FFCP PHASE1:Mm9::chr16:20426448..20426459,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27416|HGNC=|MCL_coexpression_id=64|UniProt=Q9R1X5,Q6P8Q2,Q8CFP9|association_with_transcript=7bp_to_ENSMUST00000079158,NM_013790,NM_176839,uc007ypp.1,uc007ypq.1,uc007yps.1,uc007ypt.1_5end|description=CAGE_peak_4_at_Abcc5_5end|id=chr16:20426448..20426459,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!3.03e-10!114;UBERON:0000955!3.57e-09!50;UBERON:0006238!3.57e-09!50;UBERON:0000477!8.21e-09!154;UBERON:0002616!1.06e-08!49;UBERON:0004111!1.75e-08!122;UBERON:0000475!2.10e-08!200;UBERON:0002791!1.19e-07!29;UBERON:0003528!1.19e-07!29;UBERON:0001893!1.19e-07!29;UBERON:0001049!1.42e-07!52;UBERON:0005068!1.42e-07!52;UBERON:0006241!1.42e-07!52;UBERON:0007135!1.42e-07!52;UBERON:0002021!2.21e-07!10;UBERON:0000411!2.21e-07!10;UBERON:0001950!2.21e-07!10;UBERON:0002619!2.95e-07!17;UBERON:0002020!5.82e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.87e-10,114;UBERON:0002021,2.72e-09,10;UBERON:0000411,2.72e-09,10;UBERON:0001950,2.72e-09,10;UBERON:0004111,2.94e-09,122;UBERON:0000955,1.00e-08,47;UBERON:0006238,1.00e-08,47;UBERON:0002616,3.64e-08,46;UBERON:0000073,3.70e-08,54;UBERON:0003528,1.38e-07,29;UBERON:0002791,1.38e-07,29;UBERON:0001893,1.38e-07,29;UBERON:0001049,2.41e-07,52;UBERON:0005068,2.41e-07,52;UBERON:0006241,2.41e-07,52;UBERON:0007135,2.41e-07,52;UBERON:0003080,9.42e-07,40;UBERON:0002619,9.53e-07,17|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0,0.342401459862411,1.57356724354195,0,0.809901069559304,0.699561878128147,0,0.411343300817216,0,1.36069264241712,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0,0,0.443461021310609,0,0.61506478758457,15.8481681015439,0,0,0.408338712524738,1.25559489221072,1.5626706890476,0.523523743973798,0.588231488031014,0,0.485510353031154,2.26614272356039,2.63580021170738,1.10128051297009,0.782391344348039,0.436050312760893,0.878744730937887,1.94429899074283,0.839918529752175,0,0.503347818173209,0.725362142011344,0.336093799142464,1.28629718017973,3.43840127926508,2.57836046138721,1.01158230429799,1.05798195854407,0.633831403506179,0.338844532069132,0,1.7997994345628,0.988866362566974,1.4209602298922,0.299600110518405,0.768436610643109,0.622137673850866,1.35005938331691,0,1.14260393761521,0.662605622854841,1.10241719293459,0.958454710182364,0.919218786610021,2.20231761998777,1.53224805702225,2.61131106535614,1.45074916503213,0.640413505216868,0.52091337055676,3.35019598801657,1.12552522006336,2.29197371665215,0.589257170947335,0.996601765593721,0.559198337475902,0.37863096666592,0.831287161174641,1.73918693221007,0,0,0,0.649776417447669,0,1.54488862144927,1.53387290320252,0.779358013808606,0,0.422530259330042,2.56652954828636,5.09610479413291,0,0,0.760079596425296,0,0.34255163915718,1.55362730188303,0.890652834388949,0.693941307064543,0.913396434936424,0.691846491768175,1.50722640552623,1.52865319276416,1.0053327306374,3.46072954828123,1.15679485535929,2.65383165584962,0.808834249737046,0.220841518460394,0.484875253135222,0,3.22058876712702,3.97948742945565,0.255457055208591,0,0.599902730993408,0.381210681219194,3.59497534571574,3.66000482254901,1.00523481690292,2.25971616249959,3.83573185995496,1.24672826735736,3.0825839982874,1.42575109390443,1.36847667671102,0.505445516867349,0.210441855886474,0.390361328888111,0.459804208866946,0.720248519221397,0.452114453507145,1.15662048557257,0.768682321709099,0.937017245597288,1.29351685369508,0,0.378212160335639,0.879755620819744,0.657587197282725,0.834141747676794,1.0447564995665,1.4404749548556,0,0,0.257347907114715,0,0.414251545071004,1.40715635988658,0.900310307305074,0.710234206755631,1.18058539048442,1.3884040159864,0.697601834251224,0.268273401399619,1.28441876603886,0.329119699826961,1.31333971263276,1.37816976227955,1.60819986167866,1.09775057645525,1.61047702512446,2.94405927989778,0.720332286654991,0.330418782983798,0,0.213288250535234,1.16118335930219,0.38660238396628,1.00841762311671,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,0,0.994782360205754,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0.456994050438915,0,0.610953983535943,0.581857461502877,0.701358198903186,0.822074982615345,0.442830443938806,0.941992367048249,1.97435462274881,0,0.667380422864376,0.589676985339609,0.449724224769707,1.01430060694251,0.482354319504834,0.763877555344259,0.863088412352432,1.13494658742525,0.549122826376163,1.43768206527355,0.744281895337007,1.5601883655728,0.252578877947112,0.179397413521912,0,1.10851914099963,0.757965647081939,0.977789858652155,1.69745085775188,1.64283173801951,1.50755631697634,1.6663054862021,2.14647012643579,1.10344600874334,1.99318220683897,1.2756381492599,0.81931657357869,2.41758974612254,2.02508682014116,4.52373851817817,6.52686820582452,0,0,2.40825884981688,3.98519734413491,0.163934945376675,2.27223834483936,0.3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| ||
|EntrezGene=27416 | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|UniProt=Q9R1X5,Q6P8Q2,Q8CFP9 | |||
|association_with_transcript=7bp_to_ENSMUST00000079158,NM_013790,NM_176839,uc007ypp.1,uc007ypq.1,uc007yps.1,uc007ypt.1_5end | |||
|description=CAGE_peak_4_at_Abcc5_5end | |||
|id=chr16:20426448..20426459,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.03e-10!114;UBERON:0000955!3.57e-09!50;UBERON:0006238!3.57e-09!50;UBERON:0000477!8.21e-09!154;UBERON:0002616!1.06e-08!49;UBERON:0004111!1.75e-08!122;UBERON:0000475!2.10e-08!200;UBERON:0002791!1.19e-07!29;UBERON:0003528!1.19e-07!29;UBERON:0001893!1.19e-07!29;UBERON:0001049!1.42e-07!52;UBERON:0005068!1.42e-07!52;UBERON:0006241!1.42e-07!52;UBERON:0007135!1.42e-07!52;UBERON:0002021!2.21e-07!10;UBERON:0000411!2.21e-07!10;UBERON:0001950!2.21e-07!10;UBERON:0002619!2.95e-07!17;UBERON:0002020!5.82e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.87e-10,114;UBERON:0002021,2.72e-09,10;UBERON:0000411,2.72e-09,10;UBERON:0001950,2.72e-09,10;UBERON:0004111,2.94e-09,122;UBERON:0000955,1.00e-08,47;UBERON:0006238,1.00e-08,47;UBERON:0002616,3.64e-08,46;UBERON:0000073,3.70e-08,54;UBERON:0003528,1.38e-07,29;UBERON:0002791,1.38e-07,29;UBERON:0001893,1.38e-07,29;UBERON:0001049,2.41e-07,52;UBERON:0005068,2.41e-07,52;UBERON:0006241,2.41e-07,52;UBERON:0007135,2.41e-07,52;UBERON:0003080,9.42e-07,40;UBERON:0002619,9.53e-07,17 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0.516493293766305,0.140788722151667,0.234064526321993,0.171217968225505,0,0.342401459862411,1.57356724354195,0,0.809901069559304,0.699561878128147,0,0.411343300817216,0,1.36069264241712,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0,0,0.443461021310609,0,0.61506478758457,15.8481681015439,0,0,0.408338712524738,1.25559489221072,1.5626706890476,0.523523743973798,0.588231488031014,0,0.485510353031154,2.26614272356039,2.63580021170738,1.10128051297009,0.782391344348039,0.436050312760893,0.878744730937887,1.94429899074283,0.839918529752175,0,0.503347818173209,0.725362142011344,0.336093799142464,1.28629718017973,3.43840127926508,2.57836046138721,1.01158230429799,1.05798195854407,0.633831403506179,0.338844532069132,0,1.7997994345628,0.988866362566974,1.4209602298922,0.299600110518405,0.768436610643109,0.622137673850866,1.35005938331691,0,1.14260393761521,0.662605622854841,1.10241719293459,0.958454710182364,0.919218786610021,2.20231761998777,1.53224805702225,2.61131106535614,1.45074916503213,0.640413505216868,0.52091337055676,3.35019598801657,1.12552522006336,2.29197371665215,0.589257170947335,0.996601765593721,0.559198337475902,0.37863096666592,0.831287161174641,1.73918693221007,0,0,0,0.649776417447669,0,1.54488862144927,1.53387290320252,0.779358013808606,0,0.422530259330042,2.56652954828636,5.09610479413291,0,0,0.760079596425296,0,0.34255163915718,1.55362730188303,0.890652834388949,0.693941307064543,0.913396434936424,0.691846491768175,1.50722640552623,1.52865319276416,1.0053327306374,3.46072954828123,1.15679485535929,2.65383165584962,0.808834249737046,0.220841518460394,0.484875253135222,0,3.22058876712702,3.97948742945565,0.255457055208591,0,0.599902730993408,0.381210681219194,3.59497534571574,3.66000482254901,1.00523481690292,2.25971616249959,3.83573185995496,1.24672826735736,3.0825839982874,1.42575109390443,1.36847667671102,0.505445516867349,0.210441855886474,0.390361328888111,0.459804208866946,0.720248519221397,0.452114453507145,1.15662048557257,0.768682321709099,0.937017245597288,1.29351685369508,0,0.378212160335639,0.879755620819744,0.657587197282725,0.834141747676794,1.0447564995665,1.4404749548556,0,0,0.257347907114715,0,0.414251545071004,1.40715635988658,0.900310307305074,0.710234206755631,1.18058539048442,1.3884040159864,0.697601834251224,0.268273401399619,1.28441876603886,0.329119699826961,1.31333971263276,1.37816976227955,1.60819986167866,1.09775057645525,1.61047702512446,2.94405927989778,0.720332286654991,0.330418782983798,0,0.213288250535234,1.16118335930219,0.38660238396628,1.00841762311671,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,0,0.994782360205754,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0.456994050438915,0,0.610953983535943,0.581857461502877,0.701358198903186,0.822074982615345,0.442830443938806,0.941992367048249,1.97435462274881,0,0.667380422864376,0.589676985339609,0.449724224769707,1.01430060694251,0.482354319504834,0.763877555344259,0.863088412352432,1.13494658742525,0.549122826376163,1.43768206527355,0.744281895337007,1.5601883655728,0.252578877947112,0.179397413521912,0,1.10851914099963,0.757965647081939,0.977789858652155,1.69745085775188,1.64283173801951,1.50755631697634,1.6663054862021,2.14647012643579,1.10344600874334,1.99318220683897,1.2756381492599,0.81931657357869,2.41758974612254,2.02508682014116,4.52373851817817,6.52686820582452,0,0,2.40825884981688,3.98519734413491,0.163934945376675,2.27223834483936,0.315508219416257,0.390438744296638,0,0.716906393857656,0,0.849229592366497,0,0.584511715822624,1.97643888973262,3.21321316421807,0.99358059645788,1.06839362200353,0.651547837414304,1.81467135269789,1.32745138339963,0.485561272309963,0.604647113929502,0,0.295301892880773,0,0.516856586336442,0.363533729477506,1.06949213515416,0.948110273807448,1.05418608574999,2.06271086496374,1.02131881726136,0.36012218806262,0.258717367565509,0,0.532020700926821,0.535106452806212,0.164549020602121,1.522324745573,1.40803024838226,1.0591603543191,0.220528398054962,1.31909002353184,1.77610869365496,1.44751019827574,0.954978752025092,0.656563598980245,0.874442509889552,2.41052892613663,1.02522528478712,0.619160603889667,1.11116716421827,1.69531611304222,0.820165366326151,1.14389086603261,0,0.279902904647316,0.138199973804424,0,0.632671987162271,0.406638934253697,0.756037385752609,0.209088296014469,0.655087691238533,0.134864346384821,1.1571483801547,0.26175594198403,1.42576470620972,0,0,0.149516546043979,0.827292452285488,0.388902376688095,0.258319646955462,0.337912250981556,1.64300134104056,0.39061315453185,0.419437377702843,0.724752362478018,0.864090018773596,2.52808896502543,0,0.513554785824136,0.25984164595559,0.537080087002444,0.198681354781265,0.600977247599844,0.886137163047463,2.01932899896295,1.5241361331,2.41982844328417,1.46186821109629,2.11666051608725,4.20756847853648,0.226730383615211,0,0.448569283047378,0.167884616364078,1.15913756419314,1.12609485270709,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| |||
|short_description=p4@Abcc5 | |||
}} | |||
Revision as of 12:09, 13 September 2013
| Short description: | p4@Abcc5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Abcc5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:64 |
| Association with transcript: | 7bp_to_ENSMUST00000079158, NM_013790, NM_176839, uc007ypp.1, uc007ypq.1, uc007yps.1, uc007ypt.1_5end |
| EntrezGene: | Abcc5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| tube | 2.87e-10 | 114 |
| occipital lobe | 2.72e-09 | 10 |
| visual cortex | 2.72e-09 | 10 |
| neocortex | 2.72e-09 | 10 |
| anatomical conduit | 2.94e-09 | 122 |
| brain | 1.00e-08 | 47 |
| future brain | 1.00e-08 | 47 |
| regional part of brain | 3.64e-08 | 46 |
| regional part of nervous system | 3.70e-08 | 54 |
| brain grey matter | 1.38e-07 | 29 |
| regional part of telencephalon | 1.38e-07 | 29 |
| telencephalon | 1.38e-07 | 29 |
| neural tube | 2.41e-07 | 52 |
| neural rod | 2.41e-07 | 52 |
| future spinal cord | 2.41e-07 | 52 |
| neural keel | 2.41e-07 | 52 |
| anterior neural tube | 9.42e-07 | 40 |
| regional part of cerebral cortex | 9.53e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
