FFCP PHASE1:Mm9::chr14:64225851..64225866,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=30|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:64225851..64225866,+|id=chr14:64225851..64225866,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,3.64e-07,3;CL:0002614,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.66e-12!71;UBERON:0003075!1.66e-12!71;UBERON:0007284!1.66e-12!71;UBERON:0004121!4.26e-11!102;UBERON:0000924!4.26e-11!102;UBERON:0006601!4.26e-11!102;UBERON:0001049!4.66e-11!52;UBERON:0005068!4.66e-11!52;UBERON:0006241!4.66e-11!52;UBERON:0007135!4.66e-11!52;UBERON:0002616!4.86e-11!49;UBERON:0000955!1.15e-10!50;UBERON:0006238!1.15e-10!50;UBERON:0000073!2.26e-10!75;UBERON:0001016!2.26e-10!75;UBERON:0000033!2.51e-10!63;UBERON:0001017!3.33e-10!73;UBERON:0005743!3.33e-10!73;UBERON:0002298!1.45e-08!6;UBERON:0007811!8.09e-08!86;UBERON:0003080!1.11e-07!40;UBERON:0003056!1.21e-07!49;UBERON:0002780!4.98e-07!39;UBERON:0001890!4.98e-07!39;UBERON:0006240!4.98e-07!39;UBERON:0000153!5.65e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.43e-18,4;UBERON:0002680,1.43e-18,4;UBERON:0001895,1.43e-18,4;UBERON:0010092,1.43e-18,4;UBERON:0006215,1.43e-18,4;UBERON:0004733,9.45e-13,6;UBERON:0004732,9.45e-13,6;UBERON:0002028,9.45e-13,6;UBERON:0007277,9.45e-13,6;UBERON:0002038,4.77e-07,3;UBERON:0009663,4.77e-07,3;UBERON:0009661,4.77e-07,3;UBERON:0000125,4.77e-07,3;UBERON:0002308,4.77e-07,3;UBERON:0003076,7.23e-07,12;UBERON:0003057,7.23e-07,12|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.837548997004143,1.12552522006336,0.61119299110724,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,7.11066703153331,0,0,0,0,0,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0,0,0,0,6.73395833126558,7.54008144528438,0,0,0,0,0.299581278809645,0.915001205637253,0,0.347648640384553,0.767146371990992,0.41557608911912,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p@chr14:64225851..64225866,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:64225851..64225866,+ | |||
|id=chr14:64225851..64225866,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,3.64e-07,3;CL:0002614,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.66e-12!71;UBERON:0003075!1.66e-12!71;UBERON:0007284!1.66e-12!71;UBERON:0004121!4.26e-11!102;UBERON:0000924!4.26e-11!102;UBERON:0006601!4.26e-11!102;UBERON:0001049!4.66e-11!52;UBERON:0005068!4.66e-11!52;UBERON:0006241!4.66e-11!52;UBERON:0007135!4.66e-11!52;UBERON:0002616!4.86e-11!49;UBERON:0000955!1.15e-10!50;UBERON:0006238!1.15e-10!50;UBERON:0000073!2.26e-10!75;UBERON:0001016!2.26e-10!75;UBERON:0000033!2.51e-10!63;UBERON:0001017!3.33e-10!73;UBERON:0005743!3.33e-10!73;UBERON:0002298!1.45e-08!6;UBERON:0007811!8.09e-08!86;UBERON:0003080!1.11e-07!40;UBERON:0003056!1.21e-07!49;UBERON:0002780!4.98e-07!39;UBERON:0001890!4.98e-07!39;UBERON:0006240!4.98e-07!39;UBERON:0000153!5.65e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.43e-18,4;UBERON:0002680,1.43e-18,4;UBERON:0001895,1.43e-18,4;UBERON:0010092,1.43e-18,4;UBERON:0006215,1.43e-18,4;UBERON:0004733,9.45e-13,6;UBERON:0004732,9.45e-13,6;UBERON:0002028,9.45e-13,6;UBERON:0007277,9.45e-13,6;UBERON:0002038,4.77e-07,3;UBERON:0009663,4.77e-07,3;UBERON:0009661,4.77e-07,3;UBERON:0000125,4.77e-07,3;UBERON:0002308,4.77e-07,3;UBERON:0003076,7.23e-07,12;UBERON:0003057,7.23e-07,12 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.837548997004143,1.12552522006336,0.61119299110724,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,7.11066703153331,0,0,0,0,0,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0,0,0,0,6.73395833126558,7.54008144528438,0,0,0,0,0.299581278809645,0.915001205637253,0,0.347648640384553,0.767146371990992,0.41557608911912,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0.526139422875686,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr14:64225851..64225866,+ | |||
}} |
Revision as of 02:45, 13 September 2013
Short description: | p@chr14:64225851..64225866, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:64225851..64225866, + |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 3.64e-07 | 3 |
neuron of the substantia nigra | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.43e-18 | 4 |
regional part of metencephalon | 1.43e-18 | 4 |
metencephalon | 1.43e-18 | 4 |
future metencephalon | 1.43e-18 | 4 |
rhombic lip | 1.43e-18 | 4 |
segmental subdivision of hindbrain | 9.45e-13 | 6 |
segmental subdivision of nervous system | 9.45e-13 | 6 |
hindbrain | 9.45e-13 | 6 |
presumptive hindbrain | 9.45e-13 | 6 |
substantia nigra | 4.77e-07 | 3 |
telencephalic nucleus | 4.77e-07 | 3 |
midbrain nucleus | 4.77e-07 | 3 |
neural nucleus | 4.77e-07 | 3 |
nucleus of brain | 4.77e-07 | 3 |
posterior neural tube | 7.23e-07 | 12 |
chordal neural plate | 7.23e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.