FFCP PHASE1:Mm9::chr18:46607342..46607383,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:46607342..46607383,-|id=chr18:46607342..46607383,-|ontology_enrichment_celltype=CL:0000049!7.63e-08!19;CL:0000988!5.84e-07!32;CL:0002032!5.84e-07!32;CL:0000037!5.84e-07!32;CL:0000566!5.84e-07!32;CL:0000837!5.84e-07!32|ontology_enrichment_celltype_v019_2=CL:0000049,5.79e-08,19;CL:0000355,5.18e-07,9|ontology_enrichment_disease=DOID:0060100!1.57e-11!3;DOID:4045!1.57e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,6.21e-20,3;DOID:4045,6.21e-20,3;DOID:0050686,2.88e-10,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.18e-07,9;UBERON:0002036,5.18e-07,9;UBERON:0002385,5.18e-07,9;UBERON:0000486,5.18e-07,9;UBERON:0007503,5.18e-07,9;UBERON:0001015,5.18e-07,9;UBERON:0002329,5.18e-07,9;UBERON:0003082,5.18e-07,9;UBERON:0003059,5.18e-07,9;UBERON:0007282,5.18e-07,9;UBERON:0004290,5.18e-07,9;UBERON:0009618,5.18e-07,9|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0.159544317990673,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,5.4693474116666,2.61761871986899,51.7643709467293,15.7100461540443,9.71020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,2.39630249011841,1.79970819298022,1.77898317902291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,3.73952545986482,2.37917468950219,2.9021994498929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:46607342..46607383,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:46607342..46607383,- | |||
|id=chr18:46607342..46607383,- | |||
|ontology_enrichment_celltype=CL:0000049!7.63e-08!19;CL:0000988!5.84e-07!32;CL:0002032!5.84e-07!32;CL:0000037!5.84e-07!32;CL:0000566!5.84e-07!32;CL:0000837!5.84e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,5.79e-08,19;CL:0000355,5.18e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.57e-11!3;DOID:4045!1.57e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.21e-20,3;DOID:4045,6.21e-20,3;DOID:0050686,2.88e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.18e-07,9;UBERON:0002036,5.18e-07,9;UBERON:0002385,5.18e-07,9;UBERON:0000486,5.18e-07,9;UBERON:0007503,5.18e-07,9;UBERON:0001015,5.18e-07,9;UBERON:0002329,5.18e-07,9;UBERON:0003082,5.18e-07,9;UBERON:0003059,5.18e-07,9;UBERON:0007282,5.18e-07,9;UBERON:0004290,5.18e-07,9;UBERON:0009618,5.18e-07,9 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0.159544317990673,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,5.4693474116666,2.61761871986899,51.7643709467293,15.7100461540443,9.71020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,2.39630249011841,1.79970819298022,1.77898317902291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,3.73952545986482,2.37917468950219,2.9021994498929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:46607342..46607383,- | |||
}} |
Revision as of 16:16, 13 September 2013
Short description: | p@chr18:46607342..46607383, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:46607342..46607383, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 5.79e-08 | 19 |
multi-potent skeletal muscle stem cell | 5.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.18e-07 | 9 |
striated muscle tissue | 5.18e-07 | 9 |
muscle tissue | 5.18e-07 | 9 |
multilaminar epithelium | 5.18e-07 | 9 |
epithelial vesicle | 5.18e-07 | 9 |
musculature | 5.18e-07 | 9 |
somite | 5.18e-07 | 9 |
myotome | 5.18e-07 | 9 |
presomitic mesoderm | 5.18e-07 | 9 |
presumptive segmental plate | 5.18e-07 | 9 |
dermomyotome | 5.18e-07 | 9 |
trunk paraxial mesoderm | 5.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.21e-20 | 3 |
muscle cancer | 6.21e-20 | 3 |
organ system cancer | 2.88e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.