FFCP PHASE1:Mm9::chr15:79731617..79731628,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:79731617..79731628,+|id=chr15:79731617..79731628,+|ontology_enrichment_celltype=CL:0000553!1.38e-07!6;CL:0000556!1.38e-07!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.71e-29,6;CL:0000556,1.71e-29,6;CL:0000050,7.35e-20,9;CL:0000839,6.60e-14,13;CL:0000763,2.20e-11,16;CL:0000049,1.19e-09,19;CL:0002031,2.02e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.96e-08!48;UBERON:0002390!8.79e-08!45;UBERON:0003061!8.79e-08!45;UBERON:0000065!9.05e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-12,1;UBERON:0001097,1.20e-12,1;UBERON:0003968,1.20e-12,1;UBERON:0001467,1.20e-12,1;UBERON:0002371,2.20e-11,16;UBERON:0002193,3.33e-11,48;UBERON:0002405,3.33e-11,48;UBERON:0002390,8.21e-09,45;UBERON:0003061,8.21e-09,45;UBERON:0001474,2.19e-08,22;UBERON:0004765,2.19e-08,22;UBERON:0001434,2.19e-08,22;UBERON:0002106,3.41e-08,6;UBERON:0004457,3.41e-08,6;UBERON:0000042,3.41e-08,6;UBERON:0004854,3.41e-08,6;UBERON:0009034,3.41e-08,6;UBERON:0002095,3.41e-08,6;UBERON:0004782,3.41e-08,6;UBERON:0003281,3.41e-08,6;UBERON:0009664,3.41e-08,6;UBERON:0002296,3.41e-08,6;UBERON:0005602,3.41e-08,6;UBERON:0001179,3.41e-08,6;UBERON:0006293,3.41e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,1.01237633694913,0,3.3123527362615,3.42786084014347,2.54633791078818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,12.4290184150642,0,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56306321196779,0,0,0,1.0935538217682,0.915112692826091,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526139422875686,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr15:79731617..79731628,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:79731617..79731628,+ | |||
|id=chr15:79731617..79731628,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.38e-07!6;CL:0000556!1.38e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.71e-29,6;CL:0000556,1.71e-29,6;CL:0000050,7.35e-20,9;CL:0000839,6.60e-14,13;CL:0000763,2.20e-11,16;CL:0000049,1.19e-09,19;CL:0002031,2.02e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.96e-08!48;UBERON:0002390!8.79e-08!45;UBERON:0003061!8.79e-08!45;UBERON:0000065!9.05e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-12,1;UBERON:0001097,1.20e-12,1;UBERON:0003968,1.20e-12,1;UBERON:0001467,1.20e-12,1;UBERON:0002371,2.20e-11,16;UBERON:0002193,3.33e-11,48;UBERON:0002405,3.33e-11,48;UBERON:0002390,8.21e-09,45;UBERON:0003061,8.21e-09,45;UBERON:0001474,2.19e-08,22;UBERON:0004765,2.19e-08,22;UBERON:0001434,2.19e-08,22;UBERON:0002106,3.41e-08,6;UBERON:0004457,3.41e-08,6;UBERON:0000042,3.41e-08,6;UBERON:0004854,3.41e-08,6;UBERON:0009034,3.41e-08,6;UBERON:0002095,3.41e-08,6;UBERON:0004782,3.41e-08,6;UBERON:0003281,3.41e-08,6;UBERON:0009664,3.41e-08,6;UBERON:0002296,3.41e-08,6;UBERON:0005602,3.41e-08,6;UBERON:0001179,3.41e-08,6;UBERON:0006293,3.41e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,1.01237633694913,0,3.3123527362615,3.42786084014347,2.54633791078818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,12.4290184150642,0,0,0,0,0,0,0,0,0.578397427679647,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56306321196779,0,0,0,1.0935538217682,0.915112692826091,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526139422875686,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:79731617..79731628,+ | |||
}} |
Revision as of 11:13, 13 September 2013
Short description: | p@chr15:79731617..79731628, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:79731617..79731628, + |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.71e-29 | 6 |
megakaryocyte | 1.71e-29 | 6 |
megakaryocyte-erythroid progenitor cell | 7.35e-20 | 9 |
myeloid lineage restricted progenitor cell | 6.60e-14 | 13 |
myeloid cell | 2.20e-11 | 16 |
common myeloid progenitor | 1.19e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 2.02e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.20e-12 | 1 |
axillary lymph node | 1.20e-12 | 1 |
peripheral lymph node | 1.20e-12 | 1 |
shoulder | 1.20e-12 | 1 |
bone marrow | 2.20e-11 | 16 |
hemolymphoid system | 3.33e-11 | 48 |
immune system | 3.33e-11 | 48 |
hematopoietic system | 8.21e-09 | 45 |
blood island | 8.21e-09 | 45 |
bone element | 2.19e-08 | 22 |
skeletal element | 2.19e-08 | 22 |
skeletal system | 2.19e-08 | 22 |
spleen | 3.41e-08 | 6 |
cavity lining | 3.41e-08 | 6 |
serous membrane | 3.41e-08 | 6 |
gastrointestinal system mesentery | 3.41e-08 | 6 |
stomach region | 3.41e-08 | 6 |
mesentery | 3.41e-08 | 6 |
gastrointestinal system serosa | 3.41e-08 | 6 |
mesentery of stomach | 3.41e-08 | 6 |
gut mesentery | 3.41e-08 | 6 |
dorsal mesentery | 3.41e-08 | 6 |
dorsal mesogastrium | 3.41e-08 | 6 |
peritoneal cavity | 3.41e-08 | 6 |
spleen primordium | 3.41e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.