FFCP PHASE1:Mm9::chr16:18249324..18249346,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19385|HGNC=|MCL_coexpression_id=7|UniProt=P34022|association_with_transcript=-499bp_to_ENSMUST00000115645_5end|description=CAGE_peak_4_at_Ranbp1_5end|id=chr16:18249324..18249346,-|ontology_enrichment_celltype=CL:0000542!3.48e-09!13;CL:0000051!3.48e-09!13;CL:0000838!1.00e-08!12;CL:0000084!2.11e-08!11;CL:0000827!2.11e-08!11;CL:0000791!3.80e-07!9;CL:0000789!3.80e-07!9;CL:0002420!3.80e-07!9;CL:0002419!3.80e-07!9;CL:0000790!3.80e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,3.18e-39,9;CL:0000789,3.18e-39,9;CL:0002420,3.18e-39,9;CL:0002419,3.18e-39,9;CL:0000790,3.18e-39,9;CL:0000084,3.91e-32,11;CL:0000827,3.91e-32,11;CL:0000624,8.23e-31,8;CL:0000838,1.79e-29,12;CL:0000542,3.22e-27,13;CL:0000051,3.22e-27,13;CL:0000893,1.46e-26,6;CL:0002489,1.46e-26,6;CL:0000898,1.46e-26,6;CL:0000809,1.46e-26,6;CL:0000810,1.46e-26,6;CL:0000895,1.46e-26,6;CL:0000808,1.46e-26,6;CL:0000894,1.46e-26,6;CL:0000806,1.46e-26,6;CL:0000807,1.46e-26,6;CL:0000805,1.46e-26,6;CL:0002425,1.46e-26,6;CL:0002436,1.46e-26,6;CL:0002427,1.46e-26,6;CL:0002428,1.46e-26,6;CL:0002429,1.46e-26,6;CL:0002433,1.46e-26,6;CL:0002431,1.46e-26,6;CL:0002432,1.46e-26,6;CL:0000738,7.58e-21,17;CL:0002087,7.58e-21,17;CL:0000988,2.32e-19,32;CL:0002032,2.32e-19,32;CL:0000037,2.32e-19,32;CL:0000837,2.32e-19,32;CL:0002031,3.40e-14,25;CL:0002320,2.04e-13,46;CL:0000134,2.04e-13,46;CL:0000219,2.15e-11,54;CL:0000625,2.90e-11,1;CL:0000034,7.32e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!1.05e-07!24;UBERON:0002370!3.89e-07!23;UBERON:0000974!3.89e-07!23;UBERON:0004807!3.89e-07!23;UBERON:0005058!3.89e-07!23;UBERON:0003351!3.89e-07!23;UBERON:0009113!3.89e-07!23;UBERON:0003295!3.89e-07!23;UBERON:0009722!3.89e-07!23;UBERON:0005562!3.89e-07!23;UBERON:0007690!3.89e-07!23;UBERON:0000072!5.17e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.04e-13,46;UBERON:0002370,3.22e-07,23;UBERON:0000974,3.22e-07,23;UBERON:0004807,3.22e-07,23;UBERON:0005058,3.22e-07,23;UBERON:0003351,3.22e-07,23;UBERON:0009113,3.22e-07,23;UBERON:0003295,3.22e-07,23;UBERON:0009722,3.22e-07,23;UBERON:0005562,3.22e-07,23;UBERON:0007690,3.22e-07,23;UBERON:0006562,6.26e-07,24;UBERON:0003408,6.26e-07,24;UBERON:0001557,6.26e-07,24;UBERON:0001042,6.26e-07,24;UBERON:0008814,6.26e-07,24;UBERON:0009145,6.26e-07,24|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,17.1762241025033,16.8526458951835,1.19852577757853,2.15384829287408,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0,0.42438965179803,0.0850432901510698,0.496454756004426,0.783599367416806,0.159992422793407,0,0,0,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0.335565212115473,2.17608642603403,6.04968838456435,0.257259436035947,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0.210324961351382,0.856952953211411,0.662605622854841,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0,0.294628585473668,0.427115042397309,0,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0.432982082022428,0.760079596425296,0,0.22836775943812,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.381210681219194,0,0,0,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0,0.390361328888111,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0,0,2.1066395619397,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,0.631016438832513,0,0.430846795465598,0.477937595905104,0,0,0.404810701674894,0,0.790575555893047,0,0,0.534196811001766,0,0.164970122972535,0,0.728341908464944,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,0.161464426695906,0.241251699712623,0.119372344003136,0.492422699235184,0,0,0,0,0,0.188368457004691,0.27338845544205,0,1.01987057996313,0,0.552799895217695,0,0,0.203319467126849,0.324016022465404,0,0,0,0,0,0,0.6213393130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| ||
|EntrezGene=19385 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=P34022 | |||
|association_with_transcript=-499bp_to_ENSMUST00000115645_5end | |||
|description=CAGE_peak_4_at_Ranbp1_5end | |||
|id=chr16:18249324..18249346,- | |||
|ontology_enrichment_celltype=CL:0000542!3.48e-09!13;CL:0000051!3.48e-09!13;CL:0000838!1.00e-08!12;CL:0000084!2.11e-08!11;CL:0000827!2.11e-08!11;CL:0000791!3.80e-07!9;CL:0000789!3.80e-07!9;CL:0002420!3.80e-07!9;CL:0002419!3.80e-07!9;CL:0000790!3.80e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.18e-39,9;CL:0000789,3.18e-39,9;CL:0002420,3.18e-39,9;CL:0002419,3.18e-39,9;CL:0000790,3.18e-39,9;CL:0000084,3.91e-32,11;CL:0000827,3.91e-32,11;CL:0000624,8.23e-31,8;CL:0000838,1.79e-29,12;CL:0000542,3.22e-27,13;CL:0000051,3.22e-27,13;CL:0000893,1.46e-26,6;CL:0002489,1.46e-26,6;CL:0000898,1.46e-26,6;CL:0000809,1.46e-26,6;CL:0000810,1.46e-26,6;CL:0000895,1.46e-26,6;CL:0000808,1.46e-26,6;CL:0000894,1.46e-26,6;CL:0000806,1.46e-26,6;CL:0000807,1.46e-26,6;CL:0000805,1.46e-26,6;CL:0002425,1.46e-26,6;CL:0002436,1.46e-26,6;CL:0002427,1.46e-26,6;CL:0002428,1.46e-26,6;CL:0002429,1.46e-26,6;CL:0002433,1.46e-26,6;CL:0002431,1.46e-26,6;CL:0002432,1.46e-26,6;CL:0000738,7.58e-21,17;CL:0002087,7.58e-21,17;CL:0000988,2.32e-19,32;CL:0002032,2.32e-19,32;CL:0000037,2.32e-19,32;CL:0000837,2.32e-19,32;CL:0002031,3.40e-14,25;CL:0002320,2.04e-13,46;CL:0000134,2.04e-13,46;CL:0000219,2.15e-11,54;CL:0000625,2.90e-11,1;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.05e-07!24;UBERON:0002370!3.89e-07!23;UBERON:0000974!3.89e-07!23;UBERON:0004807!3.89e-07!23;UBERON:0005058!3.89e-07!23;UBERON:0003351!3.89e-07!23;UBERON:0009113!3.89e-07!23;UBERON:0003295!3.89e-07!23;UBERON:0009722!3.89e-07!23;UBERON:0005562!3.89e-07!23;UBERON:0007690!3.89e-07!23;UBERON:0000072!5.17e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.04e-13,46;UBERON:0002370,3.22e-07,23;UBERON:0000974,3.22e-07,23;UBERON:0004807,3.22e-07,23;UBERON:0005058,3.22e-07,23;UBERON:0003351,3.22e-07,23;UBERON:0009113,3.22e-07,23;UBERON:0003295,3.22e-07,23;UBERON:0009722,3.22e-07,23;UBERON:0005562,3.22e-07,23;UBERON:0007690,3.22e-07,23;UBERON:0006562,6.26e-07,24;UBERON:0003408,6.26e-07,24;UBERON:0001557,6.26e-07,24;UBERON:0001042,6.26e-07,24;UBERON:0008814,6.26e-07,24;UBERON:0009145,6.26e-07,24 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,17.1762241025033,16.8526458951835,1.19852577757853,2.15384829287408,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0,0.42438965179803,0.0850432901510698,0.496454756004426,0.783599367416806,0.159992422793407,0,0,0,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0.335565212115473,2.17608642603403,6.04968838456435,0.257259436035947,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0.210324961351382,0.856952953211411,0.662605622854841,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0,0.294628585473668,0.427115042397309,0,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0.432982082022428,0.760079596425296,0,0.22836775943812,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.19980546198682,0.381210681219194,0,0,0,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0,0.390361328888111,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0,0,2.1066395619397,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,0.631016438832513,0,0.430846795465598,0.477937595905104,0,0,0.404810701674894,0,0.790575555893047,0,0,0.534196811001766,0,0.164970122972535,0,0.728341908464944,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,0.161464426695906,0.241251699712623,0.119372344003136,0.492422699235184,0,0,0,0,0,0.188368457004691,0.27338845544205,0,1.01987057996313,0,0.552799895217695,0,0,0.203319467126849,0.324016022465404,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0.13020438484395,0.524296722128554,0,0.576060012515731,0.316011120628178,0.810900861160657,0.616265742988964,0.51968329191118,0.895133478337407,0.198681354781265,0.480781798079875,0.295379054349154,0.807731599585181,0.15241361331,0.504130925684203,0.194915761479505,0.288635524920988,0,0,0.221985953374065,0.0897138566094757,0.671538465456314,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.31136204275253,0,0,0,0,0.367687016900028,0,0,0,0,0,0.188626341386076,0.280924522409647,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0,0.188218760830661,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p4@Ranbp1 | |||
}} |
Revision as of 12:05, 13 September 2013
Short description: | p4@Ranbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ranbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -499bp_to_ENSMUST00000115645_5end |
EntrezGene: | Ranbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.04e-13 | 46 |
thymus | 3.22e-07 | 23 |
neck | 3.22e-07 | 23 |
respiratory system epithelium | 3.22e-07 | 23 |
hemolymphoid system gland | 3.22e-07 | 23 |
pharyngeal epithelium | 3.22e-07 | 23 |
thymic region | 3.22e-07 | 23 |
pharyngeal gland | 3.22e-07 | 23 |
entire pharyngeal arch endoderm | 3.22e-07 | 23 |
thymus primordium | 3.22e-07 | 23 |
early pharyngeal endoderm | 3.22e-07 | 23 |
pharynx | 6.26e-07 | 24 |
gland of gut | 6.26e-07 | 24 |
upper respiratory tract | 6.26e-07 | 24 |
chordate pharynx | 6.26e-07 | 24 |
pharyngeal arch system | 6.26e-07 | 24 |
pharyngeal region of foregut | 6.26e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.