FFCP PHASE1:Mm9::chr17:52301956..52301965,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=319|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:52301956..52301965,-|id=chr17:52301956..52301965,-|ontology_enrichment_celltype=CL:0000791!1.72e-30!9;CL:0000789!1.72e-30!9;CL:0002420!1.72e-30!9;CL:0002419!1.72e-30!9;CL:0000790!1.72e-30!9;CL:0000838!1.04e-27!12;CL:0000624!2.86e-27!8;CL:0000542!1.96e-25!13;CL:0000051!1.96e-25!13;CL:0000084!1.17e-24!11;CL:0000827!1.17e-24!11;CL:0002031!2.03e-24!25;CL:0000988!5.61e-24!32;CL:0002032!5.61e-24!32;CL:0000037!5.61e-24!32;CL:0000566!5.61e-24!32;CL:0000837!5.61e-24!32;CL:0000893!7.76e-21!6;CL:0002489!7.76e-21!6;CL:0000898!7.76e-21!6;CL:0000809!7.76e-21!6;CL:0000810!7.76e-21!6;CL:0000895!7.76e-21!6;CL:0000808!7.76e-21!6;CL:0000894!7.76e-21!6;CL:0000806!7.76e-21!6;CL:0000807!7.76e-21!6;CL:0000805!7.76e-21!6;CL:0002425!7.76e-21!6;CL:0002436!7.76e-21!6;CL:0002427!7.76e-21!6;CL:0002428!7.76e-21!6;CL:0002429!7.76e-21!6;CL:0002433!7.76e-21!6;CL:0002431!7.76e-21!6;CL:0002432!7.76e-21!6;CL:0000738!5.28e-19!17;CL:0002087!5.28e-19!17;CL:0002320!1.15e-15!46;CL:0000134!1.15e-15!46;CL:0000219!7.51e-13!54;CL:0000063!6.54e-10!66;CL:0000553!4.82e-09!6;CL:0000556!4.82e-09!6;CL:0000034!1.07e-08!97|ontology_enrichment_celltype_v019_2=CL:0000791,2.71e-71,9;CL:0000789,2.71e-71,9;CL:0002420,2.71e-71,9;CL:0002419,2.71e-71,9;CL:0000790,2.71e-71,9;CL:0000838,1.07e-65,12;CL:0000624,1.72e-63,8;CL:0000542,1.28e-60,13;CL:0000051,1.28e-60,13;CL:0000084,2.74e-58,11;CL:0000827,2.74e-58,11;CL:0000893,6.51e-48,6;CL:0002489,6.51e-48,6;CL:0000898,6.51e-48,6;CL:0000809,6.51e-48,6;CL:0000810,6.51e-48,6;CL:0000895,6.51e-48,6;CL:0000808,6.51e-48,6;CL:0000894,6.51e-48,6;CL:0000806,6.51e-48,6;CL:0000807,6.51e-48,6;CL:0000805,6.51e-48,6;CL:0002425,6.51e-48,6;CL:0002436,6.51e-48,6;CL:0002427,6.51e-48,6;CL:0002428,6.51e-48,6;CL:0002429,6.51e-48,6;CL:0002433,6.51e-48,6;CL:0002431,6.51e-48,6;CL:0002432,6.51e-48,6;CL:0000738,2.82e-46,17;CL:0002087,2.82e-46,17;CL:0002031,6.60e-38,25;CL:0000988,1.64e-29,32;CL:0002032,1.64e-29,32;CL:0000037,1.64e-29,32;CL:0000837,1.64e-29,32;CL:0002320,2.32e-20,46;CL:0000134,2.32e-20,46;CL:0000219,2.98e-17,54;CL:0000723,6.08e-10,91;CL:0000048,6.08e-10,91;CL:0000815,1.73e-09,1;CL:0000792,1.73e-09,1;CL:0000625,2.52e-09,1;CL:0000034,2.81e-09,97;CL:0000945,4.39e-09,1;CL:0000236,4.39e-09,1;CL:0000826,4.39e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.53e-18!48;UBERON:0002370!4.14e-18!23;UBERON:0000974!4.14e-18!23;UBERON:0004807!4.14e-18!23;UBERON:0005058!4.14e-18!23;UBERON:0003351!4.14e-18!23;UBERON:0009113!4.14e-18!23;UBERON:0003295!4.14e-18!23;UBERON:0009722!4.14e-18!23;UBERON:0005562!4.14e-18!23;UBERON:0007690!4.14e-18!23;UBERON:0002390!1.71e-17!45;UBERON:0003061!1.71e-17!45;UBERON:0006562!2.94e-17!24;UBERON:0003408!2.94e-17!24;UBERON:0001557!2.94e-17!24;UBERON:0001042!2.94e-17!24;UBERON:0008814!2.94e-17!24;UBERON:0009145!2.94e-17!24;UBERON:0004177!2.55e-16!29;UBERON:0002384!1.15e-15!46;UBERON:0000072!4.41e-15!27;UBERON:0002405!2.05e-11!70;UBERON:0000063!4.17e-11!35;UBERON:0000065!3.82e-09!41;UBERON:0001004!7.14e-09!42;UBERON:0003081!2.46e-08!88;UBERON:0005057!3.48e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.32e-20,46;UBERON:0002370,1.81e-12,23;UBERON:0000974,1.81e-12,23;UBERON:0004807,1.81e-12,23;UBERON:0005058,1.81e-12,23;UBERON:0003351,1.81e-12,23;UBERON:0009113,1.81e-12,23;UBERON:0003295,1.81e-12,23;UBERON:0009722,1.81e-12,23;UBERON:0005562,1.81e-12,23;UBERON:0007690,1.81e-12,23;UBERON:0006562,6.09e-12,24;UBERON:0003408,6.09e-12,24;UBERON:0001557,6.09e-12,24;UBERON:0001042,6.09e-12,24;UBERON:0008814,6.09e-12,24;UBERON:0009145,6.09e-12,24;UBERON:0000072,1.35e-10,27;UBERON:0004177,7.50e-10,29;UBERON:0005057,7.50e-10,29;UBERON:0002390,2.17e-08,45;UBERON:0003061,2.17e-08,45;UBERON:0000077,4.00e-08,35;UBERON:0007811,6.83e-08,36;UBERON:0002193,7.71e-08,48;UBERON:0002405,7.71e-08,48;UBERON:0000065,6.73e-07,41;UBERON:0001004,9.98e-07,42|phase1_expression=0,0,0,0,0,0,0,5.93967287831251,4.92760527530834,12.8735489477096,1.02730780935303,1.27635454392538,9.0736386863539,6.6439505838438,0,0.404950534779652,0,1.73504190947031,0.548457734422955,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr17:52301956..52301965,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=319 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:52301956..52301965,- | |||
|id=chr17:52301956..52301965,- | |||
|ontology_enrichment_celltype=CL:0000791!1.72e-30!9;CL:0000789!1.72e-30!9;CL:0002420!1.72e-30!9;CL:0002419!1.72e-30!9;CL:0000790!1.72e-30!9;CL:0000838!1.04e-27!12;CL:0000624!2.86e-27!8;CL:0000542!1.96e-25!13;CL:0000051!1.96e-25!13;CL:0000084!1.17e-24!11;CL:0000827!1.17e-24!11;CL:0002031!2.03e-24!25;CL:0000988!5.61e-24!32;CL:0002032!5.61e-24!32;CL:0000037!5.61e-24!32;CL:0000566!5.61e-24!32;CL:0000837!5.61e-24!32;CL:0000893!7.76e-21!6;CL:0002489!7.76e-21!6;CL:0000898!7.76e-21!6;CL:0000809!7.76e-21!6;CL:0000810!7.76e-21!6;CL:0000895!7.76e-21!6;CL:0000808!7.76e-21!6;CL:0000894!7.76e-21!6;CL:0000806!7.76e-21!6;CL:0000807!7.76e-21!6;CL:0000805!7.76e-21!6;CL:0002425!7.76e-21!6;CL:0002436!7.76e-21!6;CL:0002427!7.76e-21!6;CL:0002428!7.76e-21!6;CL:0002429!7.76e-21!6;CL:0002433!7.76e-21!6;CL:0002431!7.76e-21!6;CL:0002432!7.76e-21!6;CL:0000738!5.28e-19!17;CL:0002087!5.28e-19!17;CL:0002320!1.15e-15!46;CL:0000134!1.15e-15!46;CL:0000219!7.51e-13!54;CL:0000063!6.54e-10!66;CL:0000553!4.82e-09!6;CL:0000556!4.82e-09!6;CL:0000034!1.07e-08!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.71e-71,9;CL:0000789,2.71e-71,9;CL:0002420,2.71e-71,9;CL:0002419,2.71e-71,9;CL:0000790,2.71e-71,9;CL:0000838,1.07e-65,12;CL:0000624,1.72e-63,8;CL:0000542,1.28e-60,13;CL:0000051,1.28e-60,13;CL:0000084,2.74e-58,11;CL:0000827,2.74e-58,11;CL:0000893,6.51e-48,6;CL:0002489,6.51e-48,6;CL:0000898,6.51e-48,6;CL:0000809,6.51e-48,6;CL:0000810,6.51e-48,6;CL:0000895,6.51e-48,6;CL:0000808,6.51e-48,6;CL:0000894,6.51e-48,6;CL:0000806,6.51e-48,6;CL:0000807,6.51e-48,6;CL:0000805,6.51e-48,6;CL:0002425,6.51e-48,6;CL:0002436,6.51e-48,6;CL:0002427,6.51e-48,6;CL:0002428,6.51e-48,6;CL:0002429,6.51e-48,6;CL:0002433,6.51e-48,6;CL:0002431,6.51e-48,6;CL:0002432,6.51e-48,6;CL:0000738,2.82e-46,17;CL:0002087,2.82e-46,17;CL:0002031,6.60e-38,25;CL:0000988,1.64e-29,32;CL:0002032,1.64e-29,32;CL:0000037,1.64e-29,32;CL:0000837,1.64e-29,32;CL:0002320,2.32e-20,46;CL:0000134,2.32e-20,46;CL:0000219,2.98e-17,54;CL:0000723,6.08e-10,91;CL:0000048,6.08e-10,91;CL:0000815,1.73e-09,1;CL:0000792,1.73e-09,1;CL:0000625,2.52e-09,1;CL:0000034,2.81e-09,97;CL:0000945,4.39e-09,1;CL:0000236,4.39e-09,1;CL:0000826,4.39e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.53e-18!48;UBERON:0002370!4.14e-18!23;UBERON:0000974!4.14e-18!23;UBERON:0004807!4.14e-18!23;UBERON:0005058!4.14e-18!23;UBERON:0003351!4.14e-18!23;UBERON:0009113!4.14e-18!23;UBERON:0003295!4.14e-18!23;UBERON:0009722!4.14e-18!23;UBERON:0005562!4.14e-18!23;UBERON:0007690!4.14e-18!23;UBERON:0002390!1.71e-17!45;UBERON:0003061!1.71e-17!45;UBERON:0006562!2.94e-17!24;UBERON:0003408!2.94e-17!24;UBERON:0001557!2.94e-17!24;UBERON:0001042!2.94e-17!24;UBERON:0008814!2.94e-17!24;UBERON:0009145!2.94e-17!24;UBERON:0004177!2.55e-16!29;UBERON:0002384!1.15e-15!46;UBERON:0000072!4.41e-15!27;UBERON:0002405!2.05e-11!70;UBERON:0000063!4.17e-11!35;UBERON:0000065!3.82e-09!41;UBERON:0001004!7.14e-09!42;UBERON:0003081!2.46e-08!88;UBERON:0005057!3.48e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.32e-20,46;UBERON:0002370,1.81e-12,23;UBERON:0000974,1.81e-12,23;UBERON:0004807,1.81e-12,23;UBERON:0005058,1.81e-12,23;UBERON:0003351,1.81e-12,23;UBERON:0009113,1.81e-12,23;UBERON:0003295,1.81e-12,23;UBERON:0009722,1.81e-12,23;UBERON:0005562,1.81e-12,23;UBERON:0007690,1.81e-12,23;UBERON:0006562,6.09e-12,24;UBERON:0003408,6.09e-12,24;UBERON:0001557,6.09e-12,24;UBERON:0001042,6.09e-12,24;UBERON:0008814,6.09e-12,24;UBERON:0009145,6.09e-12,24;UBERON:0000072,1.35e-10,27;UBERON:0004177,7.50e-10,29;UBERON:0005057,7.50e-10,29;UBERON:0002390,2.17e-08,45;UBERON:0003061,2.17e-08,45;UBERON:0000077,4.00e-08,35;UBERON:0007811,6.83e-08,36;UBERON:0002193,7.71e-08,48;UBERON:0002405,7.71e-08,48;UBERON:0000065,6.73e-07,41;UBERON:0001004,9.98e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,5.93967287831251,4.92760527530834,12.8735489477096,1.02730780935303,1.27635454392538,9.0736386863539,6.6439505838438,0,0.404950534779652,0,1.73504190947031,0.548457734422955,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr17:52301956..52301965,- | |||
}} |
Revision as of 14:54, 13 September 2013
Short description: | p@chr17:52301956..52301965, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:52301956..52301965, - |
Coexpression cluster: | MCL_coexpression_mm9:319 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.32e-20 | 46 |
thymus | 1.81e-12 | 23 |
neck | 1.81e-12 | 23 |
respiratory system epithelium | 1.81e-12 | 23 |
hemolymphoid system gland | 1.81e-12 | 23 |
pharyngeal epithelium | 1.81e-12 | 23 |
thymic region | 1.81e-12 | 23 |
pharyngeal gland | 1.81e-12 | 23 |
entire pharyngeal arch endoderm | 1.81e-12 | 23 |
thymus primordium | 1.81e-12 | 23 |
early pharyngeal endoderm | 1.81e-12 | 23 |
pharynx | 6.09e-12 | 24 |
gland of gut | 6.09e-12 | 24 |
upper respiratory tract | 6.09e-12 | 24 |
chordate pharynx | 6.09e-12 | 24 |
pharyngeal arch system | 6.09e-12 | 24 |
pharyngeal region of foregut | 6.09e-12 | 24 |
segment of respiratory tract | 1.35e-10 | 27 |
hemopoietic organ | 7.50e-10 | 29 |
immune organ | 7.50e-10 | 29 |
hematopoietic system | 2.17e-08 | 45 |
blood island | 2.17e-08 | 45 |
mixed endoderm/mesoderm-derived structure | 4.00e-08 | 35 |
craniocervical region | 6.83e-08 | 36 |
hemolymphoid system | 7.71e-08 | 48 |
immune system | 7.71e-08 | 48 |
respiratory tract | 6.73e-07 | 41 |
respiratory system | 9.98e-07 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.