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FFCP PHASE1:Mm9::chr15:99223663..99223679,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=110213|HGNC=|MCL_coexpression_id=247|UniProt=Q9D2C7|association_with_transcript=13bp_to_ENSMUST00000159209,NM_001171035,uc011zzf.1_5end|description=CAGE_peak_5_at_Tmbim6_5end|id=chr15:99223663..99223679,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,4.06e-08,8;CL:0000333,2.49e-07,10;CL:0000095,2.49e-07,10;CL:0000243,2.49e-07,10;CL:0000123,2.49e-07,10;CL:0000125,2.49e-07,10;CL:0000030,2.49e-07,10;CL:0000339,2.49e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.00e-08!52;UBERON:0005068!1.00e-08!52;UBERON:0006241!1.00e-08!52;UBERON:0007135!1.00e-08!52;UBERON:0000955!2.13e-08!50;UBERON:0006238!2.13e-08!50;UBERON:0002616!5.29e-08!49;UBERON:0001017!2.02e-07!73;UBERON:0005743!2.02e-07!73;UBERON:0002020!2.09e-07!34;UBERON:0000073!2.12e-07!75;UBERON:0001016!2.12e-07!75;UBERON:0002021!2.70e-07!10;UBERON:0000411!2.70e-07!10;UBERON:0001950!2.70e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.30e-15,54;UBERON:0001016,2.02e-13,75;UBERON:0001017,2.21e-13,73;UBERON:0001049,2.81e-13,52;UBERON:0005068,2.81e-13,52;UBERON:0006241,2.81e-13,52;UBERON:0007135,2.81e-13,52;UBERON:0004121,3.91e-11,95;UBERON:0000924,3.91e-11,95;UBERON:0006601,3.91e-11,95;UBERON:0002021,4.32e-11,10;UBERON:0000411,4.32e-11,10;UBERON:0001950,4.32e-11,10;UBERON:0000955,6.53e-11,47;UBERON:0006238,6.53e-11,47;UBERON:0002020,1.29e-10,34;UBERON:0002619,1.45e-10,17;UBERON:0002616,2.72e-10,46;UBERON:0000956,3.70e-09,21;UBERON:0001869,3.70e-09,21;UBERON:0000203,3.70e-09,21;UBERON:0002346,7.51e-09,64;UBERON:0003075,7.51e-09,64;UBERON:0007284,7.51e-09,64;UBERON:0003080,7.59e-09,40;UBERON:0002780,2.56e-08,39;UBERON:0001890,2.56e-08,39;UBERON:0006240,2.56e-08,39;UBERON:0010371,2.68e-08,73;UBERON:0003528,3.00e-08,29;UBERON:0002791,3.00e-08,29;UBERON:0001893,3.00e-08,29|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.503637815735669,0,0.129123323441576,0.563154888606667,0,0,0.159544317990673,0.342401459862411,0.34968160967599,0.333109761815663,0.202475267389826,0,0.630924330716475,0.548457734422955,0,3.31668831589172,0.297872853602656,0.261199789138935,0,0.91763712426868,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.886922042621219,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.204169356262369,2.51118978442145,0,1.0470474879476,1.76469446409304,0,0.485510353031154,1.1330713617802,1.82478476195126,1.10128051297009,3.12956537739216,1.96222640742402,3.95435128922049,3.30530828426282,1.53985063787899,2.87505128729943,0.838913030288682,0,1.00828139742739,0.514518872071894,4.01146815914259,1.03134418455488,0.606949382578793,0,0.633831403506179,2.71075625655306,2.66788438833342,8.99899717281399,9.88866362566974,13.4991221839759,3.59520132622086,9.22123932771731,0.311068836925433,0.270011876663381,0.210324961351382,3.71346279724945,4.19650227808066,0.122490799214954,0.191690942036473,0,3.30347642998166,3.19218345212969,2.76491759861238,0.923204014111357,0.548925861614458,0.52091337055676,0.837548997004143,1.68828783009504,3.51435969886663,2.06240009831567,3.41692033917847,0.559198337475902,0.302904773332736,1.13357340160178,0.289864488701678,1.72084775396277,0,1.61910957491345,1.94932925234301,0.896053774194671,0.702222100658759,1.1930122580464,1.55871602761721,1.7666978725517,0.281686839553361,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,1.82694207550496,1.29468941823586,0.742210695324124,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,0.587943535678524,1.0053327306374,1.48316980640624,1.87979163995885,0.884610551949874,0.647067399789637,0.441683036920787,0,3.72783522436244,0.878342391034642,0.41889341362691,0.255457055208591,0.718890747035522,0,0.254140454146129,1.9472783122627,2.28750301409313,0.753926112677186,4.69325664519146,4.85859368927628,1.24672826735736,1.29793010454206,0.712875546952214,0.870848794270651,1.51633655060205,0,0,0.689706313300419,0.360124259610698,0.30140963567143,0.272145996605311,0.12811372028485,0.468508622798644,0.776110112217047,0,0,0.175951124163949,1.09597866213787,0.278047249225598,0,0.61734640922383,0.796137067273973,0,0,1.13665399758237,0.207125772535502,0.703578179943289,0.720248245844059,0,0,0.154267112887378,0.232533944750408,0,0.350296027101508,0.493679549740441,0.985004784474571,0.486412857275134,0.438599962275997,0.219550115291051,0.268412837520744,2.10289948564127,1.13195073617213,0.660837565967596,0.793351699990633,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0,0.596869416123452,0.974820435595601,0,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,0,0,0.775809948670503,0.771494018793504,1.51767689098217,1.03327103585722,2.35498091762062,1.85095745882701,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.72353147925725,0,0.575392274901621,0.972811360650212,0.823684239564244,0,2.2328456860110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|EntrezGene=110213
|HGNC=
|MCL_coexpression_id=247
|UniProt=Q9D2C7
|association_with_transcript=13bp_to_ENSMUST00000159209,NM_001171035,uc011zzf.1_5end
|description=CAGE_peak_5_at_Tmbim6_5end
|id=chr15:99223663..99223679,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002453,4.06e-08,8;CL:0000333,2.49e-07,10;CL:0000095,2.49e-07,10;CL:0000243,2.49e-07,10;CL:0000123,2.49e-07,10;CL:0000125,2.49e-07,10;CL:0000030,2.49e-07,10;CL:0000339,2.49e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.00e-08!52;UBERON:0005068!1.00e-08!52;UBERON:0006241!1.00e-08!52;UBERON:0007135!1.00e-08!52;UBERON:0000955!2.13e-08!50;UBERON:0006238!2.13e-08!50;UBERON:0002616!5.29e-08!49;UBERON:0001017!2.02e-07!73;UBERON:0005743!2.02e-07!73;UBERON:0002020!2.09e-07!34;UBERON:0000073!2.12e-07!75;UBERON:0001016!2.12e-07!75;UBERON:0002021!2.70e-07!10;UBERON:0000411!2.70e-07!10;UBERON:0001950!2.70e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.30e-15,54;UBERON:0001016,2.02e-13,75;UBERON:0001017,2.21e-13,73;UBERON:0001049,2.81e-13,52;UBERON:0005068,2.81e-13,52;UBERON:0006241,2.81e-13,52;UBERON:0007135,2.81e-13,52;UBERON:0004121,3.91e-11,95;UBERON:0000924,3.91e-11,95;UBERON:0006601,3.91e-11,95;UBERON:0002021,4.32e-11,10;UBERON:0000411,4.32e-11,10;UBERON:0001950,4.32e-11,10;UBERON:0000955,6.53e-11,47;UBERON:0006238,6.53e-11,47;UBERON:0002020,1.29e-10,34;UBERON:0002619,1.45e-10,17;UBERON:0002616,2.72e-10,46;UBERON:0000956,3.70e-09,21;UBERON:0001869,3.70e-09,21;UBERON:0000203,3.70e-09,21;UBERON:0002346,7.51e-09,64;UBERON:0003075,7.51e-09,64;UBERON:0007284,7.51e-09,64;UBERON:0003080,7.59e-09,40;UBERON:0002780,2.56e-08,39;UBERON:0001890,2.56e-08,39;UBERON:0006240,2.56e-08,39;UBERON:0010371,2.68e-08,73;UBERON:0003528,3.00e-08,29;UBERON:0002791,3.00e-08,29;UBERON:0001893,3.00e-08,29
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.503637815735669,0,0.129123323441576,0.563154888606667,0,0,0.159544317990673,0.342401459862411,0.34968160967599,0.333109761815663,0.202475267389826,0,0.630924330716475,0.548457734422955,0,3.31668831589172,0.297872853602656,0.261199789138935,0,0.91763712426868,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.886922042621219,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.204169356262369,2.51118978442145,0,1.0470474879476,1.76469446409304,0,0.485510353031154,1.1330713617802,1.82478476195126,1.10128051297009,3.12956537739216,1.96222640742402,3.95435128922049,3.30530828426282,1.53985063787899,2.87505128729943,0.838913030288682,0,1.00828139742739,0.514518872071894,4.01146815914259,1.03134418455488,0.606949382578793,0,0.633831403506179,2.71075625655306,2.66788438833342,8.99899717281399,9.88866362566974,13.4991221839759,3.59520132622086,9.22123932771731,0.311068836925433,0.270011876663381,0.210324961351382,3.71346279724945,4.19650227808066,0.122490799214954,0.191690942036473,0,3.30347642998166,3.19218345212969,2.76491759861238,0.923204014111357,0.548925861614458,0.52091337055676,0.837548997004143,1.68828783009504,3.51435969886663,2.06240009831567,3.41692033917847,0.559198337475902,0.302904773332736,1.13357340160178,0.289864488701678,1.72084775396277,0,1.61910957491345,1.94932925234301,0.896053774194671,0.702222100658759,1.1930122580464,1.55871602761721,1.7666978725517,0.281686839553361,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0.505524445014783,1.82694207550496,1.29468941823586,0.742210695324124,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,0.587943535678524,1.0053327306374,1.48316980640624,1.87979163995885,0.884610551949874,0.647067399789637,0.441683036920787,0,3.72783522436244,0.878342391034642,0.41889341362691,0.255457055208591,0.718890747035522,0,0.254140454146129,1.9472783122627,2.28750301409313,0.753926112677186,4.69325664519146,4.85859368927628,1.24672826735736,1.29793010454206,0.712875546952214,0.870848794270651,1.51633655060205,0,0,0.689706313300419,0.360124259610698,0.30140963567143,0.272145996605311,0.12811372028485,0.468508622798644,0.776110112217047,0,0,0.175951124163949,1.09597866213787,0.278047249225598,0,0.61734640922383,0.796137067273973,0,0,1.13665399758237,0.207125772535502,0.703578179943289,0.720248245844059,0,0,0.154267112887378,0.232533944750408,0,0.350296027101508,0.493679549740441,0.985004784474571,0.486412857275134,0.438599962275997,0.219550115291051,0.268412837520744,2.10289948564127,1.13195073617213,0.660837565967596,0.793351699990633,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0,0.596869416123452,0.974820435595601,0,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,0,0,0.775809948670503,0.771494018793504,1.51767689098217,1.03327103585722,2.35498091762062,1.85095745882701,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.72353147925725,0,0.575392274901621,0.972811360650212,0.823684239564244,0,2.23284568601102,0.936113019343682,1.51547326768267,0.717589654087649,0,0.554259570499814,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.630540576424764,0.8858587585951,0.159454768657487,1.47476983244164,0.863424909329478,0.578596234326046,3.01582567878545,6.52686820582452,0.983528546038072,1.65562047782839,1.9266070798535,1.87538698547525,1.3114795630134,0.757412781613119,0,0,0,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.395287777946524,2.57057053137446,0.99358059645788,0.534196811001766,0.651547837414304,0.824850614862677,0,0.971122544619926,0.604647113929502,0.565815239267694,1.47650946440386,1.22974059177571,0.258428293168221,0,0.712994756769443,0.632073515871632,0,1.03135543248187,1.36175842301515,0,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,1.64549020602121,1.8267896946876,1.17335854031855,2.96564899209348,0.220528398054962,0.32977250588296,0.807322133479528,0.542816324353403,1.07435109602823,1.14898629821543,0.291480836629851,2.22510362412612,0.854354403989263,1.03193433981611,0.740778109478847,0.376736914009382,0,0.457556346413045,0.169978429993855,0.559805809294632,0.552799895217695,0.954670618015114,0,0.609958401380546,0.324016022465404,0.418176592028937,0.655087691238533,0.404593039154462,0.41326727862668,1.04702376793612,0.90730481304255,3.72803587852155,7.32800820289447,0.299033092087958,0.66183396182839,0.583353565032143,0.645799117388655,0.675824501963113,0.469428954583016,1.0416350787516,0.524296722128554,2.65742532908607,5.76060012515731,0.632022241256357,0.405450430580328,0.410843828659309,0,0.537080087002444,0.79472541912506,0.120195449519969,0.295379054349154,0,0.304827226619999,0.201652370273681,0.0974578807397524,0.288635524920988,0.233753804363138,0,0.443971906748129,0.269141569828427,0.335769232728157,0.386379188064381,0.750729901804728,0.36630324853453,0,2.00628841614145,3.95326289831947,4.14292712856459,4.01026859407578,7.90524638780963,2.05524755931193,6.0431511791176,2.70009000092722,4.95353323546643,3.62513927187364,5.1776031175182,0.207574695168353,0.798049746802062,0.512200817262403,0.729320151204882,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0,0.754505365544305,0.655490552289177,1.02440243847791,0.918967503289812,0,0.579421629724277,0.77163688185482,0.412085900803307,0.294397840268795,0,0.70990322463735,0.715308569841963,0.436039249896986,0.564656282491984,0.423073039458382,0.73171189149109,0.263069711437843,0.679020569229309,0,0.237270036248348,0.689531376628944,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.882365676478062,0.695603506861264
|short_description=p5@Tmbim6
}}

Revision as of 11:52, 13 September 2013

Short description:p5@Tmbim6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tmbim6_5end
Coexpression cluster:MCL_coexpression_mm9:247
Association with transcript: 13bp_to_ENSMUST00000159209, NM_001171035, uc011zzf.1_5end
EntrezGene:Tmbim6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Tmbim6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.30e-1554
nervous system2.02e-1375
central nervous system2.21e-1373
neural tube2.81e-1352
neural rod2.81e-1352
future spinal cord2.81e-1352
neural keel2.81e-1352
ectoderm-derived structure3.91e-1195
ectoderm3.91e-1195
presumptive ectoderm3.91e-1195
occipital lobe4.32e-1110
visual cortex4.32e-1110
neocortex4.32e-1110
brain6.53e-1147
future brain6.53e-1147
gray matter1.29e-1034
regional part of cerebral cortex1.45e-1017
regional part of brain2.72e-1046
cerebral cortex3.70e-0921
cerebral hemisphere3.70e-0921
pallium3.70e-0921
neurectoderm7.51e-0964
neural plate7.51e-0964
presumptive neural plate7.51e-0964
anterior neural tube7.59e-0940
regional part of forebrain2.56e-0839
forebrain2.56e-0839
future forebrain2.56e-0839
ecto-epithelium2.68e-0873
brain grey matter3.00e-0829
regional part of telencephalon3.00e-0829
telencephalon3.00e-0829







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