FFCP PHASE1:Hg19::chr5:7850965..7850988,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4552|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7473|TSSclassifier=N|UniProt=|association_with_transcript=-310bp_to_ENST00000507837_5end|description=CAGE_peak_4_at_MTRR_5end|id=chr5:7850965..7850988,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;3.23e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!2.74e-26!86;UBERON:0007284!2.74e-26!86;UBERON:0005743!5.06e-25!86;UBERON:0001049!2.38e-24!57;UBERON:0005068!2.38e-24!57;UBERON:0006241!2.38e-24!57;UBERON:0007135!2.38e-24!57;UBERON:0000073!4.52e-24!94;UBERON:0001016!4.52e-24!94;UBERON:0002346!4.98e-24!90;UBERON:0007023!6.83e-23!115;UBERON:0001017!4.84e-22!82;UBERON:0002616!1.58e-21!59;UBERON:0003056!4.41e-21!61;UBERON:0002780!1.15e-19!41;UBERON:0001890!1.15e-19!41;UBERON:0006240!1.15e-19!41;UBERON:0000955!2.33e-19!69;UBERON:0006238!2.33e-19!69;UBERON:0003080!7.15e-19!42;UBERON:0000033!1.76e-16!123;UBERON:0000153!2.26e-16!129;UBERON:0007811!2.26e-16!129;UBERON:0002020!9.17e-16!34;UBERON:0003528!9.17e-16!34;UBERON:0001893!1.84e-15!34;UBERON:0000119!3.12e-15!312;UBERON:0002791!6.21e-15!33;UBERON:0000483!7.75e-15!309;UBERON:0004121!2.09e-14!169;UBERON:0001869!3.22e-14!32;UBERON:0000481!1.15e-13!347;UBERON:0000924!1.83e-13!173;UBERON:0006601!1.83e-13!173;UBERON:0000475!1.22e-12!365;UBERON:0000025!9.65e-12!194;UBERON:0000477!2.71e-11!286;UBERON:0000956!6.21e-11!25;UBERON:0000203!6.21e-11!25;UBERON:0002619!1.96e-10!22;UBERON:0004111!3.03e-10!241;UBERON:0000062!1.46e-09!511;UBERON:0001950!5.21e-09!20;UBERON:0000922!4.58e-08!612;UBERON:0002368!4.95e-07!35;UBERON:0002050!6.02e-07!605;UBERON:0005423!6.02e-07!605;UBERON:0000468!8.84e-07!659|ontology_enrichment_uberon_v019=UBERON:0001896;7.01e-12;3!UBERON:0005290;7.01e-12;3!UBERON:0002298;1.91e-10;6!UBERON:0000073;2.87e-09;53!UBERON:0002616;2.87e-09;53!UBERON:0002780;7.42e-08;41!UBERON:0001890;7.42e-08;41!UBERON:0000349;2.72e-07;5!UBERON:0003528;3.04e-07;34!UBERON:0002020;3.04e-07;34!UBERON:0002791;4.44e-07;32!UBERON:0001869;4.44e-07;32!UBERON:0004732;4.60e-07;13!UBERON:0000125;8.47e-07;9!UBERON:0002308;8.47e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.84e-12,3;UBERON:0005290,6.84e-12,3;UBERON:0010096,6.84e-12,3;UBERON:0000073,8.26e-12,53;UBERON:0002616,8.26e-12,53;UBERON:0003075,1.82e-11,82;UBERON:0007284,1.82e-11,82;UBERON:0001049,5.21e-11,56;UBERON:0005068,5.21e-11,56;UBERON:0006241,5.21e-11,56;UBERON:0007135,5.21e-11,56;UBERON:0002346,9.80e-11,86;UBERON:0002298,1.83e-10,6;UBERON:0007023,2.70e-10,114;UBERON:0001017,6.13e-10,81;UBERON:0003056,7.21e-10,61;UBERON:0001016,9.59e-10,89;UBERON:0000955,1.36e-09,68;UBERON:0006238,1.36e-09,68;UBERON:0003528,1.43e-08,34;UBERON:0002020,1.43e-08,34;UBERON:0002780,3.24e-08,41;UBERON:0001890,3.24e-08,41;UBERON:0003080,3.24e-08,41;UBERON:0006240,3.24e-08,41;UBERON:0010371,3.73e-08,104;UBERON:0010314,3.90e-08,132;UBERON:0000349,2.40e-07,5;UBERON:0002791,2.55e-07,32;UBERON:0001869,2.55e-07,32;UBERON:0004732,4.19e-07,13;UBERON:0000125,7.59e-07,9;UBERON:0002308,7.59e-07,9;UBERON:0001893,8.17e-07,34;UBERON:0002420,9.43e-07,9;UBERON:0007245,9.43e-07,9;UBERON:0010009,9.43e-07,9;UBERON:0010011,9.43e-07,9;UBERON:0000454,9.43e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0.547497700291537,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.895037932904712,0,0,0,0.795285947051099,0,0.378139268656271,0.221729397462564,0.43917392846563,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.491337269247072,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0.751190294532984,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0,0,0.487894824518382,0,0.116193942869518,0.621966330092223,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,1.26755034821831,1.96565443335525,1.77236972004421,0,0.122988438543114,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.579652024875384,0.587043471179108,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,1.47798971368783,0.352193736052904,0,0.144119953416961,0,0,0,1.17217447210047,0,0.616964956219941,0.600686115687835,1.71495859578347,0,0.87192013766656,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0.532844358032199,0.14297799365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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4552 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7473 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-310bp_to_ENST00000507837_5end | |||
|description=CAGE_peak_4_at_MTRR_5end | |||
|id=chr5:7850965..7850988,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.23e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.74e-26!86;UBERON:0007284!2.74e-26!86;UBERON:0005743!5.06e-25!86;UBERON:0001049!2.38e-24!57;UBERON:0005068!2.38e-24!57;UBERON:0006241!2.38e-24!57;UBERON:0007135!2.38e-24!57;UBERON:0000073!4.52e-24!94;UBERON:0001016!4.52e-24!94;UBERON:0002346!4.98e-24!90;UBERON:0007023!6.83e-23!115;UBERON:0001017!4.84e-22!82;UBERON:0002616!1.58e-21!59;UBERON:0003056!4.41e-21!61;UBERON:0002780!1.15e-19!41;UBERON:0001890!1.15e-19!41;UBERON:0006240!1.15e-19!41;UBERON:0000955!2.33e-19!69;UBERON:0006238!2.33e-19!69;UBERON:0003080!7.15e-19!42;UBERON:0000033!1.76e-16!123;UBERON:0000153!2.26e-16!129;UBERON:0007811!2.26e-16!129;UBERON:0002020!9.17e-16!34;UBERON:0003528!9.17e-16!34;UBERON:0001893!1.84e-15!34;UBERON:0000119!3.12e-15!312;UBERON:0002791!6.21e-15!33;UBERON:0000483!7.75e-15!309;UBERON:0004121!2.09e-14!169;UBERON:0001869!3.22e-14!32;UBERON:0000481!1.15e-13!347;UBERON:0000924!1.83e-13!173;UBERON:0006601!1.83e-13!173;UBERON:0000475!1.22e-12!365;UBERON:0000025!9.65e-12!194;UBERON:0000477!2.71e-11!286;UBERON:0000956!6.21e-11!25;UBERON:0000203!6.21e-11!25;UBERON:0002619!1.96e-10!22;UBERON:0004111!3.03e-10!241;UBERON:0000062!1.46e-09!511;UBERON:0001950!5.21e-09!20;UBERON:0000922!4.58e-08!612;UBERON:0002368!4.95e-07!35;UBERON:0002050!6.02e-07!605;UBERON:0005423!6.02e-07!605;UBERON:0000468!8.84e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;7.01e-12;3!UBERON:0005290;7.01e-12;3!UBERON:0002298;1.91e-10;6!UBERON:0000073;2.87e-09;53!UBERON:0002616;2.87e-09;53!UBERON:0002780;7.42e-08;41!UBERON:0001890;7.42e-08;41!UBERON:0000349;2.72e-07;5!UBERON:0003528;3.04e-07;34!UBERON:0002020;3.04e-07;34!UBERON:0002791;4.44e-07;32!UBERON:0001869;4.44e-07;32!UBERON:0004732;4.60e-07;13!UBERON:0000125;8.47e-07;9!UBERON:0002308;8.47e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.84e-12,3;UBERON:0005290,6.84e-12,3;UBERON:0010096,6.84e-12,3;UBERON:0000073,8.26e-12,53;UBERON:0002616,8.26e-12,53;UBERON:0003075,1.82e-11,82;UBERON:0007284,1.82e-11,82;UBERON:0001049,5.21e-11,56;UBERON:0005068,5.21e-11,56;UBERON:0006241,5.21e-11,56;UBERON:0007135,5.21e-11,56;UBERON:0002346,9.80e-11,86;UBERON:0002298,1.83e-10,6;UBERON:0007023,2.70e-10,114;UBERON:0001017,6.13e-10,81;UBERON:0003056,7.21e-10,61;UBERON:0001016,9.59e-10,89;UBERON:0000955,1.36e-09,68;UBERON:0006238,1.36e-09,68;UBERON:0003528,1.43e-08,34;UBERON:0002020,1.43e-08,34;UBERON:0002780,3.24e-08,41;UBERON:0001890,3.24e-08,41;UBERON:0003080,3.24e-08,41;UBERON:0006240,3.24e-08,41;UBERON:0010371,3.73e-08,104;UBERON:0010314,3.90e-08,132;UBERON:0000349,2.40e-07,5;UBERON:0002791,2.55e-07,32;UBERON:0001869,2.55e-07,32;UBERON:0004732,4.19e-07,13;UBERON:0000125,7.59e-07,9;UBERON:0002308,7.59e-07,9;UBERON:0001893,8.17e-07,34;UBERON:0002420,9.43e-07,9;UBERON:0007245,9.43e-07,9;UBERON:0010009,9.43e-07,9;UBERON:0010011,9.43e-07,9;UBERON:0000454,9.43e-07,9 | |||
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| |||
|short_description=p4@MTRR | |||
}} |
Revision as of 16:34, 13 September 2013
Short description: | p4@MTRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MTRR_5end |
Coexpression cluster: | NA |
Association with transcript: | -310bp_to_ENST00000507837_5end |
EntrezGene: | MTRR |
HGNC: | 7473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.