus, neonate N20.CNhs11186.820-7A215.01
thymus, neonate N25.CNhs11125.1362-25G712.99
thymus, neonate N30.CNhs11132.1393-42G212.16
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.06
urinary bladder, adult.CNhs10481.879-12E411.01
uterus, adult pregnant day19.CNhs10497.590-15F510.89
uterus, adult.CNhs10509.92-27E510.62
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I88.30
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.94
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B44.87





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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