FFCP PHASE1:Mm9::chr15:72992657..72992663,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=48|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:72992657..72992663,-|id=chr15:72992657..72992663,-|ontology_enrichment_celltype=CL:0000838!1.20e-12!12;CL:0000791!8.13e-12!9;CL:0000789!8.13e-12!9;CL:0002420!8.13e-12!9;CL:0002419!8.13e-12!9;CL:0000790!8.13e-12!9;CL:0000542!1.23e-11!13;CL:0000051!1.23e-11!13;CL:0002031!5.33e-10!25;CL:0000084!1.24e-09!11;CL:0000827!1.24e-09!11;CL:0000988!1.56e-09!32;CL:0002032!1.56e-09!32;CL:0000037!1.56e-09!32;CL:0000566!1.56e-09!32;CL:0000837!1.56e-09!32;CL:0000624!6.93e-09!8;CL:0000738!8.89e-09!17;CL:0002087!8.89e-09!17|ontology_enrichment_celltype_v019_2=CL:0000945,3.44e-16,1;CL:0000236,3.44e-16,1;CL:0000826,3.44e-16,1;CL:0000815,9.51e-16,1;CL:0000792,9.51e-16,1;CL:0000838,1.22e-11,12;CL:0000542,8.38e-11,13;CL:0000051,8.38e-11,13;CL:0000738,1.98e-08,17;CL:0002087,1.98e-08,17;CL:0000624,3.71e-08,8;CL:0000791,2.36e-07,9;CL:0000789,2.36e-07,9;CL:0002420,2.36e-07,9;CL:0002419,2.36e-07,9;CL:0000790,2.36e-07,9|ontology_enrichment_disease=DOID:0060100!8.85e-07!3;DOID:4045!8.85e-07!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!5.80e-17!9;UBERON:0000019!5.80e-17!9;UBERON:0000047!5.80e-17!9;UBERON:0004088!5.80e-17!9;UBERON:0002104!5.80e-17!9;UBERON:0001456!5.80e-17!9;UBERON:0003072!5.80e-17!9;UBERON:0003071!5.80e-17!9;UBERON:0004128!5.80e-17!9;UBERON:0001444!8.54e-14!11;UBERON:0000020!1.32e-12!12;UBERON:0001032!1.32e-12!12;UBERON:0004456!1.32e-12!12;UBERON:0005085!1.34e-11!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.03e-07,9;UBERON:0000019,2.03e-07,9;UBERON:0000047,2.03e-07,9;UBERON:0010312,2.03e-07,9;UBERON:0004088,2.03e-07,9;UBERON:0002104,2.03e-07,9;UBERON:0001456,2.03e-07,9;UBERON:0003072,2.03e-07,9;UBERON:0004128,2.03e-07,9;UBERON:0003071,2.03e-07,9|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.140788722151667,0,0,0,0,1.31130603628496,0,0,0,0.473193248037357,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,2.35292595212406,0,0,0,0,0,0,0,0,0,0,0,11.0736519998106,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360124259610698,1.35634336052144,2.10913147369116,0.512454881139399,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr15:72992657..72992663,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:72992657..72992663,- | |||
|id=chr15:72992657..72992663,- | |||
|ontology_enrichment_celltype=CL:0000838!1.20e-12!12;CL:0000791!8.13e-12!9;CL:0000789!8.13e-12!9;CL:0002420!8.13e-12!9;CL:0002419!8.13e-12!9;CL:0000790!8.13e-12!9;CL:0000542!1.23e-11!13;CL:0000051!1.23e-11!13;CL:0002031!5.33e-10!25;CL:0000084!1.24e-09!11;CL:0000827!1.24e-09!11;CL:0000988!1.56e-09!32;CL:0002032!1.56e-09!32;CL:0000037!1.56e-09!32;CL:0000566!1.56e-09!32;CL:0000837!1.56e-09!32;CL:0000624!6.93e-09!8;CL:0000738!8.89e-09!17;CL:0002087!8.89e-09!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.44e-16,1;CL:0000236,3.44e-16,1;CL:0000826,3.44e-16,1;CL:0000815,9.51e-16,1;CL:0000792,9.51e-16,1;CL:0000838,1.22e-11,12;CL:0000542,8.38e-11,13;CL:0000051,8.38e-11,13;CL:0000738,1.98e-08,17;CL:0002087,1.98e-08,17;CL:0000624,3.71e-08,8;CL:0000791,2.36e-07,9;CL:0000789,2.36e-07,9;CL:0002420,2.36e-07,9;CL:0002419,2.36e-07,9;CL:0000790,2.36e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!8.85e-07!3;DOID:4045!8.85e-07!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.80e-17!9;UBERON:0000019!5.80e-17!9;UBERON:0000047!5.80e-17!9;UBERON:0004088!5.80e-17!9;UBERON:0002104!5.80e-17!9;UBERON:0001456!5.80e-17!9;UBERON:0003072!5.80e-17!9;UBERON:0003071!5.80e-17!9;UBERON:0004128!5.80e-17!9;UBERON:0001444!8.54e-14!11;UBERON:0000020!1.32e-12!12;UBERON:0001032!1.32e-12!12;UBERON:0004456!1.32e-12!12;UBERON:0005085!1.34e-11!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.03e-07,9;UBERON:0000019,2.03e-07,9;UBERON:0000047,2.03e-07,9;UBERON:0010312,2.03e-07,9;UBERON:0004088,2.03e-07,9;UBERON:0002104,2.03e-07,9;UBERON:0001456,2.03e-07,9;UBERON:0003072,2.03e-07,9;UBERON:0004128,2.03e-07,9;UBERON:0003071,2.03e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.140788722151667,0,0,0,0,1.31130603628496,0,0,0,0.473193248037357,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,2.35292595212406,0,0,0,0,0,0,0,0,0,0,0,11.0736519998106,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360124259610698,1.35634336052144,2.10913147369116,0.512454881139399,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr15:72992657..72992663,- | |||
}} |
Revision as of 10:48, 13 September 2013
Short description: | p@chr15:72992657..72992663, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:72992657..72992663, - |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.44e-16 | 1 |
B cell | 3.44e-16 | 1 |
pro-B cell | 3.44e-16 | 1 |
regulatory T cell | 9.51e-16 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.51e-16 | 1 |
lymphoid lineage restricted progenitor cell | 1.22e-11 | 12 |
lymphocyte | 8.38e-11 | 13 |
common lymphoid progenitor | 8.38e-11 | 13 |
leukocyte | 1.98e-08 | 17 |
nongranular leukocyte | 1.98e-08 | 17 |
CD4-positive, alpha-beta T cell | 3.71e-08 | 8 |
mature alpha-beta T cell | 2.36e-07 | 9 |
alpha-beta T cell | 2.36e-07 | 9 |
immature T cell | 2.36e-07 | 9 |
mature T cell | 2.36e-07 | 9 |
immature alpha-beta T cell | 2.36e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
eye | 2.03e-07 | 9 |
camera-type eye | 2.03e-07 | 9 |
simple eye | 2.03e-07 | 9 |
immature eye | 2.03e-07 | 9 |
ocular region | 2.03e-07 | 9 |
visual system | 2.03e-07 | 9 |
face | 2.03e-07 | 9 |
optic cup | 2.03e-07 | 9 |
optic vesicle | 2.03e-07 | 9 |
eye primordium | 2.03e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.