FFCP PHASE1:Hg19::chr4:6324582..6324604,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5522|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=9306|TSSclassifier=S|UniProt=|association_with_transcript=-111bp_to_BC045682_5end|coexpression_cluster_id=C42|description=CAGE_peak_21_at_PPP2R2C_5end|id=chr4:6324582..6324604,-|ontology_enrichment_celltype=CL:0000181!4.59e-07!12;CL:0000417!4.59e-07!12;CL:0000668!4.59e-07!12;CL:0000414!4.59e-07!12;CL:0000412!4.59e-07!12;CL:0000182!4.59e-07!12|ontology_enrichment_celltype_v019=CL:0000182;1.25e-37;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-37,12;CL:0000223,1.46e-08,58|ontology_enrichment_development_v019=UBERON:0004161;6.13e-41;11!UBERON:0009497;7.97e-35;13!UBERON:0001041;4.23e-27;30!UBERON:0003104;6.78e-15;31|ontology_enrichment_disease=DOID:0050619!1.25e-09!1;DOID:1357!1.25e-09!1|ontology_enrichment_disease_v019=DOID:5409;8.81e-14;4!DOID:7;8.45e-13;39!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:7,2.67e-12,39;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:305,2.62e-08,106;DOID:3905,7.48e-07,9|ontology_enrichment_uberon=UBERON:0001873!3.76e-18!2;UBERON:0010122!3.76e-18!2;UBERON:0001871!1.30e-16!7;UBERON:0005383!2.03e-12!3;UBERON:0005382!2.03e-12!3;UBERON:0002771!5.28e-12!3;UBERON:0001869!1.62e-11!32;UBERON:0002791!3.71e-11!33;UBERON:0002020!8.12e-11!34;UBERON:0003528!8.12e-11!34;UBERON:0001893!8.12e-11!34;UBERON:0003112!1.15e-09!1;UBERON:0000032!1.15e-09!1;UBERON:0005253!1.15e-09!1;UBERON:0003128!1.15e-09!1;UBERON:0002241!1.15e-09!1;UBERON:0001703!1.15e-09!1;UBERON:0004761!1.15e-09!1;UBERON:0009617!1.15e-09!1;UBERON:0001764!1.25e-09!1;UBERON:0001825!1.25e-09!1;UBERON:0001950!1.41e-09!20;UBERON:0000369!1.55e-09!4;UBERON:0002435!1.55e-09!4;UBERON:0000204!1.55e-09!4;UBERON:0010082!1.55e-09!4;UBERON:0002420!4.95e-09!9;UBERON:0007245!4.95e-09!9;UBERON:0010009!4.95e-09!9;UBERON:0010011!4.95e-09!9;UBERON:0000454!4.95e-09!9;UBERON:0002780!6.89e-09!41;UBERON:0001890!6.89e-09!41;UBERON:0006240!6.89e-09!41;UBERON:0002619!9.92e-09!22;UBERON:0003080!1.16e-08!42;UBERON:0007023!2.76e-08!115;UBERON:0000955!4.07e-08!69;UBERON:0006238!4.07e-08!69;UBERON:0001049!4.65e-08!57;UBERON:0005068!4.65e-08!57;UBERON:0006241!4.65e-08!57;UBERON:0007135!4.65e-08!57;UBERON:0002616!9.34e-08!59;UBERON:0000956!1.05e-07!25;UBERON:0000203!1.05e-07!25;UBERON:0000033!1.75e-07!123;UBERON:0000153!4.75e-07!129;UBERON:0007811!4.75e-07!129|ontology_enrichment_uberon_v019=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;4.34e-14;31!UBERON:0002330;4.34e-14;31!UBERON:0002368;2.77e-13;33!UBERON:0000949;2.21e-10;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.46e-24,19;UBERON:0006925,3.46e-24,19;UBERON:0008836,3.46e-24,19;UBERON:0008835,4.90e-21,22;UBERON:0003894,4.90e-21,22;UBERON:0009854,3.62e-20,23;UBERON:0007499,1.23e-18,25;UBERON:0009497,1.23e-18,25;UBERON:0000015,1.23e-18,25;UBERON:0002423,1.23e-18,25;UBERON:0006235,1.23e-18,25;UBERON:0004161,1.23e-18,25;UBERON:0009856,5.83e-18,26;UBERON:0002365,3.16e-15,31;UBERON:0002330,3.16e-15,31;UBERON:0002368,1.35e-13,35;UBERON:0000949,8.78e-11,45;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0003929,3.93e-09,54;UBERON:0005172,3.93e-09,54;UBERON:0005173,3.93e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.98e-08,59;UBERON:0002417,2.64e-08,60;UBERON:0000916,2.64e-08,60;UBERON:0009569,6.64e-08,112;UBERON:0004921,1.75e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36349546921671,2.14281231791033,2.89835238572995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=9306 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-111bp_to_BC045682_5end | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_21_at_PPP2R2C_5end | |||
|id=chr4:6324582..6324604,- | |||
|ontology_enrichment_celltype=CL:0000181!4.59e-07!12;CL:0000417!4.59e-07!12;CL:0000668!4.59e-07!12;CL:0000414!4.59e-07!12;CL:0000412!4.59e-07!12;CL:0000182!4.59e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.25e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-37,12;CL:0000223,1.46e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.13e-41;11!UBERON:0009497;7.97e-35;13!UBERON:0001041;4.23e-27;30!UBERON:0003104;6.78e-15;31 | |||
|ontology_enrichment_disease=DOID:0050619!1.25e-09!1;DOID:1357!1.25e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.81e-14;4!DOID:7;8.45e-13;39!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:7,2.67e-12,39;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:305,2.62e-08,106;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001873!3.76e-18!2;UBERON:0010122!3.76e-18!2;UBERON:0001871!1.30e-16!7;UBERON:0005383!2.03e-12!3;UBERON:0005382!2.03e-12!3;UBERON:0002771!5.28e-12!3;UBERON:0001869!1.62e-11!32;UBERON:0002791!3.71e-11!33;UBERON:0002020!8.12e-11!34;UBERON:0003528!8.12e-11!34;UBERON:0001893!8.12e-11!34;UBERON:0003112!1.15e-09!1;UBERON:0000032!1.15e-09!1;UBERON:0005253!1.15e-09!1;UBERON:0003128!1.15e-09!1;UBERON:0002241!1.15e-09!1;UBERON:0001703!1.15e-09!1;UBERON:0004761!1.15e-09!1;UBERON:0009617!1.15e-09!1;UBERON:0001764!1.25e-09!1;UBERON:0001825!1.25e-09!1;UBERON:0001950!1.41e-09!20;UBERON:0000369!1.55e-09!4;UBERON:0002435!1.55e-09!4;UBERON:0000204!1.55e-09!4;UBERON:0010082!1.55e-09!4;UBERON:0002420!4.95e-09!9;UBERON:0007245!4.95e-09!9;UBERON:0010009!4.95e-09!9;UBERON:0010011!4.95e-09!9;UBERON:0000454!4.95e-09!9;UBERON:0002780!6.89e-09!41;UBERON:0001890!6.89e-09!41;UBERON:0006240!6.89e-09!41;UBERON:0002619!9.92e-09!22;UBERON:0003080!1.16e-08!42;UBERON:0007023!2.76e-08!115;UBERON:0000955!4.07e-08!69;UBERON:0006238!4.07e-08!69;UBERON:0001049!4.65e-08!57;UBERON:0005068!4.65e-08!57;UBERON:0006241!4.65e-08!57;UBERON:0007135!4.65e-08!57;UBERON:0002616!9.34e-08!59;UBERON:0000956!1.05e-07!25;UBERON:0000203!1.05e-07!25;UBERON:0000033!1.75e-07!123;UBERON:0000153!4.75e-07!129;UBERON:0007811!4.75e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;4.34e-14;31!UBERON:0002330;4.34e-14;31!UBERON:0002368;2.77e-13;33!UBERON:0000949;2.21e-10;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.46e-24,19;UBERON:0006925,3.46e-24,19;UBERON:0008836,3.46e-24,19;UBERON:0008835,4.90e-21,22;UBERON:0003894,4.90e-21,22;UBERON:0009854,3.62e-20,23;UBERON:0007499,1.23e-18,25;UBERON:0009497,1.23e-18,25;UBERON:0000015,1.23e-18,25;UBERON:0002423,1.23e-18,25;UBERON:0006235,1.23e-18,25;UBERON:0004161,1.23e-18,25;UBERON:0009856,5.83e-18,26;UBERON:0002365,3.16e-15,31;UBERON:0002330,3.16e-15,31;UBERON:0002368,1.35e-13,35;UBERON:0000949,8.78e-11,45;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0003929,3.93e-09,54;UBERON:0005172,3.93e-09,54;UBERON:0005173,3.93e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.98e-08,59;UBERON:0002417,2.64e-08,60;UBERON:0000916,2.64e-08,60;UBERON:0009569,6.64e-08,112;UBERON:0004921,1.75e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36349546921671,2.14281231791033,2.89835238572995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,10.7298777937012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p21@PPP2R2C | |||
}} |
Revision as of 11:16, 13 September 2013
Short description: | p21@PPP2R2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_PPP2R2C_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -111bp_to_BC045682_5end |
EntrezGene: | PPP2R2C |
HGNC: | 9306 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-37 | 12 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.46e-24 | 19 |
digestive gland | 3.46e-24 | 19 |
liver bud | 3.46e-24 | 19 |
hepatic diverticulum | 4.90e-21 | 22 |
liver primordium | 4.90e-21 | 22 |
digestive tract diverticulum | 3.62e-20 | 23 |
epithelial sac | 1.23e-18 | 25 |
epithelium of foregut-midgut junction | 1.23e-18 | 25 |
anatomical boundary | 1.23e-18 | 25 |
hepatobiliary system | 1.23e-18 | 25 |
foregut-midgut junction | 1.23e-18 | 25 |
septum transversum | 1.23e-18 | 25 |
sac | 5.83e-18 | 26 |
exocrine gland | 3.16e-15 | 31 |
exocrine system | 3.16e-15 | 31 |
endocrine gland | 1.35e-13 | 35 |
endocrine system | 8.78e-11 | 45 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
gut epithelium | 3.93e-09 | 54 |
abdomen element | 3.93e-09 | 54 |
abdominal segment element | 3.93e-09 | 54 |
trunk region element | 1.11e-08 | 101 |
gland | 1.98e-08 | 59 |
abdominal segment of trunk | 2.64e-08 | 60 |
abdomen | 2.64e-08 | 60 |
subdivision of trunk | 6.64e-08 | 112 |
subdivision of digestive tract | 1.75e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
disease of anatomical entity | 2.67e-12 | 39 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 7.48e-07 | 9 |
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