FFCP PHASE1:Mm9::chr14:68705447..68705460,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=270|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:68705447..68705460,-|id=chr14:68705447..68705460,-|ontology_enrichment_celltype=CL:0000117!3.07e-11!23;CL:0000337!3.07e-11!23;CL:0000540!5.10e-08!33;CL:0000047!5.10e-08!33;CL:0000031!5.10e-08!33;CL:0000404!5.10e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.54e-20,23;CL:0000337,2.54e-20,23;CL:0000540,1.32e-13,33;CL:0000047,1.32e-13,33;CL:0000031,1.32e-13,33;CL:0000404,1.32e-13,33;CL:0002614,1.65e-13,3;CL:0002612,5.12e-13,3;CL:0002610,6.17e-13,3;CL:0000393,3.17e-11,39;CL:0000211,3.17e-11,39;CL:0002319,5.25e-10,43;CL:0000221,9.77e-10,44;CL:0000133,9.77e-10,44;CL:0002611,1.25e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.45e-24!71;UBERON:0003075!4.45e-24!71;UBERON:0007284!4.45e-24!71;UBERON:0004121!2.12e-21!102;UBERON:0000924!2.12e-21!102;UBERON:0006601!2.12e-21!102;UBERON:0000033!7.39e-19!63;UBERON:0000073!3.55e-18!75;UBERON:0001016!3.55e-18!75;UBERON:0001017!3.83e-18!73;UBERON:0005743!3.83e-18!73;UBERON:0001049!4.12e-18!52;UBERON:0005068!4.12e-18!52;UBERON:0006241!4.12e-18!52;UBERON:0007135!4.12e-18!52;UBERON:0003056!2.13e-16!49;UBERON:0002616!3.52e-15!49;UBERON:0000955!1.13e-14!50;UBERON:0006238!1.13e-14!50;UBERON:0003080!1.47e-11!40;UBERON:0002020!2.19e-11!34;UBERON:0002780!8.97e-11!39;UBERON:0001890!8.97e-11!39;UBERON:0006240!8.97e-11!39;UBERON:0007811!1.55e-10!86;UBERON:0000153!1.13e-08!94;UBERON:0002240!1.67e-08!6;UBERON:0005174!1.67e-08!6;UBERON:0001137!1.67e-08!6;UBERON:0002298!1.71e-08!6;UBERON:0003076!8.23e-08!12;UBERON:0003057!8.23e-08!12;UBERON:0001948!1.95e-07!5;UBERON:0002315!1.95e-07!5;UBERON:0002791!4.57e-07!29;UBERON:0003528!4.57e-07!29;UBERON:0001893!4.57e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-24,54;UBERON:0002240,1.64e-24,6;UBERON:0005174,1.64e-24,6;UBERON:0001137,1.64e-24,6;UBERON:0003076,3.16e-21,12;UBERON:0003057,3.16e-21,12;UBERON:0001948,5.54e-21,5;UBERON:0002315,5.54e-21,5;UBERON:0001049,5.21e-20,52;UBERON:0005068,5.21e-20,52;UBERON:0006241,5.21e-20,52;UBERON:0007135,5.21e-20,52;UBERON:0001017,1.96e-19,73;UBERON:0001016,7.85e-19,75;UBERON:0002020,2.51e-18,34;UBERON:0002346,1.03e-15,64;UBERON:0003075,1.03e-15,64;UBERON:0007284,1.03e-15,64;UBERON:0004121,3.46e-14,95;UBERON:0000924,3.46e-14,95;UBERON:0006601,3.46e-14,95;UBERON:0002038,1.65e-13,3;UBERON:0009663,1.65e-13,3;UBERON:0009661,1.65e-13,3;UBERON:0000125,1.65e-13,3;UBERON:0002308,1.65e-13,3;UBERON:0010371,2.06e-13,73;UBERON:0002257,5.12e-13,3;UBERON:0004684,6.17e-13,3;UBERON:0002275,6.17e-13,3;UBERON:0002950,2.98e-10,4;UBERON:0001891,2.98e-10,4;UBERON:0009616,2.98e-10,4;UBERON:0010286,2.98e-10,4;UBERON:0010314,5.02e-10,92;UBERON:0002256,1.25e-09,2;UBERON:0001896,2.02e-09,2;UBERON:0002298,2.02e-09,2;UBERON:0005290,2.02e-09,2;UBERON:0010096,2.02e-09,2;UBERON:0002616,6.05e-09,46;UBERON:0000489,8.50e-09,21;UBERON:0000955,1.03e-08,47;UBERON:0006238,1.03e-08,47;UBERON:0003528,5.70e-08,29;UBERON:0002791,5.70e-08,29;UBERON:0001893,5.70e-08,29;UBERON:0000025,1.66e-07,114;UBERON:0002780,4.11e-07,39;UBERON:0001890,4.11e-07,39;UBERON:0006240,4.11e-07,39;UBERON:0003080,6.68e-07,40;UBERON:0004111,8.18e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,4.57041575046086,4.19650227808066,0.489963196859816,0,0,2.20231761998777,2.93680877595932,2.4577045320999,0,0.365950574409639,0,11.1673199600552,5.06486349028512,1.68078072554491,5.59794312399969,3.55929201997757,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0.457500602818626,0,1.04294592115366,1.53429274398198,0.83115217823824,1.46017136760982,0,0,0,0,0.260240885925407,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.2562274405697,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.8679856575427,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.388076051348264,0,0,0.535106452806212,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,5.499301834998,0,1.5107877947794,0.675022500231806,0,1.81256963593682,0,0.726511433089237,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p@chr14:68705447..68705460,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:68705447..68705460,- | |||
|id=chr14:68705447..68705460,- | |||
|ontology_enrichment_celltype=CL:0000117!3.07e-11!23;CL:0000337!3.07e-11!23;CL:0000540!5.10e-08!33;CL:0000047!5.10e-08!33;CL:0000031!5.10e-08!33;CL:0000404!5.10e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.54e-20,23;CL:0000337,2.54e-20,23;CL:0000540,1.32e-13,33;CL:0000047,1.32e-13,33;CL:0000031,1.32e-13,33;CL:0000404,1.32e-13,33;CL:0002614,1.65e-13,3;CL:0002612,5.12e-13,3;CL:0002610,6.17e-13,3;CL:0000393,3.17e-11,39;CL:0000211,3.17e-11,39;CL:0002319,5.25e-10,43;CL:0000221,9.77e-10,44;CL:0000133,9.77e-10,44;CL:0002611,1.25e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.45e-24!71;UBERON:0003075!4.45e-24!71;UBERON:0007284!4.45e-24!71;UBERON:0004121!2.12e-21!102;UBERON:0000924!2.12e-21!102;UBERON:0006601!2.12e-21!102;UBERON:0000033!7.39e-19!63;UBERON:0000073!3.55e-18!75;UBERON:0001016!3.55e-18!75;UBERON:0001017!3.83e-18!73;UBERON:0005743!3.83e-18!73;UBERON:0001049!4.12e-18!52;UBERON:0005068!4.12e-18!52;UBERON:0006241!4.12e-18!52;UBERON:0007135!4.12e-18!52;UBERON:0003056!2.13e-16!49;UBERON:0002616!3.52e-15!49;UBERON:0000955!1.13e-14!50;UBERON:0006238!1.13e-14!50;UBERON:0003080!1.47e-11!40;UBERON:0002020!2.19e-11!34;UBERON:0002780!8.97e-11!39;UBERON:0001890!8.97e-11!39;UBERON:0006240!8.97e-11!39;UBERON:0007811!1.55e-10!86;UBERON:0000153!1.13e-08!94;UBERON:0002240!1.67e-08!6;UBERON:0005174!1.67e-08!6;UBERON:0001137!1.67e-08!6;UBERON:0002298!1.71e-08!6;UBERON:0003076!8.23e-08!12;UBERON:0003057!8.23e-08!12;UBERON:0001948!1.95e-07!5;UBERON:0002315!1.95e-07!5;UBERON:0002791!4.57e-07!29;UBERON:0003528!4.57e-07!29;UBERON:0001893!4.57e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-24,54;UBERON:0002240,1.64e-24,6;UBERON:0005174,1.64e-24,6;UBERON:0001137,1.64e-24,6;UBERON:0003076,3.16e-21,12;UBERON:0003057,3.16e-21,12;UBERON:0001948,5.54e-21,5;UBERON:0002315,5.54e-21,5;UBERON:0001049,5.21e-20,52;UBERON:0005068,5.21e-20,52;UBERON:0006241,5.21e-20,52;UBERON:0007135,5.21e-20,52;UBERON:0001017,1.96e-19,73;UBERON:0001016,7.85e-19,75;UBERON:0002020,2.51e-18,34;UBERON:0002346,1.03e-15,64;UBERON:0003075,1.03e-15,64;UBERON:0007284,1.03e-15,64;UBERON:0004121,3.46e-14,95;UBERON:0000924,3.46e-14,95;UBERON:0006601,3.46e-14,95;UBERON:0002038,1.65e-13,3;UBERON:0009663,1.65e-13,3;UBERON:0009661,1.65e-13,3;UBERON:0000125,1.65e-13,3;UBERON:0002308,1.65e-13,3;UBERON:0010371,2.06e-13,73;UBERON:0002257,5.12e-13,3;UBERON:0004684,6.17e-13,3;UBERON:0002275,6.17e-13,3;UBERON:0002950,2.98e-10,4;UBERON:0001891,2.98e-10,4;UBERON:0009616,2.98e-10,4;UBERON:0010286,2.98e-10,4;UBERON:0010314,5.02e-10,92;UBERON:0002256,1.25e-09,2;UBERON:0001896,2.02e-09,2;UBERON:0002298,2.02e-09,2;UBERON:0005290,2.02e-09,2;UBERON:0010096,2.02e-09,2;UBERON:0002616,6.05e-09,46;UBERON:0000489,8.50e-09,21;UBERON:0000955,1.03e-08,47;UBERON:0006238,1.03e-08,47;UBERON:0003528,5.70e-08,29;UBERON:0002791,5.70e-08,29;UBERON:0001893,5.70e-08,29;UBERON:0000025,1.66e-07,114;UBERON:0002780,4.11e-07,39;UBERON:0001890,4.11e-07,39;UBERON:0006240,4.11e-07,39;UBERON:0003080,6.68e-07,40;UBERON:0004111,8.18e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,4.57041575046086,4.19650227808066,0.489963196859816,0,0,2.20231761998777,2.93680877595932,2.4577045320999,0,0.365950574409639,0,11.1673199600552,5.06486349028512,1.68078072554491,5.59794312399969,3.55929201997757,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0.457500602818626,0,1.04294592115366,1.53429274398198,0.83115217823824,1.46017136760982,0,0,0,0,0.260240885925407,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.2562274405697,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.8679856575427,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.388076051348264,0,0,0.535106452806212,0.822745103010605,0.608929898229199,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,5.499301834998,0,1.5107877947794,0.675022500231806,0,1.81256963593682,0,0.726511433089237,0,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr14:68705447..68705460,- | |||
}} |
Revision as of 02:53, 13 September 2013
Short description: | p@chr14:68705447..68705460, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:68705447..68705460, - |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.54e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.54e-20 | 23 |
neuron | 1.32e-13 | 33 |
neuronal stem cell | 1.32e-13 | 33 |
neuroblast | 1.32e-13 | 33 |
electrically signaling cell | 1.32e-13 | 33 |
neuron of the substantia nigra | 1.65e-13 | 3 |
neuron of the ventral spinal cord | 5.12e-13 | 3 |
raphe nuclei neuron | 6.17e-13 | 3 |
electrically responsive cell | 3.17e-11 | 39 |
electrically active cell | 3.17e-11 | 39 |
neural cell | 5.25e-10 | 43 |
ectodermal cell | 9.77e-10 | 44 |
neurectodermal cell | 9.77e-10 | 44 |
neuron of the dorsal spinal cord | 1.25e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.