FFCP PHASE1:Mm9::chr17:29479800..29479805,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56462|HGNC=|UniProt=|association_with_transcript=69bp_to_ENSMUST00000132753_5end|description=CAGE_peak_4_at_Mtch1_5end|id=chr17:29479800..29479805,-|ontology_enrichment_celltype=CL:0000055!2.45e-16!50;CL:0000221!4.70e-16!44;CL:0000133!4.70e-16!44;CL:0002319!1.08e-15!43;CL:0000393!3.74e-14!39;CL:0000211!3.74e-14!39;CL:0000117!8.14e-14!23;CL:0000337!8.14e-14!23;CL:0002321!1.04e-13!70;CL:0000220!1.04e-13!70;CL:0000540!7.48e-13!33;CL:0000047!7.48e-13!33;CL:0000031!7.48e-13!33;CL:0000404!7.48e-13!33;CL:0000548!8.63e-11!115;CL:0000004!8.63e-11!115;CL:0000255!8.63e-11!115;CL:0002371!8.05e-10!118;CL:0000144!6.39e-09!121;CL:0000012!6.39e-09!121;CL:0000723!1.32e-08!91;CL:0000048!1.32e-08!91;CL:0000034!1.72e-07!97|ontology_enrichment_celltype_v019_2=CL:0000117,1.47e-25,23;CL:0000337,1.47e-25,23;CL:0002319,2.90e-23,43;CL:0000221,1.22e-22,44;CL:0000133,1.22e-22,44;CL:0000393,2.58e-18,39;CL:0000211,2.58e-18,39;CL:0000540,7.57e-17,33;CL:0000047,7.57e-17,33;CL:0000031,7.57e-17,33;CL:0000404,7.57e-17,33;CL:0002321,5.50e-16,70;CL:0000723,2.75e-12,91;CL:0000048,2.75e-12,91;CL:0000034,3.13e-11,97;CL:0002614,8.68e-10,3;CL:0002453,3.35e-09,8;CL:0002092,8.68e-09,3;CL:0002540,8.68e-09,3;CL:0000128,2.86e-08,6;CL:0000126,2.86e-08,6;CL:0000127,2.86e-08,6;CL:0000333,2.70e-07,10;CL:0000095,2.70e-07,10;CL:0000243,2.70e-07,10;CL:0000123,2.70e-07,10;CL:0000125,2.70e-07,10;CL:0000030,2.70e-07,10;CL:0000339,2.70e-07,10;CL:0002603,6.94e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.72e-13!73;UBERON:0005743!2.72e-13!73;UBERON:0000073!3.42e-13!75;UBERON:0001016!3.42e-13!75;UBERON:0002020!5.50e-12!34;UBERON:0004121!5.68e-10!102;UBERON:0000924!5.68e-10!102;UBERON:0006601!5.68e-10!102;UBERON:0001049!3.49e-09!52;UBERON:0005068!3.49e-09!52;UBERON:0006241!3.49e-09!52;UBERON:0007135!3.49e-09!52;UBERON:0002791!6.50e-09!29;UBERON:0003528!6.50e-09!29;UBERON:0001893!6.50e-09!29;UBERON:0002346!5.36e-08!71;UBERON:0003075!5.36e-08!71;UBERON:0007284!5.36e-08!71;UBERON:0000955!6.67e-08!50;UBERON:0006238!6.67e-08!50;UBERON:0002780!7.84e-08!39;UBERON:0001890!7.84e-08!39;UBERON:0006240!7.84e-08!39;UBERON:0002616!1.17e-07!49;UBERON:0003080!2.42e-07!40;UBERON:0000033!4.44e-07!63;UBERON:0003056!7.90e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.81e-19,34;UBERON:0001017,1.35e-18,73;UBERON:0001016,5.74e-18,75;UBERON:0000073,7.49e-18,54;UBERON:0001049,8.36e-15,52;UBERON:0005068,8.36e-15,52;UBERON:0006241,8.36e-15,52;UBERON:0007135,8.36e-15,52;UBERON:0004121,3.87e-13,95;UBERON:0000924,3.87e-13,95;UBERON:0006601,3.87e-13,95;UBERON:0003528,1.61e-12,29;UBERON:0002791,1.61e-12,29;UBERON:0001893,1.61e-12,29;UBERON:0002346,2.66e-11,64;UBERON:0003075,2.66e-11,64;UBERON:0007284,2.66e-11,64;UBERON:0002616,7.38e-10,46;UBERON:0002038,8.68e-10,3;UBERON:0009663,8.68e-10,3;UBERON:0009661,8.68e-10,3;UBERON:0000125,8.68e-10,3;UBERON:0002308,8.68e-10,3;UBERON:0001948,1.15e-09,5;UBERON:0002315,1.15e-09,5;UBERON:0000955,1.38e-09,47;UBERON:0006238,1.38e-09,47;UBERON:0010371,1.96e-09,73;UBERON:0010314,7.80e-09,92;UBERON:0002780,1.08e-08,39;UBERON:0001890,1.08e-08,39;UBERON:0006240,1.08e-08,39;UBERON:0003080,2.05e-08,40;UBERON:0003076,2.36e-08,12;UBERON:0003057,2.36e-08,12;UBERON:0002240,4.61e-08,6;UBERON:0005174,4.61e-08,6;UBERON:0001137,4.61e-08,6;UBERON:0000956,8.26e-08,21;UBERON:0001869,8.26e-08,21;UBERON:0000203,8.26e-08,21;UBERON:0002950,1.95e-07,4;UBERON:0001891,1.95e-07,4;UBERON:0009616,1.95e-07,4;UBERON:0010286,1.95e-07,4|phase1_expression=0.160148847104794,0,0,0.60492842261366,0,0.16787927191189,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,0.0992909512008853,0.261199789138935,0.319984845586813,0,0.57423196411502,0.430761996159075,0,0.570070258369122,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,1.56478268869608,2.61630187656536,0.219686182734472,2.13872888981712,2.37976916763116,0,0.167782606057736,0,0,0.771778308107841,2.29226751951005,2.57836046138721,0.606949382578793,2.11596391708813,1.26766280701236,1.0165335962074,0.889294796111139,1.3498495759221,1.97773272513395,1.4209602298922,0.898800331555214,1.92109152660777,1.03689612308478,3.24014251996058,0.841299845405528,1.99955689082663,1.76694832761291,0.367472397644862,1.0543001812006,0.919218786610021,0,1.78762273319263,1.99688493233117,0.791317726381163,2.47016637726506,0.52091337055676,2.23346399201105,2.8138130501584,1.83357897332172,2.35702868378934,2.13557521198654,0.931997229126503,0.151452386666368,0.0755715601067855,0,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0.681721290312231,0.519572009205738,0,0.422530259330042,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0.125654352112864,0.34764864038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| ||
|EntrezGene=56462 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=69bp_to_ENSMUST00000132753_5end | |||
|description=CAGE_peak_4_at_Mtch1_5end | |||
|id=chr17:29479800..29479805,- | |||
|ontology_enrichment_celltype=CL:0000055!2.45e-16!50;CL:0000221!4.70e-16!44;CL:0000133!4.70e-16!44;CL:0002319!1.08e-15!43;CL:0000393!3.74e-14!39;CL:0000211!3.74e-14!39;CL:0000117!8.14e-14!23;CL:0000337!8.14e-14!23;CL:0002321!1.04e-13!70;CL:0000220!1.04e-13!70;CL:0000540!7.48e-13!33;CL:0000047!7.48e-13!33;CL:0000031!7.48e-13!33;CL:0000404!7.48e-13!33;CL:0000548!8.63e-11!115;CL:0000004!8.63e-11!115;CL:0000255!8.63e-11!115;CL:0002371!8.05e-10!118;CL:0000144!6.39e-09!121;CL:0000012!6.39e-09!121;CL:0000723!1.32e-08!91;CL:0000048!1.32e-08!91;CL:0000034!1.72e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.47e-25,23;CL:0000337,1.47e-25,23;CL:0002319,2.90e-23,43;CL:0000221,1.22e-22,44;CL:0000133,1.22e-22,44;CL:0000393,2.58e-18,39;CL:0000211,2.58e-18,39;CL:0000540,7.57e-17,33;CL:0000047,7.57e-17,33;CL:0000031,7.57e-17,33;CL:0000404,7.57e-17,33;CL:0002321,5.50e-16,70;CL:0000723,2.75e-12,91;CL:0000048,2.75e-12,91;CL:0000034,3.13e-11,97;CL:0002614,8.68e-10,3;CL:0002453,3.35e-09,8;CL:0002092,8.68e-09,3;CL:0002540,8.68e-09,3;CL:0000128,2.86e-08,6;CL:0000126,2.86e-08,6;CL:0000127,2.86e-08,6;CL:0000333,2.70e-07,10;CL:0000095,2.70e-07,10;CL:0000243,2.70e-07,10;CL:0000123,2.70e-07,10;CL:0000125,2.70e-07,10;CL:0000030,2.70e-07,10;CL:0000339,2.70e-07,10;CL:0002603,6.94e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.72e-13!73;UBERON:0005743!2.72e-13!73;UBERON:0000073!3.42e-13!75;UBERON:0001016!3.42e-13!75;UBERON:0002020!5.50e-12!34;UBERON:0004121!5.68e-10!102;UBERON:0000924!5.68e-10!102;UBERON:0006601!5.68e-10!102;UBERON:0001049!3.49e-09!52;UBERON:0005068!3.49e-09!52;UBERON:0006241!3.49e-09!52;UBERON:0007135!3.49e-09!52;UBERON:0002791!6.50e-09!29;UBERON:0003528!6.50e-09!29;UBERON:0001893!6.50e-09!29;UBERON:0002346!5.36e-08!71;UBERON:0003075!5.36e-08!71;UBERON:0007284!5.36e-08!71;UBERON:0000955!6.67e-08!50;UBERON:0006238!6.67e-08!50;UBERON:0002780!7.84e-08!39;UBERON:0001890!7.84e-08!39;UBERON:0006240!7.84e-08!39;UBERON:0002616!1.17e-07!49;UBERON:0003080!2.42e-07!40;UBERON:0000033!4.44e-07!63;UBERON:0003056!7.90e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.81e-19,34;UBERON:0001017,1.35e-18,73;UBERON:0001016,5.74e-18,75;UBERON:0000073,7.49e-18,54;UBERON:0001049,8.36e-15,52;UBERON:0005068,8.36e-15,52;UBERON:0006241,8.36e-15,52;UBERON:0007135,8.36e-15,52;UBERON:0004121,3.87e-13,95;UBERON:0000924,3.87e-13,95;UBERON:0006601,3.87e-13,95;UBERON:0003528,1.61e-12,29;UBERON:0002791,1.61e-12,29;UBERON:0001893,1.61e-12,29;UBERON:0002346,2.66e-11,64;UBERON:0003075,2.66e-11,64;UBERON:0007284,2.66e-11,64;UBERON:0002616,7.38e-10,46;UBERON:0002038,8.68e-10,3;UBERON:0009663,8.68e-10,3;UBERON:0009661,8.68e-10,3;UBERON:0000125,8.68e-10,3;UBERON:0002308,8.68e-10,3;UBERON:0001948,1.15e-09,5;UBERON:0002315,1.15e-09,5;UBERON:0000955,1.38e-09,47;UBERON:0006238,1.38e-09,47;UBERON:0010371,1.96e-09,73;UBERON:0010314,7.80e-09,92;UBERON:0002780,1.08e-08,39;UBERON:0001890,1.08e-08,39;UBERON:0006240,1.08e-08,39;UBERON:0003080,2.05e-08,40;UBERON:0003076,2.36e-08,12;UBERON:0003057,2.36e-08,12;UBERON:0002240,4.61e-08,6;UBERON:0005174,4.61e-08,6;UBERON:0001137,4.61e-08,6;UBERON:0000956,8.26e-08,21;UBERON:0001869,8.26e-08,21;UBERON:0000203,8.26e-08,21;UBERON:0002950,1.95e-07,4;UBERON:0001891,1.95e-07,4;UBERON:0009616,1.95e-07,4;UBERON:0010286,1.95e-07,4 | |||
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|short_description=p4@Mtch1 | |||
}} |
Revision as of 13:59, 13 September 2013
Short description: | p4@Mtch1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mtch1_5end |
Coexpression cluster: | NA |
Association with transcript: | 69bp_to_ENSMUST00000132753_5end |
EntrezGene: | Mtch1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.47e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.47e-25 | 23 |
neural cell | 2.90e-23 | 43 |
ectodermal cell | 1.22e-22 | 44 |
neurectodermal cell | 1.22e-22 | 44 |
electrically responsive cell | 2.58e-18 | 39 |
electrically active cell | 2.58e-18 | 39 |
neuron | 7.57e-17 | 33 |
neuronal stem cell | 7.57e-17 | 33 |
neuroblast | 7.57e-17 | 33 |
electrically signaling cell | 7.57e-17 | 33 |
embryonic cell | 5.50e-16 | 70 |
somatic stem cell | 2.75e-12 | 91 |
multi fate stem cell | 2.75e-12 | 91 |
stem cell | 3.13e-11 | 97 |
neuron of the substantia nigra | 8.68e-10 | 3 |
oligodendrocyte precursor cell | 3.35e-09 | 8 |
bone marrow cell | 8.68e-09 | 3 |
mesenchymal stem cell of the bone marrow | 8.68e-09 | 3 |
oligodendrocyte | 2.86e-08 | 6 |
macroglial cell | 2.86e-08 | 6 |
astrocyte | 2.86e-08 | 6 |
migratory neural crest cell | 2.70e-07 | 10 |
neuron associated cell | 2.70e-07 | 10 |
glial cell (sensu Vertebrata) | 2.70e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.70e-07 | 10 |
glial cell | 2.70e-07 | 10 |
glioblast | 2.70e-07 | 10 |
glioblast (sensu Vertebrata) | 2.70e-07 | 10 |
astrocyte of the cerebellum | 6.94e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.