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FFCP PHASE1:Mm9::chr13:52678451..52678492,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20963|HGNC=|MCL_coexpression_id=165|UniProt=P48025|association_with_transcript=-49bp_to_ENSMUST00000120135_5end|description=CAGE_peak_4_at_Syk_5end|id=chr13:52678451..52678492,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,6.12e-09,19;CL:0000763,6.66e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.15e-10!48;UBERON:0001474!3.20e-09!22;UBERON:0004765!3.20e-09!22;UBERON:0001434!3.20e-09!22;UBERON:0002371!4.29e-09!16;UBERON:0002204!4.80e-09!32;UBERON:0002390!2.20e-08!45;UBERON:0003061!2.20e-08!45;UBERON:0003081!5.18e-08!88;UBERON:0002405!1.82e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.61e-17,48;UBERON:0002405,4.61e-17,48;UBERON:0002390,7.95e-15,45;UBERON:0003061,7.95e-15,45;UBERON:0002371,6.61e-12,16;UBERON:0001474,1.79e-11,22;UBERON:0004765,1.79e-11,22;UBERON:0001434,1.79e-11,22;UBERON:0002204,2.65e-11,32;UBERON:0003081,2.08e-08,87|phase1_expression=0.320297694209588,3.83872948403297,4.09499315450582,1.20985684522732,0.500895729946347,7.05092942029937,4.20502753071946,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,3.66420737997229,5.4668322195253,1.39912375625629,23.6596624018678,23.4465681465813,27.585327366872,0.595303031057488,5.56029326724958,7.05239430675126,5.43974237497583,3.67054849707472,2.8711598205751,9.47676391549965,7.75696437669201,0.950117097281869,0.756090389279792,3.54768817048488,0,0,0,0.866554859253824,0.332469290716985,0.816677425049476,36.8307835048479,18.7520482685712,18.3233310390829,33.5291948177678,35.5183652178392,26.7030694167134,0,0.304130793658544,0.183546752161682,0.782391344348039,0,0,0,0.55994568650145,0,21.9795213935635,0,0.672187598284928,0.257259436035947,2.29226751951005,1.03134418455488,0,0,0,0,0,6.74924787961049,3.9554654502679,7.104801149461,3.29560121570245,0.768436610643109,0.311068836925433,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,1.10115880999389,0,0,0.395658863190582,0.274462930807229,0,0,0,0.15279824777681,0.294628585473668,0,0,0.757261933331841,0.453429360640713,0.579728977403356,0,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.14084341977668,0,0,0,0.865964164044856,0.253359865475099,0,1.59857431606684,6.47344709117929,1.33597925158342,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0.125666591329675,0.988779870937496,1.01219549843938,10.6153266233985,0.808834249737046,3.97514733228708,5.33362778448744,0,0,0.209446706813455,2.04365644166873,6.23038647430785,2.99951365496704,4.3203877204842,0,0,0,0,0.255715457330331,0.20778804455956,0,0.101839363850316,4.60305791257344,0.505445516867349,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0,0.348252166522167,0,0.995171334092466,2.1066395619397,5.40430604940902,3.6941254921427,1.24275463521301,0.938104239924385,0.900310307305074,0.946978942340841,1.37734962223183,0.617068451549513,0.697601834251224,0.268273401399619,1.05088808130453,0.987359099480883,1.14917224855367,0.56748166682099,0.584799949701329,0.878200461164203,1.07365135008297,0,0.205809224758569,0.991256348951394,0.793351699990633,0.213288250535234,0.232236671860439,0.644337306610467,1.00841762311671,0.22237804384487,0.570676878337677,0.949058123089023,0.988193728344065,0.754005626400808,1.39269530428806,0.38992817423824,1.79763881730844,0.432276099749388,2.38969527905241,0.758671603812327,0.571242563048644,1.1270773567308,0.814605311381257,0,0.561086559122548,0.758838445491087,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.982794975566015,0.674586337154561,1.42002084971952,2.17059443777175,1.01850340712568,1.72617682470486,2.59416362840057,1.37280706594041,0,1.86070473834252,1.24815069245824,0.252578877947112,0.358794827043824,1.4473305640901,2.40179147216586,0.189491411770485,0,0.509235257325564,0.704070744865506,1.67506257441816,1.42826184531608,3.12213836572478,1.26108115284953,0.664394068946325,1.59454768657487,2.13022309130459,2.07221978239075,2.02508682014116,31.6661696272472,5.4390568381871,0.491764273019036,1.10374698521893,0,0,0,0.757412781613119,0,0,0.215423397732799,0,0,0,0,0,0,0,0.851640511249612,0.534196811001766,0.325773918707152,1.31976098378028,0,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0.356497378384721,1.26414703174326,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0.469343416127421,0.42366414172764,0.661585194164886,0.8244312647074,0.645857706783622,0.241251699712623,0.716234064018819,0.492422699235184,1.7488850197791,0.18542530201051,6.32222258952055,1.03193433981611,2.96311243791539,2.82552685507037,6.01454601972511,4.11800711771741,4.58941760983409,4.89830083132803,6.35719879500349,0,0.158167996790568,0.203319467126849,0.756037385752609,0.836353184057875,0.436725127492355,0.269728692769641,0.826534557253359,1.83229159388821,2.85152941241944,1.24267862617385,0,0.747582730219894,0.165458490457098,0.583353565032143,0.774958940866387,0.337912250981556,0.469428954583016,0.2604087696879,0.104859344425711,0,0,3.16011120628178,2.22997736819181,1.43795340030758,1.55904987573354,1.61124026100733,0.39736270956253,1.80293174279953,1.77227432609493,1.71642964911851,1.905170166375,3.42809029465258,2.43644701849381,3.46362629905186,3.3894301632655,0.453460767230423,0.221985953374065,0,0.335769232728157,1.15913756419314,0.187682475451182,2.01466786693992,1.07184189539533,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.655490552289177,0.704276676453562,0.229741875822453,1.42888107384922,0.811190281613988,0.38581844092741,1.23625770240992,0.735994600671987,0.342869252385415,1.06485483695602,0.476872379894642,0.290692833264657,0.658765662907314,0.338458431566706,0.365855945745545,0,0.679020569229309,1.68342681497322,0.474540072496697,0.492522411877817,0.818462086339379,0.619747364743864,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,1.53030665655075,1.10295709559758,0.695603506861264|short_description=p4@Syk}}
|EntrezGene=20963
|HGNC=
|MCL_coexpression_id=165
|UniProt=P48025
|association_with_transcript=-49bp_to_ENSMUST00000120135_5end
|description=CAGE_peak_4_at_Syk_5end
|id=chr13:52678451..52678492,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000049,6.12e-09,19;CL:0000763,6.66e-07,16
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!9.15e-10!48;UBERON:0001474!3.20e-09!22;UBERON:0004765!3.20e-09!22;UBERON:0001434!3.20e-09!22;UBERON:0002371!4.29e-09!16;UBERON:0002204!4.80e-09!32;UBERON:0002390!2.20e-08!45;UBERON:0003061!2.20e-08!45;UBERON:0003081!5.18e-08!88;UBERON:0002405!1.82e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.61e-17,48;UBERON:0002405,4.61e-17,48;UBERON:0002390,7.95e-15,45;UBERON:0003061,7.95e-15,45;UBERON:0002371,6.61e-12,16;UBERON:0001474,1.79e-11,22;UBERON:0004765,1.79e-11,22;UBERON:0001434,1.79e-11,22;UBERON:0002204,2.65e-11,32;UBERON:0003081,2.08e-08,87
|phase1_expression=0.320297694209588,3.83872948403297,4.09499315450582,1.20985684522732,0.500895729946347,7.05092942029937,4.20502753071946,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,3.66420737997229,5.4668322195253,1.39912375625629,23.6596624018678,23.4465681465813,27.585327366872,0.595303031057488,5.56029326724958,7.05239430675126,5.43974237497583,3.67054849707472,2.8711598205751,9.47676391549965,7.75696437669201,0.950117097281869,0.756090389279792,3.54768817048488,0,0,0,0.866554859253824,0.332469290716985,0.816677425049476,36.8307835048479,18.7520482685712,18.3233310390829,33.5291948177678,35.5183652178392,26.7030694167134,0,0.304130793658544,0.183546752161682,0.782391344348039,0,0,0,0.55994568650145,0,21.9795213935635,0,0.672187598284928,0.257259436035947,2.29226751951005,1.03134418455488,0,0,0,0,0,6.74924787961049,3.9554654502679,7.104801149461,3.29560121570245,0.768436610643109,0.311068836925433,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,1.10115880999389,0,0,0.395658863190582,0.274462930807229,0,0,0,0.15279824777681,0.294628585473668,0,0,0.757261933331841,0.453429360640713,0.579728977403356,0,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.14084341977668,0,0,0,0.865964164044856,0.253359865475099,0,1.59857431606684,6.47344709117929,1.33597925158342,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0.125666591329675,0.988779870937496,1.01219549843938,10.6153266233985,0.808834249737046,3.97514733228708,5.33362778448744,0,0,0.209446706813455,2.04365644166873,6.23038647430785,2.99951365496704,4.3203877204842,0,0,0,0,0.255715457330331,0.20778804455956,0,0.101839363850316,4.60305791257344,0.505445516867349,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0,0.348252166522167,0,0.995171334092466,2.1066395619397,5.40430604940902,3.6941254921427,1.24275463521301,0.938104239924385,0.900310307305074,0.946978942340841,1.37734962223183,0.617068451549513,0.697601834251224,0.268273401399619,1.05088808130453,0.987359099480883,1.14917224855367,0.56748166682099,0.584799949701329,0.878200461164203,1.07365135008297,0,0.205809224758569,0.991256348951394,0.793351699990633,0.213288250535234,0.232236671860439,0.644337306610467,1.00841762311671,0.22237804384487,0.570676878337677,0.949058123089023,0.988193728344065,0.754005626400808,1.39269530428806,0.38992817423824,1.79763881730844,0.432276099749388,2.38969527905241,0.758671603812327,0.571242563048644,1.1270773567308,0.814605311381257,0,0.561086559122548,0.758838445491087,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.982794975566015,0.674586337154561,1.42002084971952,2.17059443777175,1.01850340712568,1.72617682470486,2.59416362840057,1.37280706594041,0,1.86070473834252,1.24815069245824,0.252578877947112,0.358794827043824,1.4473305640901,2.40179147216586,0.189491411770485,0,0.509235257325564,0.704070744865506,1.67506257441816,1.42826184531608,3.12213836572478,1.26108115284953,0.664394068946325,1.59454768657487,2.13022309130459,2.07221978239075,2.02508682014116,31.6661696272472,5.4390568381871,0.491764273019036,1.10374698521893,0,0,0,0.757412781613119,0,0,0.215423397732799,0,0,0,0,0,0,0,0.851640511249612,0.534196811001766,0.325773918707152,1.31976098378028,0,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0.356497378384721,1.26414703174326,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0.469343416127421,0.42366414172764,0.661585194164886,0.8244312647074,0.645857706783622,0.241251699712623,0.716234064018819,0.492422699235184,1.7488850197791,0.18542530201051,6.32222258952055,1.03193433981611,2.96311243791539,2.82552685507037,6.01454601972511,4.11800711771741,4.58941760983409,4.89830083132803,6.35719879500349,0,0.158167996790568,0.203319467126849,0.756037385752609,0.836353184057875,0.436725127492355,0.269728692769641,0.826534557253359,1.83229159388821,2.85152941241944,1.24267862617385,0,0.747582730219894,0.165458490457098,0.583353565032143,0.774958940866387,0.337912250981556,0.469428954583016,0.2604087696879,0.104859344425711,0,0,3.16011120628178,2.22997736819181,1.43795340030758,1.55904987573354,1.61124026100733,0.39736270956253,1.80293174279953,1.77227432609493,1.71642964911851,1.905170166375,3.42809029465258,2.43644701849381,3.46362629905186,3.3894301632655,0.453460767230423,0.221985953374065,0,0.335769232728157,1.15913756419314,0.187682475451182,2.01466786693992,1.07184189539533,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.655490552289177,0.704276676453562,0.229741875822453,1.42888107384922,0.811190281613988,0.38581844092741,1.23625770240992,0.735994600671987,0.342869252385415,1.06485483695602,0.476872379894642,0.290692833264657,0.658765662907314,0.338458431566706,0.365855945745545,0,0.679020569229309,1.68342681497322,0.474540072496697,0.492522411877817,0.818462086339379,0.619747364743864,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,1.53030665655075,1.10295709559758,0.695603506861264
|short_description=p4@Syk
}}

Revision as of 00:45, 13 September 2013

Short description:p4@Syk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Syk_5end
Coexpression cluster:MCL_coexpression_mm9:165
Association with transcript: -49bp_to_ENSMUST00000120135_5end
EntrezGene:Syk
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Syk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.66
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.45
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.59
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G836.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H318.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G933.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H235.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.98
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.32
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.60
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A131.67
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G26.32
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.36
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor6.12e-0919
myeloid cell6.66e-0716

Uber anatomy
Ontology termp-valuen
hemolymphoid system4.61e-1748
immune system4.61e-1748
hematopoietic system7.95e-1545
blood island7.95e-1545
bone marrow6.61e-1216
bone element1.79e-1122
skeletal element1.79e-1122
skeletal system1.79e-1122
musculoskeletal system2.65e-1132
lateral plate mesoderm2.08e-0887







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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