FFCP PHASE1:Mm9::chr14:70174964..70175000,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=458|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:70174964..70175000,+|id=chr14:70174964..70175000,+|ontology_enrichment_celltype=CL:0000838!5.31e-16!12;CL:0000791!8.01e-16!9;CL:0000789!8.01e-16!9;CL:0002420!8.01e-16!9;CL:0002419!8.01e-16!9;CL:0000790!8.01e-16!9;CL:0000542!1.05e-14!13;CL:0000051!1.05e-14!13;CL:0000988!4.72e-13!32;CL:0002032!4.72e-13!32;CL:0000037!4.72e-13!32;CL:0000566!4.72e-13!32;CL:0000837!4.72e-13!32;CL:0000084!7.53e-13!11;CL:0000827!7.53e-13!11;CL:0000624!1.95e-12!8;CL:0002031!1.18e-11!25;CL:0000738!4.82e-11!17;CL:0002087!4.82e-11!17;CL:0002320!3.53e-10!46;CL:0000134!3.53e-10!46;CL:0000219!7.00e-10!54;CL:0000034!1.22e-08!97;CL:0000144!2.50e-08!121;CL:0000012!2.50e-08!121;CL:0000063!1.07e-07!66|ontology_enrichment_celltype_v019_2=CL:0000838,8.30e-24,12;CL:0000542,4.84e-22,13;CL:0000051,4.84e-22,13;CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0000625,7.74e-19,1;CL:0000791,4.50e-18,9;CL:0000789,4.50e-18,9;CL:0002420,4.50e-18,9;CL:0002419,4.50e-18,9;CL:0000790,4.50e-18,9;CL:0000738,4.81e-17,17;CL:0002087,4.81e-17,17;CL:0000084,5.95e-15,11;CL:0000827,5.95e-15,11;CL:0002031,8.00e-12,25;CL:0000624,1.32e-09,8;CL:0000988,2.22e-09,32;CL:0002032,2.22e-09,32;CL:0000037,2.22e-09,32;CL:0000837,2.22e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.53e-10!46|ontology_enrichment_uberon_v019_2=UBERON:0001153,1.16e-18,1;UBERON:0001045,1.16e-18,1;UBERON:0001155,5.06e-10,2;UBERON:0000059,5.06e-10,2|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.140788722151667,0,0,0,1.02720437958723,0.437102012094987,0,0,0,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,3.18786951509699,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.69975726161829,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:70174964..70175000,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=458 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:70174964..70175000,+ | |||
|id=chr14:70174964..70175000,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.31e-16!12;CL:0000791!8.01e-16!9;CL:0000789!8.01e-16!9;CL:0002420!8.01e-16!9;CL:0002419!8.01e-16!9;CL:0000790!8.01e-16!9;CL:0000542!1.05e-14!13;CL:0000051!1.05e-14!13;CL:0000988!4.72e-13!32;CL:0002032!4.72e-13!32;CL:0000037!4.72e-13!32;CL:0000566!4.72e-13!32;CL:0000837!4.72e-13!32;CL:0000084!7.53e-13!11;CL:0000827!7.53e-13!11;CL:0000624!1.95e-12!8;CL:0002031!1.18e-11!25;CL:0000738!4.82e-11!17;CL:0002087!4.82e-11!17;CL:0002320!3.53e-10!46;CL:0000134!3.53e-10!46;CL:0000219!7.00e-10!54;CL:0000034!1.22e-08!97;CL:0000144!2.50e-08!121;CL:0000012!2.50e-08!121;CL:0000063!1.07e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.30e-24,12;CL:0000542,4.84e-22,13;CL:0000051,4.84e-22,13;CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0000625,7.74e-19,1;CL:0000791,4.50e-18,9;CL:0000789,4.50e-18,9;CL:0002420,4.50e-18,9;CL:0002419,4.50e-18,9;CL:0000790,4.50e-18,9;CL:0000738,4.81e-17,17;CL:0002087,4.81e-17,17;CL:0000084,5.95e-15,11;CL:0000827,5.95e-15,11;CL:0002031,8.00e-12,25;CL:0000624,1.32e-09,8;CL:0000988,2.22e-09,32;CL:0002032,2.22e-09,32;CL:0000037,2.22e-09,32;CL:0000837,2.22e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.53e-10!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001153,1.16e-18,1;UBERON:0001045,1.16e-18,1;UBERON:0001155,5.06e-10,2;UBERON:0000059,5.06e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,0.140788722151667,0,0,0,1.02720437958723,0.437102012094987,0,0,0,0.315462165358238,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,3.18786951509699,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.69975726161829,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:70174964..70175000,+ | |||
}} |
Revision as of 02:57, 13 September 2013
Short description: | p@chr14:70174964..70175000, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:70174964..70175000, + |
Coexpression cluster: | MCL_coexpression_mm9:458 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.30e-24 | 12 |
lymphocyte | 4.84e-22 | 13 |
common lymphoid progenitor | 4.84e-22 | 13 |
lymphocyte of B lineage | 5.15e-19 | 1 |
B cell | 5.15e-19 | 1 |
pro-B cell | 5.15e-19 | 1 |
CD8-positive, alpha-beta T cell | 7.74e-19 | 1 |
mature alpha-beta T cell | 4.50e-18 | 9 |
alpha-beta T cell | 4.50e-18 | 9 |
immature T cell | 4.50e-18 | 9 |
mature T cell | 4.50e-18 | 9 |
immature alpha-beta T cell | 4.50e-18 | 9 |
leukocyte | 4.81e-17 | 17 |
nongranular leukocyte | 4.81e-17 | 17 |
T cell | 5.95e-15 | 11 |
pro-T cell | 5.95e-15 | 11 |
hematopoietic lineage restricted progenitor cell | 8.00e-12 | 25 |
CD4-positive, alpha-beta T cell | 1.32e-09 | 8 |
hematopoietic cell | 2.22e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.22e-09 | 32 |
hematopoietic stem cell | 2.22e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.22e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
caecum | 1.16e-18 | 1 |
midgut | 1.16e-18 | 1 |
colon | 5.06e-10 | 2 |
large intestine | 5.06e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.