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FFCP PHASE1:Mm9::chr18:38456462..38456473,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=56736|HGNC=|MCL_coexpression_id=491|UniProt=Q9JI90|association_with_transcript=3bp_to_ENSMUST00000171461,NM_001164621,uc008esh.2_5end|description=CAGE_peak_4_at_Rnf14_5end|id=chr18:38456462..38456473,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.75e-12,54;UBERON:0010314,2.41e-10,92;UBERON:0001049,6.10e-10,52;UBERON:0005068,6.10e-10,52;UBERON:0006241,6.10e-10,52;UBERON:0007135,6.10e-10,52;UBERON:0000955,2.45e-09,47;UBERON:0006238,2.45e-09,47;UBERON:0001017,5.81e-09,73;UBERON:0002346,1.40e-08,64;UBERON:0003075,1.40e-08,64;UBERON:0007284,1.40e-08,64;UBERON:0001016,1.55e-08,75;UBERON:0002616,1.74e-08,46;UBERON:0002950,4.96e-08,4;UBERON:0001891,4.96e-08,4;UBERON:0009616,4.96e-08,4;UBERON:0010286,4.96e-08,4;UBERON:0004121,6.33e-08,95;UBERON:0000924,6.33e-08,95;UBERON:0006601,6.33e-08,95;UBERON:0003076,1.51e-07,12;UBERON:0003057,1.51e-07,12;UBERON:0007023,2.49e-07,51;UBERON:0004733,6.00e-07,6;UBERON:0004732,6.00e-07,6;UBERON:0002028,6.00e-07,6;UBERON:0007277,6.00e-07,6;UBERON:0010371,9.30e-07,73|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0.171200729931206,0.437102012094987,0.666219523631325,0.809901069559304,0,1.10411757875383,1.23402990245165,0.42438965179803,0.425216450755349,1.39007331681239,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.816677425049476,2.09265815368454,0,0,1.17646297606203,1.36609096991689,1.45653105909346,0.125896817975577,0.202753862439029,0.183546752161682,1.56478268869608,0,0.219686182734472,0,0,0,0.838913030288682,1.45072428402269,0.336093799142464,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0,0,9.91042928994498,4.97980618532232,7.98753972932466,0.263772575460388,0.274462930807229,0,6.14202597803038,5.6276261003168,7.18151764551008,1.76777151284201,1.56608848879013,0.372798891650601,0.227178579999552,0.226714680320357,0,0.860423876981386,0,0.539703191637817,0,0,0.702222100658759,0.340860645156116,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,1.03575153458869,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0.452167921657868,0.352766121407114,0.753999547978053,0.494389935468748,0.722996784599558,2.65383165584962,0.323533699894818,0.883366073841574,0.969750506270444,0,3.22058876712702,2.51336048176146,0,0.11981512450592,0,0.508280908292259,6.74057877321702,2.28750301409313,0.251308704225729,3.12883776346098,1.02286182932132,6.2336413367868,2.59586020908412,0.509196819251581,0.995255764880744,0.758168275301024,1.26265113531884,0.260240885925407,0,0.180062129805349,0,0.340182495756639,0.384341160854549,0.468508622798644,1.55222022443409,0,0,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,1.28673953557358,0.852490498186778,1.03562886267751,0.234526059981096,0.36012412292203,0.23674473558521,0.590292695242212,0.308534225774757,0.697601834251224,0.268273401399619,1.28441876603886,1.15191894939436,1.64167464079095,1.94565142910054,2.48539978623065,2.63460138349261,2.14730270016595,0.420579897128254,0.205809224758569,0.660837565967596,0.528901133327089,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.38992817423824,0,0.648414149624083,0.199141273254367,0,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0.771494018793504,0.442655759869801,1.32849133181642,0.156998727841375,0.863780147452604,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.486405680325106,0.549122826376163,1.43768206527355,0,0.312037673114561,0.252578877947112,0.538192240565737,0.964887042726734,0.554259570499814,0.189491411770485,0.651859905768103,0.339490171550376,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,0.315270288212382,0.44292937929755,0,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0,3.53211297973142,4.10240903072711,0,1.76729649043061,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,2.89189184779626,0.141940085208269,0,0.162886959353576,0.494910368917606,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0.885905678642318,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,2.06271086496374,2.04263763452273,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.493647061806363,1.2178597964584,0.23467170806371,0.21183207086382,0.220528398054962,0.32977250588296,0.322928853391811,0.361877549568935,0.358117032009409,0.492422699235184,0.291480836629851,3.33765543618917,0.854354403989263,0.206386867963223,0.370389054739423,0.941842285023455,0.136694227721025,0.457556346413045,0.509935289981566,0.419854356970974,0.967399816630967,1.90934123603023,0.158167996790568,0.609958401380546,0.324016022465404,0.627264888043406,0,0.404593039154462,0.495920734352016,0.785267825952089,0.388844919875379,1.86401793926078,1.69107881605257,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0.352071715937262,0.13020438484395,0.629156066554265,3.62376181239009,1.72818003754719,0.632022241256357,0,0.205421914329655,0.129920822977795,0.358053391334963,0,0.480781798079875,0,0,0.228620419965,0.100826185136841,0.194915761479505,0.192423683280659,0.584384510907845,1.58711268530648,0,0.269141569828427,0.503653849092235,0.19318959403219,0,0.183151624267265,0,1.00314420807073,0,0.920650473014354,0.572895513439397,0.68741272937475,3.42541259885321,1.5107877947794,0.675022500231806,0.45032120322422,3.62513927187364,2.5888015587591,0.207574695168353,0.399024873401031,0.341467211508268,0,0.209613162627982,0.919217542250071,0.666740183404846,0.618105171716683,0,0.252697211763798,0.50695859978048,0.565879024158229,0.37456602987953,0.192075457214608,0.402048282689293,0,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.658765662907314,0.338458431566706,0.365855945745545,1.8414879800649,0.679020569229309,0,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.695603506861264|short_description=p4@Rnf14}}
|EntrezGene=56736
|HGNC=
|MCL_coexpression_id=491
|UniProt=Q9JI90
|association_with_transcript=3bp_to_ENSMUST00000171461,NM_001164621,uc008esh.2_5end
|description=CAGE_peak_4_at_Rnf14_5end
|id=chr18:38456462..38456473,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.75e-12,54;UBERON:0010314,2.41e-10,92;UBERON:0001049,6.10e-10,52;UBERON:0005068,6.10e-10,52;UBERON:0006241,6.10e-10,52;UBERON:0007135,6.10e-10,52;UBERON:0000955,2.45e-09,47;UBERON:0006238,2.45e-09,47;UBERON:0001017,5.81e-09,73;UBERON:0002346,1.40e-08,64;UBERON:0003075,1.40e-08,64;UBERON:0007284,1.40e-08,64;UBERON:0001016,1.55e-08,75;UBERON:0002616,1.74e-08,46;UBERON:0002950,4.96e-08,4;UBERON:0001891,4.96e-08,4;UBERON:0009616,4.96e-08,4;UBERON:0010286,4.96e-08,4;UBERON:0004121,6.33e-08,95;UBERON:0000924,6.33e-08,95;UBERON:0006601,6.33e-08,95;UBERON:0003076,1.51e-07,12;UBERON:0003057,1.51e-07,12;UBERON:0007023,2.49e-07,51;UBERON:0004733,6.00e-07,6;UBERON:0004732,6.00e-07,6;UBERON:0002028,6.00e-07,6;UBERON:0007277,6.00e-07,6;UBERON:0010371,9.30e-07,73
|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0.171200729931206,0.437102012094987,0.666219523631325,0.809901069559304,0,1.10411757875383,1.23402990245165,0.42438965179803,0.425216450755349,1.39007331681239,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.816677425049476,2.09265815368454,0,0,1.17646297606203,1.36609096991689,1.45653105909346,0.125896817975577,0.202753862439029,0.183546752161682,1.56478268869608,0,0.219686182734472,0,0,0,0.838913030288682,1.45072428402269,0.336093799142464,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.768436610643109,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0,0,9.91042928994498,4.97980618532232,7.98753972932466,0.263772575460388,0.274462930807229,0,6.14202597803038,5.6276261003168,7.18151764551008,1.76777151284201,1.56608848879013,0.372798891650601,0.227178579999552,0.226714680320357,0,0.860423876981386,0,0.539703191637817,0,0,0.702222100658759,0.340860645156116,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,1.03575153458869,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0.452167921657868,0.352766121407114,0.753999547978053,0.494389935468748,0.722996784599558,2.65383165584962,0.323533699894818,0.883366073841574,0.969750506270444,0,3.22058876712702,2.51336048176146,0,0.11981512450592,0,0.508280908292259,6.74057877321702,2.28750301409313,0.251308704225729,3.12883776346098,1.02286182932132,6.2336413367868,2.59586020908412,0.509196819251581,0.995255764880744,0.758168275301024,1.26265113531884,0.260240885925407,0,0.180062129805349,0,0.340182495756639,0.384341160854549,0.468508622798644,1.55222022443409,0,0,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,1.28673953557358,0.852490498186778,1.03562886267751,0.234526059981096,0.36012412292203,0.23674473558521,0.590292695242212,0.308534225774757,0.697601834251224,0.268273401399619,1.28441876603886,1.15191894939436,1.64167464079095,1.94565142910054,2.48539978623065,2.63460138349261,2.14730270016595,0.420579897128254,0.205809224758569,0.660837565967596,0.528901133327089,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.38992817423824,0,0.648414149624083,0.199141273254367,0,0.114248512609729,1.1270773567308,0.203651327845314,0.387904974335251,0.771494018793504,0.442655759869801,1.32849133181642,0.156998727841375,0.863780147452604,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.486405680325106,0.549122826376163,1.43768206527355,0,0.312037673114561,0.252578877947112,0.538192240565737,0.964887042726734,0.554259570499814,0.189491411770485,0.651859905768103,0.339490171550376,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,0.315270288212382,0.44292937929755,0,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0,3.53211297973142,4.10240903072711,0,1.76729649043061,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,2.89189184779626,0.141940085208269,0,0.162886959353576,0.494910368917606,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0.885905678642318,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,2.06271086496374,2.04263763452273,0.18006109403131,0.129358683782755,0,0.177340233642274,0.356737635204141,0.493647061806363,1.2178597964584,0.23467170806371,0.21183207086382,0.220528398054962,0.32977250588296,0.322928853391811,0.361877549568935,0.358117032009409,0.492422699235184,0.291480836629851,3.33765543618917,0.854354403989263,0.206386867963223,0.370389054739423,0.941842285023455,0.136694227721025,0.457556346413045,0.509935289981566,0.419854356970974,0.967399816630967,1.90934123603023,0.158167996790568,0.609958401380546,0.324016022465404,0.627264888043406,0,0.404593039154462,0.495920734352016,0.785267825952089,0.388844919875379,1.86401793926078,1.69107881605257,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0.352071715937262,0.13020438484395,0.629156066554265,3.62376181239009,1.72818003754719,0.632022241256357,0,0.205421914329655,0.129920822977795,0.358053391334963,0,0.480781798079875,0,0,0.228620419965,0.100826185136841,0.194915761479505,0.192423683280659,0.584384510907845,1.58711268530648,0,0.269141569828427,0.503653849092235,0.19318959403219,0,0.183151624267265,0,1.00314420807073,0,0.920650473014354,0.572895513439397,0.68741272937475,3.42541259885321,1.5107877947794,0.675022500231806,0.45032120322422,3.62513927187364,2.5888015587591,0.207574695168353,0.399024873401031,0.341467211508268,0,0.209613162627982,0.919217542250071,0.666740183404846,0.618105171716683,0,0.252697211763798,0.50695859978048,0.565879024158229,0.374566029879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|short_description=p4@Rnf14
}}

Revision as of 16:08, 13 September 2013

Short description:p4@Rnf14
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rnf14_5end
Coexpression cluster:MCL_coexpression_mm9:491
Association with transcript: 3bp_to_ENSMUST00000171461, NM_001164621, uc008esh.2_5end
EntrezGene:Rnf14
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Rnf14

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.75e-1254
structure with developmental contribution from neural crest2.41e-1092
neural tube6.10e-1052
neural rod6.10e-1052
future spinal cord6.10e-1052
neural keel6.10e-1052
brain2.45e-0947
future brain2.45e-0947
central nervous system5.81e-0973
neurectoderm1.40e-0864
neural plate1.40e-0864
presumptive neural plate1.40e-0864
nervous system1.55e-0875
regional part of brain1.74e-0846
regional part of midbrain4.96e-084
midbrain4.96e-084
presumptive midbrain4.96e-084
midbrain neural tube4.96e-084
ectoderm-derived structure6.33e-0895
ectoderm6.33e-0895
presumptive ectoderm6.33e-0895
posterior neural tube1.51e-0712
chordal neural plate1.51e-0712
adult organism2.49e-0751
segmental subdivision of hindbrain6.00e-076
segmental subdivision of nervous system6.00e-076
hindbrain6.00e-076
presumptive hindbrain6.00e-076
ecto-epithelium9.30e-0773







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