FFCP PHASE1:Mm9::chr13:73484734..73484745,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=432777|HGNC=|MCL_coexpression_id=479|UniProt=|association_with_transcript=86bp_to_NR_045293,uc007rdj.1_5end|description=CAGE_peak_3_at_D630045M09Rik_5end|id=chr13:73484734..73484745,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,6.50e-14,1;CL:0002078,6.50e-14,1;CL:0000115,6.50e-14,1;CL:0002262,6.50e-14,1;CL:1000398,6.50e-14,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!4.39e-14!43;UBERON:0002113!2.13e-10!14;UBERON:0003918!2.13e-10!14;UBERON:0005095!2.13e-10!14;UBERON:0007687!2.13e-10!14;UBERON:0005177!8.02e-10!85;UBERON:0002100!5.65e-09!98;UBERON:0006554!8.81e-09!16;UBERON:0004535!1.15e-08!23;UBERON:0001009!1.15e-08!23;UBERON:0005178!1.75e-08!17;UBERON:0005181!1.75e-08!17;UBERON:0002224!1.75e-08!17;UBERON:0000915!1.75e-08!17;UBERON:0008947!1.75e-08!17;UBERON:0003258!1.75e-08!17;UBERON:0007100!2.59e-08!18;UBERON:0000948!2.59e-08!18;UBERON:0005498!2.59e-08!18;UBERON:0004140!2.59e-08!18;UBERON:0009881!2.59e-08!18;UBERON:0004141!2.59e-08!18;UBERON:0003084!2.59e-08!18;UBERON:0007005!2.59e-08!18;UBERON:0004139!2.59e-08!18;UBERON:0004291!2.59e-08!18;UBERON:0001008!4.06e-08!17;UBERON:0009569!1.37e-07!66;UBERON:0004872!3.68e-07!33;UBERON:0002048!4.05e-07!14;UBERON:0000117!4.05e-07!14;UBERON:0000171!4.05e-07!14;UBERON:0000170!4.05e-07!14;UBERON:0005597!4.05e-07!14;UBERON:0000118!4.05e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0006554,1.01e-17,18;UBERON:0001008,8.23e-17,19;UBERON:0002113,6.73e-15,14;UBERON:0003918,6.73e-15,14;UBERON:0011143,6.73e-15,14;UBERON:0005095,6.73e-15,14;UBERON:0007687,6.73e-15,14;UBERON:0002394,6.50e-14,1;UBERON:0001281,6.50e-14,1;UBERON:0000353,6.50e-14,1;UBERON:0003497,6.50e-14,1;UBERON:0003909,6.50e-14,1;UBERON:0003928,6.50e-14,1;UBERON:0003835,6.50e-14,1;UBERON:0003513,6.50e-14,1;UBERON:0001280,6.50e-14,1;UBERON:0004647,6.50e-14,1;UBERON:0002294,6.50e-14,1;UBERON:0001173,6.50e-14,1;UBERON:0004912,6.50e-14,1;UBERON:0005171,6.50e-14,1;UBERON:0000489,4.25e-10,21;UBERON:0001987,2.03e-07,2;UBERON:0003124,2.03e-07,2;UBERON:0004340,2.03e-07,2;UBERON:0005172,9.97e-07,49;UBERON:0005173,9.97e-07,49;UBERON:0002417,9.97e-07,49;UBERON:0000916,9.97e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.462801338662135,0.232533944750408,0.536546802799238,0.700592054203017,0.987359099480883,0.656669856316381,0.162137619091711,0.292399974850665,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.969762435838129,0.841629838683823,2.71917109634306,1.77132177575523,3.1399745568275,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0.325929952884052,0.339490171550376,0,0,0.476087281772027,0.390267295715598,0.315270288212382,0,0.159454768657487,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@D630045M09Rik}} | ||
|EntrezGene=432777 | |||
|HGNC= | |||
|MCL_coexpression_id=479 | |||
|UniProt= | |||
|association_with_transcript=86bp_to_NR_045293,uc007rdj.1_5end | |||
|description=CAGE_peak_3_at_D630045M09Rik_5end | |||
|id=chr13:73484734..73484745,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.50e-14,1;CL:0002078,6.50e-14,1;CL:0000115,6.50e-14,1;CL:0002262,6.50e-14,1;CL:1000398,6.50e-14,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!4.39e-14!43;UBERON:0002113!2.13e-10!14;UBERON:0003918!2.13e-10!14;UBERON:0005095!2.13e-10!14;UBERON:0007687!2.13e-10!14;UBERON:0005177!8.02e-10!85;UBERON:0002100!5.65e-09!98;UBERON:0006554!8.81e-09!16;UBERON:0004535!1.15e-08!23;UBERON:0001009!1.15e-08!23;UBERON:0005178!1.75e-08!17;UBERON:0005181!1.75e-08!17;UBERON:0002224!1.75e-08!17;UBERON:0000915!1.75e-08!17;UBERON:0008947!1.75e-08!17;UBERON:0003258!1.75e-08!17;UBERON:0007100!2.59e-08!18;UBERON:0000948!2.59e-08!18;UBERON:0005498!2.59e-08!18;UBERON:0004140!2.59e-08!18;UBERON:0009881!2.59e-08!18;UBERON:0004141!2.59e-08!18;UBERON:0003084!2.59e-08!18;UBERON:0007005!2.59e-08!18;UBERON:0004139!2.59e-08!18;UBERON:0004291!2.59e-08!18;UBERON:0001008!4.06e-08!17;UBERON:0009569!1.37e-07!66;UBERON:0004872!3.68e-07!33;UBERON:0002048!4.05e-07!14;UBERON:0000117!4.05e-07!14;UBERON:0000171!4.05e-07!14;UBERON:0000170!4.05e-07!14;UBERON:0005597!4.05e-07!14;UBERON:0000118!4.05e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,1.01e-17,18;UBERON:0001008,8.23e-17,19;UBERON:0002113,6.73e-15,14;UBERON:0003918,6.73e-15,14;UBERON:0011143,6.73e-15,14;UBERON:0005095,6.73e-15,14;UBERON:0007687,6.73e-15,14;UBERON:0002394,6.50e-14,1;UBERON:0001281,6.50e-14,1;UBERON:0000353,6.50e-14,1;UBERON:0003497,6.50e-14,1;UBERON:0003909,6.50e-14,1;UBERON:0003928,6.50e-14,1;UBERON:0003835,6.50e-14,1;UBERON:0003513,6.50e-14,1;UBERON:0001280,6.50e-14,1;UBERON:0004647,6.50e-14,1;UBERON:0002294,6.50e-14,1;UBERON:0001173,6.50e-14,1;UBERON:0004912,6.50e-14,1;UBERON:0005171,6.50e-14,1;UBERON:0000489,4.25e-10,21;UBERON:0001987,2.03e-07,2;UBERON:0003124,2.03e-07,2;UBERON:0004340,2.03e-07,2;UBERON:0005172,9.97e-07,49;UBERON:0005173,9.97e-07,49;UBERON:0002417,9.97e-07,49;UBERON:0000916,9.97e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.462801338662135,0.232533944750408,0.536546802799238,0.700592054203017,0.987359099480883,0.656669856316381,0.162137619091711,0.292399974850665,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.969762435838129,0.841629838683823,2.71917109634306,1.77132177575523,3.1399745568275,1.48076596706161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0.325929952884052,0.339490171550376,0,0,0.476087281772027,0.390267295715598,0.315270288212382,0,0.159454768657487,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@D630045M09Rik | |||
}} |
Revision as of 01:05, 13 September 2013
Short description: | p3@D630045M09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_D630045M09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:479 |
Association with transcript: | 86bp_to_NR_045293, uc007rdj.1_5end |
EntrezGene: | D630045M09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.50e-14 | 1 |
meso-epithelial cell | 6.50e-14 | 1 |
endothelial cell | 6.50e-14 | 1 |
endothelial cell of sinusoid | 6.50e-14 | 1 |
endothelial cell of hepatic sinusoid | 6.50e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 1.01e-17 | 18 |
renal system | 8.23e-17 | 19 |
kidney | 6.73e-15 | 14 |
kidney mesenchyme | 6.73e-15 | 14 |
upper urinary tract | 6.73e-15 | 14 |
kidney rudiment | 6.73e-15 | 14 |
kidney field | 6.73e-15 | 14 |
bile duct | 6.50e-14 | 1 |
hepatic sinusoid | 6.50e-14 | 1 |
parenchyma | 6.50e-14 | 1 |
abdomen blood vessel | 6.50e-14 | 1 |
sinusoid | 6.50e-14 | 1 |
digestive system duct | 6.50e-14 | 1 |
abdominal segment blood vessel | 6.50e-14 | 1 |
trunk blood vessel | 6.50e-14 | 1 |
liver parenchyma | 6.50e-14 | 1 |
liver lobule | 6.50e-14 | 1 |
biliary system | 6.50e-14 | 1 |
biliary tree | 6.50e-14 | 1 |
biliary bud | 6.50e-14 | 1 |
hepatic duct | 6.50e-14 | 1 |
cavitated compound organ | 4.25e-10 | 21 |
placenta | 2.03e-07 | 2 |
chorion | 2.03e-07 | 2 |
allantois | 2.03e-07 | 2 |
abdomen element | 9.97e-07 | 49 |
abdominal segment element | 9.97e-07 | 49 |
abdominal segment of trunk | 9.97e-07 | 49 |
abdomen | 9.97e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.