FFCP PHASE1:Mm9::chr19:25580272..25580305,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=50796|HGNC=|MCL_coexpression_id=77|UniProt=|association_with_transcript=75bp_to_ENSMUST00000160814_5end|description=CAGE_peak_3_at_Dmrt1_5end|id=chr19:25580272..25580305,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!1.05e-45!14;UBERON:0003135!1.53e-42!15;UBERON:0000991!3.38e-41!18;UBERON:0005564!3.38e-41!18;UBERON:0003101!9.04e-40!16;UBERON:0000079!9.04e-40!16;UBERON:0004176!2.52e-37!17;UBERON:0009196!2.52e-37!17;UBERON:0009117!2.52e-37!17;UBERON:0003133!3.35e-35!24;UBERON:0005156!2.50e-32!26;UBERON:0000990!2.50e-32!26;UBERON:0002323!5.42e-19!37;UBERON:0004458!5.42e-19!37;UBERON:0003886!1.94e-18!38;UBERON:0002553!6.54e-18!39;UBERON:0000464!1.41e-11!57;UBERON:0000466!9.63e-08!79|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.23e-58,14;UBERON:0003135,5.08e-54,15;UBERON:0000991,3.37e-53,18;UBERON:0005564,3.37e-53,18;UBERON:0003101,1.35e-50,16;UBERON:0000079,1.35e-50,16;UBERON:0004176,1.42e-47,17;UBERON:0009196,1.42e-47,17;UBERON:0009117,1.42e-47,17;UBERON:0003133,1.09e-39,24;UBERON:0005156,1.44e-36,26;UBERON:0000990,1.44e-36,26;UBERON:0002323,2.05e-25,37;UBERON:0004458,2.05e-25,37;UBERON:0003886,1.02e-24,38;UBERON:0002553,4.63e-24,39;UBERON:0000926,5.20e-07,120;UBERON:0004120,5.20e-07,120;UBERON:0006603,5.20e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.823120949949934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4012446510522,3.43888055901151,3.64008679005615,2.91676782516071,1.6790777052105,4.05494701177868,5.8678619322877,23.9576068112868,47.7110017136984,15.2197996120384,9.50499020650956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Dmrt1}} | ||
|EntrezGene=50796 | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|UniProt= | |||
|association_with_transcript=75bp_to_ENSMUST00000160814_5end | |||
|description=CAGE_peak_3_at_Dmrt1_5end | |||
|id=chr19:25580272..25580305,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.05e-45!14;UBERON:0003135!1.53e-42!15;UBERON:0000991!3.38e-41!18;UBERON:0005564!3.38e-41!18;UBERON:0003101!9.04e-40!16;UBERON:0000079!9.04e-40!16;UBERON:0004176!2.52e-37!17;UBERON:0009196!2.52e-37!17;UBERON:0009117!2.52e-37!17;UBERON:0003133!3.35e-35!24;UBERON:0005156!2.50e-32!26;UBERON:0000990!2.50e-32!26;UBERON:0002323!5.42e-19!37;UBERON:0004458!5.42e-19!37;UBERON:0003886!1.94e-18!38;UBERON:0002553!6.54e-18!39;UBERON:0000464!1.41e-11!57;UBERON:0000466!9.63e-08!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.23e-58,14;UBERON:0003135,5.08e-54,15;UBERON:0000991,3.37e-53,18;UBERON:0005564,3.37e-53,18;UBERON:0003101,1.35e-50,16;UBERON:0000079,1.35e-50,16;UBERON:0004176,1.42e-47,17;UBERON:0009196,1.42e-47,17;UBERON:0009117,1.42e-47,17;UBERON:0003133,1.09e-39,24;UBERON:0005156,1.44e-36,26;UBERON:0000990,1.44e-36,26;UBERON:0002323,2.05e-25,37;UBERON:0004458,2.05e-25,37;UBERON:0003886,1.02e-24,38;UBERON:0002553,4.63e-24,39;UBERON:0000926,5.20e-07,120;UBERON:0004120,5.20e-07,120;UBERON:0006603,5.20e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.823120949949934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4012446510522,3.43888055901151,3.64008679005615,2.91676782516071,1.6790777052105,4.05494701177868,5.8678619322877,23.9576068112868,47.7110017136984,15.2197996120384,9.50499020650956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Dmrt1 | |||
}} |
Revision as of 17:16, 13 September 2013
Short description: | p3@Dmrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dmrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | 75bp_to_ENSMUST00000160814_5end |
EntrezGene: | Dmrt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.23e-58 | 14 |
male reproductive organ | 5.08e-54 | 15 |
gonad | 3.37e-53 | 18 |
gonad primordium | 3.37e-53 | 18 |
male organism | 1.35e-50 | 16 |
male reproductive system | 1.35e-50 | 16 |
external genitalia | 1.42e-47 | 17 |
indifferent external genitalia | 1.42e-47 | 17 |
indifferent gonad | 1.42e-47 | 17 |
reproductive organ | 1.09e-39 | 24 |
reproductive structure | 1.44e-36 | 26 |
reproductive system | 1.44e-36 | 26 |
body cavity | 2.05e-25 | 37 |
body cavity or lining | 2.05e-25 | 37 |
body cavity precursor | 1.02e-24 | 38 |
anatomical cavity | 4.63e-24 | 39 |
mesoderm | 5.20e-07 | 120 |
mesoderm-derived structure | 5.20e-07 | 120 |
presumptive mesoderm | 5.20e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.