FFCP PHASE1:Mm9::chr18:57292719..57292733,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70417|HGNC=|MCL_coexpression_id=1165|UniProt=Q6DIB5|association_with_transcript=-10bp_to_ENSMUST00000075770,NM_001001979,uc008eyz.2_5end|description=CAGE_peak_4_at_Megf10_5end|id=chr18:57292719..57292733,+|ontology_enrichment_celltype=CL:0000221!2.25e-20!44;CL:0000133!2.25e-20!44;CL:0002319!1.00e-19!43;CL:0000055!1.23e-16!50;CL:0000540!1.90e-15!33;CL:0000047!1.90e-15!33;CL:0000031!1.90e-15!33;CL:0000404!1.90e-15!33;CL:0000393!3.86e-13!39;CL:0000211!3.86e-13!39;CL:0000117!6.77e-09!23;CL:0000337!6.77e-09!23;CL:0000107!1.09e-07!9;CL:0002321!1.25e-07!70;CL:0000220!1.25e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,4.35e-25,44;CL:0000133,4.35e-25,44;CL:0002319,8.40e-24,43;CL:0000540,1.33e-16,33;CL:0000047,1.33e-16,33;CL:0000031,1.33e-16,33;CL:0000404,1.33e-16,33;CL:0000107,6.20e-16,9;CL:0000393,5.66e-15,39;CL:0000211,5.66e-15,39;CL:0002321,2.51e-14,70;CL:0000333,3.82e-08,10;CL:0000095,3.82e-08,10;CL:0000243,3.82e-08,10;CL:0000123,3.82e-08,10;CL:0000125,3.82e-08,10;CL:0000030,3.82e-08,10;CL:0000339,3.82e-08,10;CL:0000128,4.57e-07,6;CL:0000126,4.57e-07,6;CL:0000127,4.57e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.29e-36!102;UBERON:0000924!1.29e-36!102;UBERON:0006601!1.29e-36!102;UBERON:0000073!5.05e-35!75;UBERON:0001016!5.05e-35!75;UBERON:0001017!3.47e-33!73;UBERON:0005743!3.47e-33!73;UBERON:0002346!2.59e-26!71;UBERON:0003075!2.59e-26!71;UBERON:0007284!2.59e-26!71;UBERON:0000033!1.76e-22!63;UBERON:0000955!7.47e-20!50;UBERON:0006238!7.47e-20!50;UBERON:0002616!4.19e-19!49;UBERON:0001049!4.39e-19!52;UBERON:0005068!4.39e-19!52;UBERON:0006241!4.39e-19!52;UBERON:0007135!4.39e-19!52;UBERON:0003056!4.88e-17!49;UBERON:0002020!2.16e-14!34;UBERON:0003080!3.12e-14!40;UBERON:0002780!1.49e-13!39;UBERON:0001890!1.49e-13!39;UBERON:0006240!1.49e-13!39;UBERON:0002791!2.67e-13!29;UBERON:0003528!2.67e-13!29;UBERON:0001893!2.67e-13!29;UBERON:0007811!1.35e-10!86;UBERON:0000956!6.56e-10!21;UBERON:0001869!6.56e-10!21;UBERON:0000203!6.56e-10!21;UBERON:0000153!1.56e-09!94;UBERON:0000010!2.98e-09!11;UBERON:0002619!4.72e-08!17;UBERON:0002410!1.09e-07!9;UBERON:0000025!2.92e-07!114;UBERON:0004111!8.82e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.54e-40,75;UBERON:0001017,1.46e-36,73;UBERON:0004121,4.78e-34,95;UBERON:0000924,4.78e-34,95;UBERON:0006601,4.78e-34,95;UBERON:0000010,1.35e-19,11;UBERON:0002346,7.26e-18,64;UBERON:0003075,7.26e-18,64;UBERON:0007284,7.26e-18,64;UBERON:0000073,2.02e-17,54;UBERON:0010371,3.72e-17,73;UBERON:0000955,5.35e-16,47;UBERON:0006238,5.35e-16,47;UBERON:0002410,6.20e-16,9;UBERON:0001049,2.99e-15,52;UBERON:0005068,2.99e-15,52;UBERON:0006241,2.99e-15,52;UBERON:0007135,2.99e-15,52;UBERON:0002616,8.78e-15,46;UBERON:0010314,4.92e-14,92;UBERON:0011216,5.33e-11,194;UBERON:0003528,8.05e-10,29;UBERON:0002791,8.05e-10,29;UBERON:0001893,8.05e-10,29;UBERON:0003080,1.29e-09,40;UBERON:0002020,5.06e-09,34;UBERON:0003056,5.84e-09,49;UBERON:0002780,1.25e-08,39;UBERON:0001890,1.25e-08,39;UBERON:0006240,1.25e-08,39;UBERON:0004733,3.22e-08,6;UBERON:0004732,3.22e-08,6;UBERON:0002028,3.22e-08,6;UBERON:0007277,3.22e-08,6;UBERON:0002950,1.44e-07,4;UBERON:0001891,1.44e-07,4;UBERON:0009616,1.44e-07,4;UBERON:0010286,1.44e-07,4;UBERON:0000956,1.60e-07,21;UBERON:0001869,1.60e-07,21;UBERON:0000203,1.60e-07,21;UBERON:0003076,4.94e-07,12;UBERON:0003057,4.94e-07,12;UBERON:0010313,6.61e-07,3;UBERON:0002342,6.61e-07,3;UBERON:0002005,6.61e-07,3;UBERON:0005428,6.61e-07,3;UBERON:0005062,6.61e-07,3|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05235218932625,1.5378032791413,3.88859798148567,1.25987779462826,2.87505128729943,0,0,0,3.8588915405392,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,1.24427534770173,0.945041568321835,0.841299845405528,0.856952953211411,0.220868540951614,0.61245399607477,0.383381884072945,0,5.50579404996943,2.68143409978894,2.76491759861238,0.791317726381163,0.274462930807229,0.52091337055676,3.35019598801657,2.25105044012672,2.75036845998258,1.47314292736834,0.284743361598206,0.559198337475902,6.36100023998746,4.23200736597999,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.519572009205738,0.35333957451034,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,0.913396434936424,0.922461989024234,1.05505848386836,0.705532242814229,0,0,0,0,0.323533699894818,0.883366073841574,0.969750506270444,0,4.68449275218475,3.35114730901528,0,0,0,0,3.59497534571574,2.74500361691176,0.628271760564322,1.56441888173049,1.02286182932132,3.1168206683934,1.62241263067758,0,0.248813941220186,0,1.05220927943237,0.390361328888111,0.459804208866946,0.540186389416048,0.452114453507145,0.612328492361951,0.768682321709099,0.468508622798644,1.55222022443409,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.1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| ||
|EntrezGene=70417 | |||
|HGNC= | |||
|MCL_coexpression_id=1165 | |||
|UniProt=Q6DIB5 | |||
|association_with_transcript=-10bp_to_ENSMUST00000075770,NM_001001979,uc008eyz.2_5end | |||
|description=CAGE_peak_4_at_Megf10_5end | |||
|id=chr18:57292719..57292733,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.25e-20!44;CL:0000133!2.25e-20!44;CL:0002319!1.00e-19!43;CL:0000055!1.23e-16!50;CL:0000540!1.90e-15!33;CL:0000047!1.90e-15!33;CL:0000031!1.90e-15!33;CL:0000404!1.90e-15!33;CL:0000393!3.86e-13!39;CL:0000211!3.86e-13!39;CL:0000117!6.77e-09!23;CL:0000337!6.77e-09!23;CL:0000107!1.09e-07!9;CL:0002321!1.25e-07!70;CL:0000220!1.25e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.35e-25,44;CL:0000133,4.35e-25,44;CL:0002319,8.40e-24,43;CL:0000540,1.33e-16,33;CL:0000047,1.33e-16,33;CL:0000031,1.33e-16,33;CL:0000404,1.33e-16,33;CL:0000107,6.20e-16,9;CL:0000393,5.66e-15,39;CL:0000211,5.66e-15,39;CL:0002321,2.51e-14,70;CL:0000333,3.82e-08,10;CL:0000095,3.82e-08,10;CL:0000243,3.82e-08,10;CL:0000123,3.82e-08,10;CL:0000125,3.82e-08,10;CL:0000030,3.82e-08,10;CL:0000339,3.82e-08,10;CL:0000128,4.57e-07,6;CL:0000126,4.57e-07,6;CL:0000127,4.57e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.29e-36!102;UBERON:0000924!1.29e-36!102;UBERON:0006601!1.29e-36!102;UBERON:0000073!5.05e-35!75;UBERON:0001016!5.05e-35!75;UBERON:0001017!3.47e-33!73;UBERON:0005743!3.47e-33!73;UBERON:0002346!2.59e-26!71;UBERON:0003075!2.59e-26!71;UBERON:0007284!2.59e-26!71;UBERON:0000033!1.76e-22!63;UBERON:0000955!7.47e-20!50;UBERON:0006238!7.47e-20!50;UBERON:0002616!4.19e-19!49;UBERON:0001049!4.39e-19!52;UBERON:0005068!4.39e-19!52;UBERON:0006241!4.39e-19!52;UBERON:0007135!4.39e-19!52;UBERON:0003056!4.88e-17!49;UBERON:0002020!2.16e-14!34;UBERON:0003080!3.12e-14!40;UBERON:0002780!1.49e-13!39;UBERON:0001890!1.49e-13!39;UBERON:0006240!1.49e-13!39;UBERON:0002791!2.67e-13!29;UBERON:0003528!2.67e-13!29;UBERON:0001893!2.67e-13!29;UBERON:0007811!1.35e-10!86;UBERON:0000956!6.56e-10!21;UBERON:0001869!6.56e-10!21;UBERON:0000203!6.56e-10!21;UBERON:0000153!1.56e-09!94;UBERON:0000010!2.98e-09!11;UBERON:0002619!4.72e-08!17;UBERON:0002410!1.09e-07!9;UBERON:0000025!2.92e-07!114;UBERON:0004111!8.82e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.54e-40,75;UBERON:0001017,1.46e-36,73;UBERON:0004121,4.78e-34,95;UBERON:0000924,4.78e-34,95;UBERON:0006601,4.78e-34,95;UBERON:0000010,1.35e-19,11;UBERON:0002346,7.26e-18,64;UBERON:0003075,7.26e-18,64;UBERON:0007284,7.26e-18,64;UBERON:0000073,2.02e-17,54;UBERON:0010371,3.72e-17,73;UBERON:0000955,5.35e-16,47;UBERON:0006238,5.35e-16,47;UBERON:0002410,6.20e-16,9;UBERON:0001049,2.99e-15,52;UBERON:0005068,2.99e-15,52;UBERON:0006241,2.99e-15,52;UBERON:0007135,2.99e-15,52;UBERON:0002616,8.78e-15,46;UBERON:0010314,4.92e-14,92;UBERON:0011216,5.33e-11,194;UBERON:0003528,8.05e-10,29;UBERON:0002791,8.05e-10,29;UBERON:0001893,8.05e-10,29;UBERON:0003080,1.29e-09,40;UBERON:0002020,5.06e-09,34;UBERON:0003056,5.84e-09,49;UBERON:0002780,1.25e-08,39;UBERON:0001890,1.25e-08,39;UBERON:0006240,1.25e-08,39;UBERON:0004733,3.22e-08,6;UBERON:0004732,3.22e-08,6;UBERON:0002028,3.22e-08,6;UBERON:0007277,3.22e-08,6;UBERON:0002950,1.44e-07,4;UBERON:0001891,1.44e-07,4;UBERON:0009616,1.44e-07,4;UBERON:0010286,1.44e-07,4;UBERON:0000956,1.60e-07,21;UBERON:0001869,1.60e-07,21;UBERON:0000203,1.60e-07,21;UBERON:0003076,4.94e-07,12;UBERON:0003057,4.94e-07,12;UBERON:0010313,6.61e-07,3;UBERON:0002342,6.61e-07,3;UBERON:0002005,6.61e-07,3;UBERON:0005428,6.61e-07,3;UBERON:0005062,6.61e-07,3 | |||
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|short_description=p4@Megf10 | |||
}} |
Revision as of 16:23, 13 September 2013
Short description: | p4@Megf10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Megf10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1165 |
Association with transcript: | -10bp_to_ENSMUST00000075770, NM_001001979, uc008eyz.2_5end |
EntrezGene: | Megf10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.35e-25 | 44 |
neurectodermal cell | 4.35e-25 | 44 |
neural cell | 8.40e-24 | 43 |
neuron | 1.33e-16 | 33 |
neuronal stem cell | 1.33e-16 | 33 |
neuroblast | 1.33e-16 | 33 |
electrically signaling cell | 1.33e-16 | 33 |
autonomic neuron | 6.20e-16 | 9 |
electrically responsive cell | 5.66e-15 | 39 |
electrically active cell | 5.66e-15 | 39 |
embryonic cell | 2.51e-14 | 70 |
migratory neural crest cell | 3.82e-08 | 10 |
neuron associated cell | 3.82e-08 | 10 |
glial cell (sensu Vertebrata) | 3.82e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.82e-08 | 10 |
glial cell | 3.82e-08 | 10 |
glioblast | 3.82e-08 | 10 |
glioblast (sensu Vertebrata) | 3.82e-08 | 10 |
oligodendrocyte | 4.57e-07 | 6 |
macroglial cell | 4.57e-07 | 6 |
astrocyte | 4.57e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.