FFCP PHASE1:Mm9::chr16:10488268..10488297,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12265|HGNC=|MCL_coexpression_id=18|UniProt=Q8HW99,P79621,Q3U5G4|association_with_transcript=0bp_to_ENSMUST00000168881,NM_007575_5end|description=CAGE_peak_5_at_Ciita_5end|id=chr16:10488268..10488297,+|ontology_enrichment_celltype=CL:0000553!4.95e-10!6;CL:0000556!4.95e-10!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.66e-22,6;CL:0000556,1.66e-22,6;CL:0000050,5.49e-15,9;CL:0000839,2.44e-10,13;CL:0002031,7.45e-10,25;CL:0000763,2.27e-08,16;CL:0002027,8.73e-08,3;CL:0002006,8.73e-08,3;CL:0002024,8.73e-08,3;CL:0000988,1.53e-07,32;CL:0002032,1.53e-07,32;CL:0000037,1.53e-07,32;CL:0000837,1.53e-07,32;CL:0000049,5.10e-07,19;CL:0000945,8.36e-07,1;CL:0000236,8.36e-07,1;CL:0000826,8.36e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.50e-15!48;UBERON:0002390!6.30e-12!45;UBERON:0003061!6.30e-12!45;UBERON:0004177!4.24e-09!29;UBERON:0002405!1.20e-08!70;UBERON:0003081!1.88e-08!88;UBERON:0001004!3.28e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.78e-16,3;UBERON:0002193,2.76e-14,48;UBERON:0002405,2.76e-14,48;UBERON:0001962,3.42e-11,2;UBERON:0001961,3.42e-11,2;UBERON:0001744,3.42e-11,2;UBERON:0002106,1.36e-08,6;UBERON:0004457,1.36e-08,6;UBERON:0000042,1.36e-08,6;UBERON:0004854,1.36e-08,6;UBERON:0009034,1.36e-08,6;UBERON:0002095,1.36e-08,6;UBERON:0004782,1.36e-08,6;UBERON:0003281,1.36e-08,6;UBERON:0009664,1.36e-08,6;UBERON:0002296,1.36e-08,6;UBERON:0005602,1.36e-08,6;UBERON:0001179,1.36e-08,6;UBERON:0006293,1.36e-08,6;UBERON:0002390,1.75e-08,45;UBERON:0003061,1.75e-08,45;UBERON:0002371,2.27e-08,16;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,1.66554880907831,3.44207954562704,0.699561878128147,25.7101664766964,26.4630856859076,23.3414308488917,0.0850432901510698,1.39007331681239,0.522399578277871,2.23989391910769,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,18.1205214542355,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,14.2415836005944,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.690739927463582,0.433947175744535,0,0.54390568381871,0.491764273019036,1.10374698521893,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,6.66396435111626,0,0.185194527369712,0.753473828018764,7.38148829693536,5.71945433016307,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0.129920822977795,0.716106782669926,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.302478555410522,0.38983152295901,0.769694733122636,0.350630706544707,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0|short_description=p5@Ciita}} | ||
|EntrezGene=12265 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=Q8HW99,P79621,Q3U5G4 | |||
|association_with_transcript=0bp_to_ENSMUST00000168881,NM_007575_5end | |||
|description=CAGE_peak_5_at_Ciita_5end | |||
|id=chr16:10488268..10488297,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.95e-10!6;CL:0000556!4.95e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.66e-22,6;CL:0000556,1.66e-22,6;CL:0000050,5.49e-15,9;CL:0000839,2.44e-10,13;CL:0002031,7.45e-10,25;CL:0000763,2.27e-08,16;CL:0002027,8.73e-08,3;CL:0002006,8.73e-08,3;CL:0002024,8.73e-08,3;CL:0000988,1.53e-07,32;CL:0002032,1.53e-07,32;CL:0000037,1.53e-07,32;CL:0000837,1.53e-07,32;CL:0000049,5.10e-07,19;CL:0000945,8.36e-07,1;CL:0000236,8.36e-07,1;CL:0000826,8.36e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.50e-15!48;UBERON:0002390!6.30e-12!45;UBERON:0003061!6.30e-12!45;UBERON:0004177!4.24e-09!29;UBERON:0002405!1.20e-08!70;UBERON:0003081!1.88e-08!88;UBERON:0001004!3.28e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.78e-16,3;UBERON:0002193,2.76e-14,48;UBERON:0002405,2.76e-14,48;UBERON:0001962,3.42e-11,2;UBERON:0001961,3.42e-11,2;UBERON:0001744,3.42e-11,2;UBERON:0002106,1.36e-08,6;UBERON:0004457,1.36e-08,6;UBERON:0000042,1.36e-08,6;UBERON:0004854,1.36e-08,6;UBERON:0009034,1.36e-08,6;UBERON:0002095,1.36e-08,6;UBERON:0004782,1.36e-08,6;UBERON:0003281,1.36e-08,6;UBERON:0009664,1.36e-08,6;UBERON:0002296,1.36e-08,6;UBERON:0005602,1.36e-08,6;UBERON:0001179,1.36e-08,6;UBERON:0006293,1.36e-08,6;UBERON:0002390,1.75e-08,45;UBERON:0003061,1.75e-08,45;UBERON:0002371,2.27e-08,16;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,1.66554880907831,3.44207954562704,0.699561878128147,25.7101664766964,26.4630856859076,23.3414308488917,0.0850432901510698,1.39007331681239,0.522399578277871,2.23989391910769,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,18.1205214542355,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,14.2415836005944,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.690739927463582,0.433947175744535,0,0.54390568381871,0.491764273019036,1.10374698521893,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,6.66396435111626,0,0.185194527369712,0.753473828018764,7.38148829693536,5.71945433016307,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0.129920822977795,0.716106782669926,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.302478555410522,0.38983152295901,0.769694733122636,0.350630706544707,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | |||
|short_description=p5@Ciita | |||
}} |
Revision as of 11:55, 13 September 2013
Short description: | p5@Ciita |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ciita_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 0bp_to_ENSMUST00000168881, NM_007575_5end |
EntrezGene: | Ciita |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.66e-22 | 6 |
megakaryocyte | 1.66e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 5.49e-15 | 9 |
myeloid lineage restricted progenitor cell | 2.44e-10 | 13 |
hematopoietic lineage restricted progenitor cell | 7.45e-10 | 25 |
myeloid cell | 2.27e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 8.73e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.73e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.73e-08 | 3 |
hematopoietic cell | 1.53e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.53e-07 | 32 |
hematopoietic stem cell | 1.53e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.53e-07 | 32 |
common myeloid progenitor | 5.10e-07 | 19 |
lymphocyte of B lineage | 8.36e-07 | 1 |
B cell | 8.36e-07 | 1 |
pro-B cell | 8.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.78e-16 | 3 |
hemolymphoid system | 2.76e-14 | 48 |
immune system | 2.76e-14 | 48 |
gut-associated lymphoid tissue | 3.42e-11 | 2 |
mucosa-associated lymphoid tissue | 3.42e-11 | 2 |
lymphoid tissue | 3.42e-11 | 2 |
spleen | 1.36e-08 | 6 |
cavity lining | 1.36e-08 | 6 |
serous membrane | 1.36e-08 | 6 |
gastrointestinal system mesentery | 1.36e-08 | 6 |
stomach region | 1.36e-08 | 6 |
mesentery | 1.36e-08 | 6 |
gastrointestinal system serosa | 1.36e-08 | 6 |
mesentery of stomach | 1.36e-08 | 6 |
gut mesentery | 1.36e-08 | 6 |
dorsal mesentery | 1.36e-08 | 6 |
dorsal mesogastrium | 1.36e-08 | 6 |
peritoneal cavity | 1.36e-08 | 6 |
spleen primordium | 1.36e-08 | 6 |
hematopoietic system | 1.75e-08 | 45 |
blood island | 1.75e-08 | 45 |
bone marrow | 2.27e-08 | 16 |
lymph node | 9.48e-07 | 1 |
axillary lymph node | 9.48e-07 | 1 |
peripheral lymph node | 9.48e-07 | 1 |
shoulder | 9.48e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.