FFCP PHASE1:Hg19::chr4:163084826..163084834,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56884|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21386|TSSclassifier=W|UniProt=F8VZ90|association_with_transcript=283bp_to_ENST00000379164_5end|coexpression_cluster_id=C4134|description=CAGE_peak_4_at_FSTL5_5end|id=chr4:163084826..163084834,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;1.08e-10;1|ontology_enrichment_celltype_v019_2=CL:0002553,9.84e-11,1|ontology_enrichment_development_v019=UBERON:0006215;5.08e-29;3!UBERON:0006222;2.18e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;3.23e-10;4|ontology_enrichment_disease_v019_2=DOID:5409,3.30e-10,4|ontology_enrichment_uberon=UBERON:0001049!8.92e-55!57;UBERON:0005068!8.92e-55!57;UBERON:0006241!8.92e-55!57;UBERON:0007135!8.92e-55!57;UBERON:0001017!7.11e-50!82;UBERON:0005743!2.26e-49!86;UBERON:0000073!1.60e-45!94;UBERON:0001016!1.60e-45!94;UBERON:0002616!2.80e-44!59;UBERON:0002346!2.79e-43!90;UBERON:0000955!5.16e-43!69;UBERON:0006238!5.16e-43!69;UBERON:0003075!3.74e-41!86;UBERON:0007284!3.74e-41!86;UBERON:0002780!6.42e-39!41;UBERON:0001890!6.42e-39!41;UBERON:0006240!6.42e-39!41;UBERON:0002020!2.74e-38!34;UBERON:0003528!2.74e-38!34;UBERON:0003080!8.21e-38!42;UBERON:0001893!1.05e-37!34;UBERON:0002791!6.92e-36!33;UBERON:0001869!3.41e-34!32;UBERON:0002619!7.00e-32!22;UBERON:0003056!9.67e-28!61;UBERON:0000956!1.43e-27!25;UBERON:0000203!1.43e-27!25;UBERON:0001950!1.43e-27!20;UBERON:0007023!1.58e-27!115;UBERON:0000924!5.20e-25!173;UBERON:0006601!5.20e-25!173;UBERON:0004121!2.71e-23!169;UBERON:0000033!4.03e-22!123;UBERON:0000153!1.42e-20!129;UBERON:0007811!1.42e-20!129;UBERON:0003076!1.14e-17!15;UBERON:0003057!1.14e-17!15;UBERON:0000025!6.84e-17!194;UBERON:0000200!2.64e-13!6;UBERON:0004111!1.51e-12!241;UBERON:0004733!2.21e-12!12;UBERON:0002028!2.21e-12!12;UBERON:0007277!2.21e-12!12;UBERON:0002308!4.47e-12!9;UBERON:0000125!4.47e-12!9;UBERON:0004732!2.65e-11!13;UBERON:0000483!1.07e-10!309;UBERON:0000477!1.83e-10!286;UBERON:0000119!1.84e-10!312;UBERON:0002298!3.03e-10!8;UBERON:0002680!3.41e-10!9;UBERON:0001895!3.41e-10!9;UBERON:0010092!3.41e-10!9;UBERON:0001871!5.44e-10!7;UBERON:0000064!3.03e-09!219;UBERON:0002420!9.74e-09!9;UBERON:0007245!9.74e-09!9;UBERON:0010009!9.74e-09!9;UBERON:0010011!9.74e-09!9;UBERON:0000454!9.74e-09!9;UBERON:0000988!2.11e-08!3;UBERON:0000349!4.27e-08!5;UBERON:0006331!5.04e-08!3;UBERON:0009663!5.07e-08!7;UBERON:0002021!6.89e-08!5;UBERON:0002771!1.26e-07!3;UBERON:0002240!2.18e-07!3;UBERON:0001872!3.30e-07!5|ontology_enrichment_uberon_v019=UBERON:0002680;8.61e-17;9!UBERON:0001895;8.61e-17;9!UBERON:0002037;7.96e-15;6!UBERON:0004733;1.20e-12;12!UBERON:0002028;1.20e-12;12!UBERON:0004732;1.09e-11;13!UBERON:0001016;1.72e-09;83!UBERON:0000955;4.08e-09;68!UBERON:0001017;4.63e-09;75!UBERON:0000073;2.39e-08;53!UBERON:0002616;2.39e-08;53!UBERON:0002021;3.65e-08;5!UBERON:0002780;8.05e-07;41!UBERON:0001890;8.05e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002680,7.94e-17,9;UBERON:0001895,7.94e-17,9;UBERON:0010092,7.94e-17,9;UBERON:0000955,8.87e-17,68;UBERON:0006238,8.87e-17,68;UBERON:0001017,2.46e-16,81;UBERON:0000073,2.28e-15,53;UBERON:0002616,2.28e-15,53;UBERON:0002037,7.96e-15,6;UBERON:0006215,7.96e-15,6;UBERON:0001016,1.57e-14,89;UBERON:0001049,1.76e-14,56;UBERON:0005068,1.76e-14,56;UBERON:0006241,1.76e-14,56;UBERON:0007135,1.76e-14,56;UBERON:0002346,4.21e-13,86;UBERON:0004733,1.13e-12,12;UBERON:0002028,1.13e-12,12;UBERON:0007277,1.13e-12,12;UBERON:0004732,1.03e-11,13;UBERON:0003075,1.65e-11,82;UBERON:0007284,1.65e-11,82;UBERON:0003076,3.56e-10,15;UBERON:0003057,3.56e-10,15;UBERON:0010371,9.84e-09,104;UBERON:0002021,3.65e-08,5;UBERON:0004121,6.71e-08,171;UBERON:0000924,6.71e-08,171;UBERON:0006601,6.71e-08,171;UBERON:0011216,1.30e-07,223;UBERON:0002780,2.77e-07,41;UBERON:0001890,2.77e-07,41;UBERON:0003080,2.77e-07,41;UBERON:0006240,2.77e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56884 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21386 | |||
|TSSclassifier=W | |||
|UniProt=F8VZ90 | |||
|association_with_transcript=283bp_to_ENST00000379164_5end | |||
|coexpression_cluster_id=C4134 | |||
|description=CAGE_peak_4_at_FSTL5_5end | |||
|id=chr4:163084826..163084834,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.08e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,9.84e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.08e-29;3!UBERON:0006222;2.18e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;3.23e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.30e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.92e-55!57;UBERON:0005068!8.92e-55!57;UBERON:0006241!8.92e-55!57;UBERON:0007135!8.92e-55!57;UBERON:0001017!7.11e-50!82;UBERON:0005743!2.26e-49!86;UBERON:0000073!1.60e-45!94;UBERON:0001016!1.60e-45!94;UBERON:0002616!2.80e-44!59;UBERON:0002346!2.79e-43!90;UBERON:0000955!5.16e-43!69;UBERON:0006238!5.16e-43!69;UBERON:0003075!3.74e-41!86;UBERON:0007284!3.74e-41!86;UBERON:0002780!6.42e-39!41;UBERON:0001890!6.42e-39!41;UBERON:0006240!6.42e-39!41;UBERON:0002020!2.74e-38!34;UBERON:0003528!2.74e-38!34;UBERON:0003080!8.21e-38!42;UBERON:0001893!1.05e-37!34;UBERON:0002791!6.92e-36!33;UBERON:0001869!3.41e-34!32;UBERON:0002619!7.00e-32!22;UBERON:0003056!9.67e-28!61;UBERON:0000956!1.43e-27!25;UBERON:0000203!1.43e-27!25;UBERON:0001950!1.43e-27!20;UBERON:0007023!1.58e-27!115;UBERON:0000924!5.20e-25!173;UBERON:0006601!5.20e-25!173;UBERON:0004121!2.71e-23!169;UBERON:0000033!4.03e-22!123;UBERON:0000153!1.42e-20!129;UBERON:0007811!1.42e-20!129;UBERON:0003076!1.14e-17!15;UBERON:0003057!1.14e-17!15;UBERON:0000025!6.84e-17!194;UBERON:0000200!2.64e-13!6;UBERON:0004111!1.51e-12!241;UBERON:0004733!2.21e-12!12;UBERON:0002028!2.21e-12!12;UBERON:0007277!2.21e-12!12;UBERON:0002308!4.47e-12!9;UBERON:0000125!4.47e-12!9;UBERON:0004732!2.65e-11!13;UBERON:0000483!1.07e-10!309;UBERON:0000477!1.83e-10!286;UBERON:0000119!1.84e-10!312;UBERON:0002298!3.03e-10!8;UBERON:0002680!3.41e-10!9;UBERON:0001895!3.41e-10!9;UBERON:0010092!3.41e-10!9;UBERON:0001871!5.44e-10!7;UBERON:0000064!3.03e-09!219;UBERON:0002420!9.74e-09!9;UBERON:0007245!9.74e-09!9;UBERON:0010009!9.74e-09!9;UBERON:0010011!9.74e-09!9;UBERON:0000454!9.74e-09!9;UBERON:0000988!2.11e-08!3;UBERON:0000349!4.27e-08!5;UBERON:0006331!5.04e-08!3;UBERON:0009663!5.07e-08!7;UBERON:0002021!6.89e-08!5;UBERON:0002771!1.26e-07!3;UBERON:0002240!2.18e-07!3;UBERON:0001872!3.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;8.61e-17;9!UBERON:0001895;8.61e-17;9!UBERON:0002037;7.96e-15;6!UBERON:0004733;1.20e-12;12!UBERON:0002028;1.20e-12;12!UBERON:0004732;1.09e-11;13!UBERON:0001016;1.72e-09;83!UBERON:0000955;4.08e-09;68!UBERON:0001017;4.63e-09;75!UBERON:0000073;2.39e-08;53!UBERON:0002616;2.39e-08;53!UBERON:0002021;3.65e-08;5!UBERON:0002780;8.05e-07;41!UBERON:0001890;8.05e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,7.94e-17,9;UBERON:0001895,7.94e-17,9;UBERON:0010092,7.94e-17,9;UBERON:0000955,8.87e-17,68;UBERON:0006238,8.87e-17,68;UBERON:0001017,2.46e-16,81;UBERON:0000073,2.28e-15,53;UBERON:0002616,2.28e-15,53;UBERON:0002037,7.96e-15,6;UBERON:0006215,7.96e-15,6;UBERON:0001016,1.57e-14,89;UBERON:0001049,1.76e-14,56;UBERON:0005068,1.76e-14,56;UBERON:0006241,1.76e-14,56;UBERON:0007135,1.76e-14,56;UBERON:0002346,4.21e-13,86;UBERON:0004733,1.13e-12,12;UBERON:0002028,1.13e-12,12;UBERON:0007277,1.13e-12,12;UBERON:0004732,1.03e-11,13;UBERON:0003075,1.65e-11,82;UBERON:0007284,1.65e-11,82;UBERON:0003076,3.56e-10,15;UBERON:0003057,3.56e-10,15;UBERON:0010371,9.84e-09,104;UBERON:0002021,3.65e-08,5;UBERON:0004121,6.71e-08,171;UBERON:0000924,6.71e-08,171;UBERON:0006601,6.71e-08,171;UBERON:0011216,1.30e-07,223;UBERON:0002780,2.77e-07,41;UBERON:0001890,2.77e-07,41;UBERON:0003080,2.77e-07,41;UBERON:0006240,2.77e-07,41 | |||
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|short_description=p4@FSTL5 | |||
}} |
Revision as of 03:09, 13 September 2013
Short description: | p4@FSTL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FSTL5_5end |
Coexpression cluster: | C4134_nonsmall_cerebellum_medulloblastoma_small_gastrointestinal_eye_pons |
Association with transcript: | 283bp_to_ENST00000379164_5end |
EntrezGene: | FSTL5 |
HGNC: | 21386 |
UniProt: | F8VZ90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 9.84e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 7.94e-17 | 9 |
metencephalon | 7.94e-17 | 9 |
future metencephalon | 7.94e-17 | 9 |
brain | 8.87e-17 | 68 |
future brain | 8.87e-17 | 68 |
central nervous system | 2.46e-16 | 81 |
regional part of nervous system | 2.28e-15 | 53 |
regional part of brain | 2.28e-15 | 53 |
cerebellum | 7.96e-15 | 6 |
rhombic lip | 7.96e-15 | 6 |
nervous system | 1.57e-14 | 89 |
neural tube | 1.76e-14 | 56 |
neural rod | 1.76e-14 | 56 |
future spinal cord | 1.76e-14 | 56 |
neural keel | 1.76e-14 | 56 |
neurectoderm | 4.21e-13 | 86 |
segmental subdivision of hindbrain | 1.13e-12 | 12 |
hindbrain | 1.13e-12 | 12 |
presumptive hindbrain | 1.13e-12 | 12 |
segmental subdivision of nervous system | 1.03e-11 | 13 |
neural plate | 1.65e-11 | 82 |
presumptive neural plate | 1.65e-11 | 82 |
posterior neural tube | 3.56e-10 | 15 |
chordal neural plate | 3.56e-10 | 15 |
ecto-epithelium | 9.84e-09 | 104 |
occipital lobe | 3.65e-08 | 5 |
ectoderm-derived structure | 6.71e-08 | 171 |
ectoderm | 6.71e-08 | 171 |
presumptive ectoderm | 6.71e-08 | 171 |
organ system subdivision | 1.30e-07 | 223 |
regional part of forebrain | 2.77e-07 | 41 |
forebrain | 2.77e-07 | 41 |
anterior neural tube | 2.77e-07 | 41 |
future forebrain | 2.77e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.30e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.