FFCP PHASE1:Mm9::chr15:81997354..81997363,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=458|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:81997354..81997363,-|id=chr15:81997354..81997363,-|ontology_enrichment_celltype=CL:0000791!7.65e-16!9;CL:0000789!7.65e-16!9;CL:0002420!7.65e-16!9;CL:0002419!7.65e-16!9;CL:0000790!7.65e-16!9;CL:0000838!2.28e-15!12;CL:0000542!4.38e-14!13;CL:0000051!4.38e-14!13;CL:0000624!4.19e-13!8;CL:0002031!6.02e-13!25;CL:0000084!8.78e-13!11;CL:0000827!8.78e-13!11;CL:0000738!1.85e-10!17;CL:0002087!1.85e-10!17;CL:0000988!1.25e-09!32;CL:0002032!1.25e-09!32;CL:0000037!1.25e-09!32;CL:0000566!1.25e-09!32;CL:0000837!1.25e-09!32;CL:0000893!5.24e-08!6;CL:0002489!5.24e-08!6;CL:0000898!5.24e-08!6;CL:0000809!5.24e-08!6;CL:0000810!5.24e-08!6;CL:0000895!5.24e-08!6;CL:0000808!5.24e-08!6;CL:0000894!5.24e-08!6;CL:0000806!5.24e-08!6;CL:0000807!5.24e-08!6;CL:0000805!5.24e-08!6;CL:0002425!5.24e-08!6;CL:0002436!5.24e-08!6;CL:0002427!5.24e-08!6;CL:0002428!5.24e-08!6;CL:0002429!5.24e-08!6;CL:0002433!5.24e-08!6;CL:0002431!5.24e-08!6;CL:0002432!5.24e-08!6|ontology_enrichment_celltype_v019_2=CL:0000945,3.06e-23,1;CL:0000236,3.06e-23,1;CL:0000826,3.06e-23,1;CL:0000625,1.39e-22,1;CL:0000838,3.40e-17,12;CL:0000542,5.98e-16,13;CL:0000051,5.98e-16,13;CL:0002031,9.61e-15,25;CL:0000738,2.01e-12,17;CL:0002087,2.01e-12,17;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0000791,1.13e-10,9;CL:0000789,1.13e-10,9;CL:0002420,1.13e-10,9;CL:0002419,1.13e-10,9;CL:0000790,1.13e-10,9;CL:0000084,6.35e-09,11;CL:0000827,6.35e-09,11;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.78e-20!48;UBERON:0004177!4.43e-19!29;UBERON:0002390!3.81e-17!45;UBERON:0003061!3.81e-17!45;UBERON:0002370!2.31e-15!23;UBERON:0000974!2.31e-15!23;UBERON:0004807!2.31e-15!23;UBERON:0005058!2.31e-15!23;UBERON:0003351!2.31e-15!23;UBERON:0009113!2.31e-15!23;UBERON:0003295!2.31e-15!23;UBERON:0009722!2.31e-15!23;UBERON:0005562!2.31e-15!23;UBERON:0007690!2.31e-15!23;UBERON:0006562!1.26e-14!24;UBERON:0003408!1.26e-14!24;UBERON:0001557!1.26e-14!24;UBERON:0001042!1.26e-14!24;UBERON:0008814!1.26e-14!24;UBERON:0009145!1.26e-14!24;UBERON:0000072!9.69e-13!27;UBERON:0002405!1.76e-12!70;UBERON:0000065!1.45e-10!41;UBERON:0001004!3.01e-10!42;UBERON:0003081!3.53e-10!88;UBERON:0005057!1.65e-09!51;UBERON:0000063!2.68e-09!35|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-08,46|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0.159544317990673,0.684802919724823,0.262261207256992,0,0,0,0.473193248037357,0.274228867211478,1.27316895539409,0,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,4.53013036355888,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0.194915761479505,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:81997354..81997363,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=458 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:81997354..81997363,- | |||
|id=chr15:81997354..81997363,- | |||
|ontology_enrichment_celltype=CL:0000791!7.65e-16!9;CL:0000789!7.65e-16!9;CL:0002420!7.65e-16!9;CL:0002419!7.65e-16!9;CL:0000790!7.65e-16!9;CL:0000838!2.28e-15!12;CL:0000542!4.38e-14!13;CL:0000051!4.38e-14!13;CL:0000624!4.19e-13!8;CL:0002031!6.02e-13!25;CL:0000084!8.78e-13!11;CL:0000827!8.78e-13!11;CL:0000738!1.85e-10!17;CL:0002087!1.85e-10!17;CL:0000988!1.25e-09!32;CL:0002032!1.25e-09!32;CL:0000037!1.25e-09!32;CL:0000566!1.25e-09!32;CL:0000837!1.25e-09!32;CL:0000893!5.24e-08!6;CL:0002489!5.24e-08!6;CL:0000898!5.24e-08!6;CL:0000809!5.24e-08!6;CL:0000810!5.24e-08!6;CL:0000895!5.24e-08!6;CL:0000808!5.24e-08!6;CL:0000894!5.24e-08!6;CL:0000806!5.24e-08!6;CL:0000807!5.24e-08!6;CL:0000805!5.24e-08!6;CL:0002425!5.24e-08!6;CL:0002436!5.24e-08!6;CL:0002427!5.24e-08!6;CL:0002428!5.24e-08!6;CL:0002429!5.24e-08!6;CL:0002433!5.24e-08!6;CL:0002431!5.24e-08!6;CL:0002432!5.24e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.06e-23,1;CL:0000236,3.06e-23,1;CL:0000826,3.06e-23,1;CL:0000625,1.39e-22,1;CL:0000838,3.40e-17,12;CL:0000542,5.98e-16,13;CL:0000051,5.98e-16,13;CL:0002031,9.61e-15,25;CL:0000738,2.01e-12,17;CL:0002087,2.01e-12,17;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0000791,1.13e-10,9;CL:0000789,1.13e-10,9;CL:0002420,1.13e-10,9;CL:0002419,1.13e-10,9;CL:0000790,1.13e-10,9;CL:0000084,6.35e-09,11;CL:0000827,6.35e-09,11;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.78e-20!48;UBERON:0004177!4.43e-19!29;UBERON:0002390!3.81e-17!45;UBERON:0003061!3.81e-17!45;UBERON:0002370!2.31e-15!23;UBERON:0000974!2.31e-15!23;UBERON:0004807!2.31e-15!23;UBERON:0005058!2.31e-15!23;UBERON:0003351!2.31e-15!23;UBERON:0009113!2.31e-15!23;UBERON:0003295!2.31e-15!23;UBERON:0009722!2.31e-15!23;UBERON:0005562!2.31e-15!23;UBERON:0007690!2.31e-15!23;UBERON:0006562!1.26e-14!24;UBERON:0003408!1.26e-14!24;UBERON:0001557!1.26e-14!24;UBERON:0001042!1.26e-14!24;UBERON:0008814!1.26e-14!24;UBERON:0009145!1.26e-14!24;UBERON:0000072!9.69e-13!27;UBERON:0002405!1.76e-12!70;UBERON:0000065!1.45e-10!41;UBERON:0001004!3.01e-10!42;UBERON:0003081!3.53e-10!88;UBERON:0005057!1.65e-09!51;UBERON:0000063!2.68e-09!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0.159544317990673,0.684802919724823,0.262261207256992,0,0,0,0.473193248037357,0.274228867211478,1.27316895539409,0,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,4.53013036355888,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0.194915761479505,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:81997354..81997363,- | |||
}} |
Revision as of 11:20, 13 September 2013
Short description: | p@chr15:81997354..81997363, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:81997354..81997363, - |
Coexpression cluster: | MCL_coexpression_mm9:458 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.06e-23 | 1 |
B cell | 3.06e-23 | 1 |
pro-B cell | 3.06e-23 | 1 |
CD8-positive, alpha-beta T cell | 1.39e-22 | 1 |
lymphoid lineage restricted progenitor cell | 3.40e-17 | 12 |
lymphocyte | 5.98e-16 | 13 |
common lymphoid progenitor | 5.98e-16 | 13 |
hematopoietic lineage restricted progenitor cell | 9.61e-15 | 25 |
leukocyte | 2.01e-12 | 17 |
nongranular leukocyte | 2.01e-12 | 17 |
hematopoietic cell | 1.03e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.03e-11 | 32 |
hematopoietic stem cell | 1.03e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.03e-11 | 32 |
mature alpha-beta T cell | 1.13e-10 | 9 |
alpha-beta T cell | 1.13e-10 | 9 |
immature T cell | 1.13e-10 | 9 |
mature T cell | 1.13e-10 | 9 |
immature alpha-beta T cell | 1.13e-10 | 9 |
T cell | 6.35e-09 | 11 |
pro-T cell | 6.35e-09 | 11 |
connective tissue cell | 2.15e-08 | 46 |
mesenchymal cell | 2.15e-08 | 46 |
motile cell | 2.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.15e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.