FFCP PHASE1:Mm9::chr19:28085586..28085622,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19726|HGNC=|UniProt=P48381|association_with_transcript=7bp_to_ENSMUST00000174850_5end|description=CAGE_peak_3_at_Rfx3_5end|id=chr19:28085586..28085622,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.98e-20!94;UBERON:0007811!4.31e-17!86;UBERON:0003056!1.44e-16!49;UBERON:0000033!7.47e-16!63;UBERON:0001017!4.75e-14!73;UBERON:0005743!4.75e-14!73;UBERON:0002346!5.58e-14!71;UBERON:0003075!5.58e-14!71;UBERON:0007284!5.58e-14!71;UBERON:0003080!5.39e-13!40;UBERON:0000073!5.74e-13!75;UBERON:0001016!5.74e-13!75;UBERON:0000955!1.09e-12!50;UBERON:0006238!1.09e-12!50;UBERON:0002780!1.46e-12!39;UBERON:0001890!1.46e-12!39;UBERON:0006240!1.46e-12!39;UBERON:0001049!2.87e-12!52;UBERON:0005068!2.87e-12!52;UBERON:0006241!2.87e-12!52;UBERON:0007135!2.87e-12!52;UBERON:0002616!4.18e-12!49;UBERON:0004121!1.60e-11!102;UBERON:0000924!1.60e-11!102;UBERON:0006601!1.60e-11!102;UBERON:0002020!1.14e-09!34;UBERON:0002791!1.80e-09!29;UBERON:0003528!1.80e-09!29;UBERON:0001893!1.80e-09!29;UBERON:0000956!5.21e-08!21;UBERON:0001869!5.21e-08!21;UBERON:0000203!5.21e-08!21;UBERON:0002021!6.60e-08!10;UBERON:0000411!6.60e-08!10;UBERON:0001950!6.60e-08!10;UBERON:0002619!2.33e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.98e-16,64;UBERON:0003075,1.98e-16,64;UBERON:0007284,1.98e-16,64;UBERON:0003056,2.04e-16,49;UBERON:0001017,4.64e-14,73;UBERON:0010371,4.34e-13,73;UBERON:0001016,7.33e-13,75;UBERON:0003080,8.07e-13,40;UBERON:0004121,1.14e-12,95;UBERON:0000924,1.14e-12,95;UBERON:0006601,1.14e-12,95;UBERON:0000073,1.82e-12,54;UBERON:0000955,2.11e-12,47;UBERON:0006238,2.11e-12,47;UBERON:0002780,2.20e-12,39;UBERON:0001890,2.20e-12,39;UBERON:0006240,2.20e-12,39;UBERON:0001049,2.98e-12,52;UBERON:0005068,2.98e-12,52;UBERON:0006241,2.98e-12,52;UBERON:0007135,2.98e-12,52;UBERON:0002616,8.21e-12,46;UBERON:0002020,1.74e-09,34;UBERON:0003528,2.85e-09,29;UBERON:0002791,2.85e-09,29;UBERON:0001893,2.85e-09,29;UBERON:0010314,8.64e-09,92;UBERON:0002021,5.69e-08,10;UBERON:0000411,5.69e-08,10;UBERON:0001950,5.69e-08,10;UBERON:0000956,8.84e-08,21;UBERON:0001869,8.84e-08,21;UBERON:0000203,8.84e-08,21;UBERON:0002619,4.15e-07,17;UBERON:0000153,5.59e-07,43|phase1_expression=4.64431656603902,0,0,1.51232105653415,0.500895729946347,0.839396359559449,2.80335168714631,3.48632973292256,1.68946466582,1.87251621057595,0.513653904676515,0.398860794976682,9.0736386863539,11.1023911072127,0.333109761815663,1.21485160433896,0.699561878128147,5.20512572841092,6.17014951225825,0.84877930359606,7.65389611359628,2.08510997521859,2.35079810225042,0.639969691173627,0.22940928106717,0,0.430761996159075,0.861884930743556,0.380046838912748,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,2.59966457776147,1.49611180822643,3.06254034393554,0,2.3440060335714,2.61761871986899,2.35292595212406,1.36609096991689,2.42755176515577,0.503587271902309,0.304130793658544,0.183546752161682,0,1.96222640742402,0.878744730937887,0.972149495371417,1.1198913730029,1.43752564364972,2.85230430298152,2.90144856804538,10.7550015725588,0.257259436035947,0.573066879877513,0.515672092277442,7.48570905180512,5.81890077199236,2.53532561402472,0,0,0,0,0,1.19840044207362,1.53687322128622,7.77672092313582,4.59020190327748,4.41682418837902,2.57085885963423,1.76694832761291,8.69684674426174,6.90087391331302,5.51531271966013,3.30347642998166,6.38436690425939,6.29786786350598,6.3305418110493,7.86793734980723,7.29278718779464,2.23346399201105,5.6276261003168,5.04234217663473,10.9012576625257,10.3931326983345,5.96478226640962,0.908714319998209,1.058001841495,2.6087803983151,0.860423876981386,0,0,0,0.896053774194671,1.96622188184453,0.170430322578058,0,0,4.92951969218382,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,1.59857431606684,13.4647699496529,3.11728492036132,3.99016251562112,2.13125834818499,0.922461989024234,1.50722640552623,2.58695155698551,1.13099932196708,0.494389935468748,0.578397427679647,0.884610551949874,0.808834249737046,3.5334642953663,2.90925151881133,5.59175283654366,8.49064311333487,8.16842156572475,1.02182822083437,4.67278985573089,5.39912457894067,2.28726408731516,9.58660092190865,18.3000241127451,14.3245961408665,14.7750672163435,12.0186264945255,8.10373373782284,8.27430441645564,3.05518091550949,2.11491850037158,1.26361379216837,2.73574412652416,10.539755879979,8.04657365517155,11.7040384373477,10.0972227949929,10.2054748726992,12.4270308676304,12.5560310910037,15.2634988736019,9.05385570317937,16.8304411349359,9.32540958068929,5.2606975782618,11.1218899690239,6.268538997399,5.55611768301447,4.17971960318836,2.80885274925294,1.54408744268829,3.6941254921427,4.97101854085205,3.51789089971644,1.98068267607116,5.91861838963026,3.93528463494808,3.5481435964097,3.48800917125612,2.14618721119695,1.86824547787471,0.822799249567402,1.80584210487005,0.810688095458557,1.46199987425332,1.09775057645525,0.805238512562231,20.187835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| ||
|EntrezGene=19726 | |||
|HGNC= | |||
|UniProt=P48381 | |||
|association_with_transcript=7bp_to_ENSMUST00000174850_5end | |||
|description=CAGE_peak_3_at_Rfx3_5end | |||
|id=chr19:28085586..28085622,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.98e-20!94;UBERON:0007811!4.31e-17!86;UBERON:0003056!1.44e-16!49;UBERON:0000033!7.47e-16!63;UBERON:0001017!4.75e-14!73;UBERON:0005743!4.75e-14!73;UBERON:0002346!5.58e-14!71;UBERON:0003075!5.58e-14!71;UBERON:0007284!5.58e-14!71;UBERON:0003080!5.39e-13!40;UBERON:0000073!5.74e-13!75;UBERON:0001016!5.74e-13!75;UBERON:0000955!1.09e-12!50;UBERON:0006238!1.09e-12!50;UBERON:0002780!1.46e-12!39;UBERON:0001890!1.46e-12!39;UBERON:0006240!1.46e-12!39;UBERON:0001049!2.87e-12!52;UBERON:0005068!2.87e-12!52;UBERON:0006241!2.87e-12!52;UBERON:0007135!2.87e-12!52;UBERON:0002616!4.18e-12!49;UBERON:0004121!1.60e-11!102;UBERON:0000924!1.60e-11!102;UBERON:0006601!1.60e-11!102;UBERON:0002020!1.14e-09!34;UBERON:0002791!1.80e-09!29;UBERON:0003528!1.80e-09!29;UBERON:0001893!1.80e-09!29;UBERON:0000956!5.21e-08!21;UBERON:0001869!5.21e-08!21;UBERON:0000203!5.21e-08!21;UBERON:0002021!6.60e-08!10;UBERON:0000411!6.60e-08!10;UBERON:0001950!6.60e-08!10;UBERON:0002619!2.33e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.98e-16,64;UBERON:0003075,1.98e-16,64;UBERON:0007284,1.98e-16,64;UBERON:0003056,2.04e-16,49;UBERON:0001017,4.64e-14,73;UBERON:0010371,4.34e-13,73;UBERON:0001016,7.33e-13,75;UBERON:0003080,8.07e-13,40;UBERON:0004121,1.14e-12,95;UBERON:0000924,1.14e-12,95;UBERON:0006601,1.14e-12,95;UBERON:0000073,1.82e-12,54;UBERON:0000955,2.11e-12,47;UBERON:0006238,2.11e-12,47;UBERON:0002780,2.20e-12,39;UBERON:0001890,2.20e-12,39;UBERON:0006240,2.20e-12,39;UBERON:0001049,2.98e-12,52;UBERON:0005068,2.98e-12,52;UBERON:0006241,2.98e-12,52;UBERON:0007135,2.98e-12,52;UBERON:0002616,8.21e-12,46;UBERON:0002020,1.74e-09,34;UBERON:0003528,2.85e-09,29;UBERON:0002791,2.85e-09,29;UBERON:0001893,2.85e-09,29;UBERON:0010314,8.64e-09,92;UBERON:0002021,5.69e-08,10;UBERON:0000411,5.69e-08,10;UBERON:0001950,5.69e-08,10;UBERON:0000956,8.84e-08,21;UBERON:0001869,8.84e-08,21;UBERON:0000203,8.84e-08,21;UBERON:0002619,4.15e-07,17;UBERON:0000153,5.59e-07,43 | |||
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| |||
|short_description=p3@Rfx3 | |||
}} | |||
Revision as of 17:18, 13 September 2013
| Short description: | p3@Rfx3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Rfx3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 7bp_to_ENSMUST00000174850_5end |
| EntrezGene: | Rfx3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
