FFCP PHASE1:Mm9::chr14:48339462..48339479,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=218|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:48339462..48339479,+|id=chr14:48339462..48339479,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!6.38e-12!6;UBERON:0000473!7.17e-11!14;UBERON:0003135!4.62e-10!15;UBERON:0003101!2.36e-09!16;UBERON:0000079!2.36e-09!16;UBERON:0004176!9.95e-09!17;UBERON:0009196!9.95e-09!17;UBERON:0009117!9.95e-09!17;UBERON:0000014!1.86e-08!5;UBERON:0001003!1.86e-08!5;UBERON:0002097!1.86e-08!5;UBERON:0002199!1.86e-08!5;UBERON:0007029!1.86e-08!5;UBERON:0007376!1.86e-08!5;UBERON:0002416!1.86e-08!5;UBERON:0007383!1.86e-08!5;UBERON:0000991!3.57e-08!18;UBERON:0005564!3.57e-08!18;UBERON:0004733!6.82e-08!6;UBERON:0004732!6.82e-08!6;UBERON:0002028!6.82e-08!6;UBERON:0007277!6.82e-08!6;UBERON:0001049!9.11e-08!52;UBERON:0005068!9.11e-08!52;UBERON:0006241!9.11e-08!52;UBERON:0007135!9.11e-08!52;UBERON:0001896!3.73e-07!2;UBERON:0005290!3.73e-07!2;UBERON:0010096!3.73e-07!2;UBERON:0002616!4.64e-07!49;UBERON:0000955!7.27e-07!50;UBERON:0006238!7.27e-07!50;UBERON:0002950!9.75e-07!4;UBERON:0001891!9.75e-07!4;UBERON:0009616!9.75e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.55e-44,2;UBERON:0002298,4.55e-44,2;UBERON:0005290,4.55e-44,2;UBERON:0010096,4.55e-44,2;UBERON:0003076,2.99e-17,12;UBERON:0003057,2.99e-17,12;UBERON:0004733,1.58e-15,6;UBERON:0004732,1.58e-15,6;UBERON:0002028,1.58e-15,6;UBERON:0007277,1.58e-15,6;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0.915001205637253,0,0.695297280769106,0,1.45451631191692,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13761887960934,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,10.0129663085675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr14:48339462..48339479,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:48339462..48339479,+ | |||
|id=chr14:48339462..48339479,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!6.38e-12!6;UBERON:0000473!7.17e-11!14;UBERON:0003135!4.62e-10!15;UBERON:0003101!2.36e-09!16;UBERON:0000079!2.36e-09!16;UBERON:0004176!9.95e-09!17;UBERON:0009196!9.95e-09!17;UBERON:0009117!9.95e-09!17;UBERON:0000014!1.86e-08!5;UBERON:0001003!1.86e-08!5;UBERON:0002097!1.86e-08!5;UBERON:0002199!1.86e-08!5;UBERON:0007029!1.86e-08!5;UBERON:0007376!1.86e-08!5;UBERON:0002416!1.86e-08!5;UBERON:0007383!1.86e-08!5;UBERON:0000991!3.57e-08!18;UBERON:0005564!3.57e-08!18;UBERON:0004733!6.82e-08!6;UBERON:0004732!6.82e-08!6;UBERON:0002028!6.82e-08!6;UBERON:0007277!6.82e-08!6;UBERON:0001049!9.11e-08!52;UBERON:0005068!9.11e-08!52;UBERON:0006241!9.11e-08!52;UBERON:0007135!9.11e-08!52;UBERON:0001896!3.73e-07!2;UBERON:0005290!3.73e-07!2;UBERON:0010096!3.73e-07!2;UBERON:0002616!4.64e-07!49;UBERON:0000955!7.27e-07!50;UBERON:0006238!7.27e-07!50;UBERON:0002950!9.75e-07!4;UBERON:0001891!9.75e-07!4;UBERON:0009616!9.75e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.55e-44,2;UBERON:0002298,4.55e-44,2;UBERON:0005290,4.55e-44,2;UBERON:0010096,4.55e-44,2;UBERON:0003076,2.99e-17,12;UBERON:0003057,2.99e-17,12;UBERON:0004733,1.58e-15,6;UBERON:0004732,1.58e-15,6;UBERON:0002028,1.58e-15,6;UBERON:0007277,1.58e-15,6;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0.915001205637253,0,0.695297280769106,0,1.45451631191692,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13761887960934,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,10.0129663085675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr14:48339462..48339479,+ | |||
}} |
Revision as of 02:12, 13 September 2013
Short description: | p@chr14:48339462..48339479, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:48339462..48339479, + |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.55e-44 | 2 |
brainstem | 4.55e-44 | 2 |
myelencephalon | 4.55e-44 | 2 |
future myelencephalon | 4.55e-44 | 2 |
posterior neural tube | 2.99e-17 | 12 |
chordal neural plate | 2.99e-17 | 12 |
segmental subdivision of hindbrain | 1.58e-15 | 6 |
segmental subdivision of nervous system | 1.58e-15 | 6 |
hindbrain | 1.58e-15 | 6 |
presumptive hindbrain | 1.58e-15 | 6 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.