FFCP PHASE1:Hg19::chr6:122720837..122720857,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3298|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5225|TSSclassifier=S|UniProt=Q03933,Q9BS48|association_with_transcript=141bp_to_ENST00000452194,NM_001135564,NM_001243094,NM_004506,uc003pyt.3,uc003pyu.2,uc003pyv.2_5end|description=CAGE_peak_2_at_HSF2_5end|id=chr6:122720837..122720857,+|ontology_enrichment_celltype=CL:0000791!1.51e-07!18;CL:0000789!1.51e-07!18;CL:0002420!1.51e-07!18;CL:0002419!1.51e-07!18;CL:0000790!1.51e-07!18;CL:0000084!3.96e-07!25;CL:0000827!3.96e-07!25;CL:0000542!4.22e-07!53;CL:0000051!4.22e-07!53;CL:0000838!4.63e-07!52|ontology_enrichment_celltype_v019=CL:0000084;1.66e-10;25!CL:0000791;2.36e-10;18!CL:0000789;2.36e-10;18!CL:0002419;2.36e-10;18!CL:0000542;5.44e-08;53!CL:0000625;6.91e-07;11|ontology_enrichment_celltype_v019_2=CL:0000838,7.48e-13,52;CL:0000542,1.86e-12,53;CL:0000051,1.86e-12,53;CL:0000084,2.21e-11,25;CL:0000827,2.21e-11,25;CL:0000791,2.36e-11,18;CL:0000789,2.36e-11,18;CL:0002420,2.36e-11,18;CL:0002419,2.36e-11,18;CL:0000790,2.36e-11,18;CL:0000625,8.79e-08,11|ontology_enrichment_development_v019=CL:0000790;2.36e-10;18!CL:0000051;5.44e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.726713517082227,0,0.563817616383885,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0.626909442956176,0.85870796139317,0.958120975510189,0.502170558379211,0.382067028739756,0.410502947249729,0.393553906568396,1.57345710739562,1.15148819429164,0.928896739896456,0,0,0,2.09161441566814,1.42169232487422,1.76160263600908,0.553995408531877,0.802177789880567,0.651032612147555,0.447830948479849,0.647787332037959,0,0.145398238779565,0.377875943688809,0,0,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.752969358170419,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0,0.605399502633369,0.368277635987565,0,0,0.212604299965044,0,0.22465726229299,0.300353785683013,0.16072558669708,0.855038231223746,0.79566670879636,0.730656615058536,0,0,0,1.28019066769952,0,0,0,0.954053754535364,2.84606484554724,1.17447437874188,1.14681968437569,3.96513985737078,0.560508562981536,1.05353633910031,3.73748563216283,2.35806457649499,1.23360899399706,0.501559486172034,1.30368906653436,2.36723902867367,0,1.00269411196656,0.883817722424512,0.664601683750863,0.541607727530031,0.128091319725675,0.260118695119756,0.493313713811028,0.276350017785848,0.289803085735052,2.07601188426885,4.0131124213457,0,0.679856056185397,1.91610246800961,2.74901956386104,0.759059076058509,1.91139248594458,1.30216690771284,0.950452044448374,1.6563263098555,0.895906278080929,2.49861453104692,1.89421801635213,0,1.81446068902259,1.87208137048455,3.91025890483557,0,0,0.383587685530591,0,2.00535164254356,0.724232594804119,1.5905718941022,0,0.567208902984407,0.665188192387692,0.43917392846563,1.0478326039817,0.364295288292542,0,0.649094787309367,0,0,0.715471872916026,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0.35576626268671,1.00416183829401,0.402829317109147,1.52054421143703,0,0.367663080345869,0,0.892997282840798,0.673588117878509,0.225222960966644,1.53316637465883,0,0,1.31780417436063,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0.74000264525148,0.933633106199299,0.404132016209064,0.653847612453835,0.151357427644931,1.72852777344,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0,0.206651562351531,0,0,0,0,0.336672227908132,0,0,0,0.30648779579902,0.45071417671979,0.226864366320042,0.89694817844431,0,0,0.300091096084402,0.412210116953756,0.772921620136887,0.18611685633159,0.843881661206331,0.487185025805993,0.757301322732344,0.552299391853796,0.323292113637624,0.355009592516614,0.806016785821122,0.339121184620975,0,0.272746120590835,0,0.487894824518382,0.132529768321485,0.580969714347592,0.518305275076852,0,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.828147600278907,0.674338760312407,0.723033089650446,0.661763836394364,0.217879444092406,0.237270619111097,0.808987848960987,0.588664395376038,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0,0,2.20731549707325,0.737930631258681,0.514703430895577,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,0,0.463721619900307,0.234817388471643,0.577465791044295,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0.148631162288728,0,0.335964256397719,0.425325291727159,0.447792613514241,0,0,0,0.352193736052904,0.621984346622316,1.00883967391873,0.50496973370552,0.444485260045183,0,1.17217447210047,0,0.514137463516618,1.50171528921959,0.857479297891735,0.112131084345361,0,0.95339771567235,0.775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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3298 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5225 | |||
|TSSclassifier=S | |||
|UniProt=Q03933,Q9BS48 | |||
|association_with_transcript=141bp_to_ENST00000452194,NM_001135564,NM_001243094,NM_004506,uc003pyt.3,uc003pyu.2,uc003pyv.2_5end | |||
|description=CAGE_peak_2_at_HSF2_5end | |||
|id=chr6:122720837..122720857,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.51e-07!18;CL:0000789!1.51e-07!18;CL:0002420!1.51e-07!18;CL:0002419!1.51e-07!18;CL:0000790!1.51e-07!18;CL:0000084!3.96e-07!25;CL:0000827!3.96e-07!25;CL:0000542!4.22e-07!53;CL:0000051!4.22e-07!53;CL:0000838!4.63e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.66e-10;25!CL:0000791;2.36e-10;18!CL:0000789;2.36e-10;18!CL:0002419;2.36e-10;18!CL:0000542;5.44e-08;53!CL:0000625;6.91e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.48e-13,52;CL:0000542,1.86e-12,53;CL:0000051,1.86e-12,53;CL:0000084,2.21e-11,25;CL:0000827,2.21e-11,25;CL:0000791,2.36e-11,18;CL:0000789,2.36e-11,18;CL:0002420,2.36e-11,18;CL:0002419,2.36e-11,18;CL:0000790,2.36e-11,18;CL:0000625,8.79e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.36e-10;18!CL:0000051;5.44e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@HSF2 | |||
}} |
Revision as of 17:41, 13 September 2013
Short description: | p2@HSF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HSF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 141bp_to_ENST00000452194, NM_001135564, NM_001243094, NM_004506, uc003pyt.3, uc003pyu.2, uc003pyv.2_5end |
EntrezGene: | HSF2 |
HGNC: | 5225 |
UniProt: | Q03933Q9BS48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.48e-13 | 52 |
lymphocyte | 1.86e-12 | 53 |
common lymphoid progenitor | 1.86e-12 | 53 |
T cell | 2.21e-11 | 25 |
pro-T cell | 2.21e-11 | 25 |
mature alpha-beta T cell | 2.36e-11 | 18 |
alpha-beta T cell | 2.36e-11 | 18 |
immature T cell | 2.36e-11 | 18 |
mature T cell | 2.36e-11 | 18 |
immature alpha-beta T cell | 2.36e-11 | 18 |
CD8-positive, alpha-beta T cell | 8.79e-08 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.