FFCP PHASE1:Mm9::chr19:5474911..5474938,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=58859|HGNC=|MCL_coexpression_id=2269|UniProt=E9PYW6|association_with_transcript=-129bp_to_ENSMUST00000169943_5end|description=CAGE_peak_3_at_Efemp2_5end|id=chr19:5474911..5474938,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,6.53e-11,8;CL:0000333,1.88e-10,10;CL:0000095,1.88e-10,10;CL:0000243,1.88e-10,10;CL:0000123,1.88e-10,10;CL:0000125,1.88e-10,10;CL:0000030,1.88e-10,10;CL:0000339,1.88e-10,10;CL:0000222,1.27e-09,7;CL:0000680,7.11e-09,6;CL:0000187,7.11e-09,6;CL:0000056,7.11e-09,6;CL:0000128,2.02e-08,6;CL:0000126,2.02e-08,6;CL:0000127,2.02e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.31e-07,11;UBERON:0003077,4.31e-07,11;UBERON:0007285,4.31e-07,11|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.330713617802,11.5569701590247,13.5824596599644,15.6478268869608,1.96222640742402,12.3024262331304,11.665793944457,3.3596741190087,4.31257693094915,0,0,0,9.51859913333004,6.01720223871389,8.76642556871652,0.202316460859598,0,0.633831403506179,6.43804610931351,7.11435836888911,10.3488467487361,4.94433181283487,7.104801149461,9.28760342607055,13.4476406862544,0.414758449233911,0.135005938331691,0.210324961351382,0,0.441737081903227,0.122490799214954,0.191690942036473,0,1.10115880999389,0.383062014255563,0.768032666281217,0.527545150920775,0.182975287204819,0,1.3959149950069,0.56276261003168,0.30559649555362,0.294628585473668,0.569486723196412,0.559198337475902,0.37863096666592,2.49386148352392,1.44932244350839,0,0,0,0,0,0.983110940922263,20.792499354523,20.2633083590238,21.9070536196411,1.40843419776681,6.41632387071589,5.09610479413291,14.2213340630666,0.649473123033642,0.760079596425296,0.505524445014783,0.22836775943812,0.258937883647172,4.89859058913922,1.21439728736295,1.52232739156071,0.922461989024234,1.65794904607885,0.940709657085638,1.63366568728578,0.494389935468748,1.01219549843938,0,1.13236794963186,0.441683036920787,0.969750506270444,0,0.878342391034642,2.51336048176146,0.255457055208591,0,0,0,0.599162557619291,0,0.376963056338593,0.521472960576829,0.255715457330331,0.41557608911912,0,1.52759045775474,1.36847667671102,0.252722758433675,0.841767423545896,1.43132487258974,0.689706313300419,0.360124259610698,0.452114453507145,0.544291993210623,0.384341160854549,0.562210347358373,0.517406741478031,1.07783996466421,0.945530400839096,1.23165786914764,1.7535658594206,0.834141747676794,0.348252166522167,1.4404749548556,0.59710280045548,0,0,0,0,0.703578179943289,0.180062061461015,0,0,0.617068451549513,0,0.268273401399619,0.467061369468678,0.329119699826961,0.656669856316381,0.405344047729279,0.730999937126662,0.439100230582101,0.134206418760372,0.630869845692382,0.308713837137853,0,0.264450566663544,1.2797295032114,1.16118335930219,0.38660238396628,0.605050573870028,0,0,0.949058123089023,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.913988100877831,0,0.814605311381257,1.16371492300575,0.911765658574141,0.885311519739602,0.442830443938806,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0,0,0.575392274901621,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.739012760666419,0.568474235311454,0.814824882210129,0.339490171550376,0.469380496577004,1.17254380209271,0.714130922658041,0.780534591431195,0.788175720530955,1.55025282754142,0.956728611944923,0.491589944147214,1.03610989119537,0.578596234326046,0,0,0.983528546038072,0.827810238914197,0.963303539926752,0.937693492737625,3.77050374366353,0.504941854408746,0.631016438832513,0.390438744296638,0.646270193198397,2.86762557543062,1.33679204449436,0.566153061577665,1.21443210502468,2.63030272120181,0.790575555893047,0,1.98716119291576,1.06839362200353,0.81443479676788,1.48473110675282,0,0.728341908464944,0.302323556964751,0,0,0.614870295887855,0.258428293168221,0.727067458955011,0,0.632073515871632,0,2.06271086496374,0.340439605753788,0.900305470156551,1.81102157295856,0.643011105094777,0.886701168211368,1.24858172321449,0.329098041204242,0.304464949114599,2.3467170806371,2.33015277950202,0.220528398054962,0.49465875882444,0.807322133479528,1.02531972377865,0.596861720015682,0.656563598980245,0.291480836629851,0.370850604021019,0,0.82554747185289,0,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,0.949007980743406,0.203319467126849,0.324016022465404,1.25452977608681,0.436725127492355,0.404593039154462,0.578574190077352,1.30877970992015,0.90730481304255,0,0,1.19613236835183,0.66183396182839,0.583353565032143,0.516639293910924,1.18269287843545,0.469428954583016,0.39061315453185,0.838874755405687,0.241584120826006,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0.3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| ||
|EntrezGene=58859 | |||
|HGNC= | |||
|MCL_coexpression_id=2269 | |||
|UniProt=E9PYW6 | |||
|association_with_transcript=-129bp_to_ENSMUST00000169943_5end | |||
|description=CAGE_peak_3_at_Efemp2_5end | |||
|id=chr19:5474911..5474938,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.53e-11,8;CL:0000333,1.88e-10,10;CL:0000095,1.88e-10,10;CL:0000243,1.88e-10,10;CL:0000123,1.88e-10,10;CL:0000125,1.88e-10,10;CL:0000030,1.88e-10,10;CL:0000339,1.88e-10,10;CL:0000222,1.27e-09,7;CL:0000680,7.11e-09,6;CL:0000187,7.11e-09,6;CL:0000056,7.11e-09,6;CL:0000128,2.02e-08,6;CL:0000126,2.02e-08,6;CL:0000127,2.02e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.31e-07,11;UBERON:0003077,4.31e-07,11;UBERON:0007285,4.31e-07,11 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.330713617802,11.5569701590247,13.5824596599644,15.6478268869608,1.96222640742402,12.3024262331304,11.665793944457,3.3596741190087,4.31257693094915,0,0,0,9.51859913333004,6.01720223871389,8.76642556871652,0.202316460859598,0,0.633831403506179,6.43804610931351,7.11435836888911,10.3488467487361,4.94433181283487,7.104801149461,9.28760342607055,13.4476406862544,0.414758449233911,0.135005938331691,0.210324961351382,0,0.441737081903227,0.122490799214954,0.191690942036473,0,1.10115880999389,0.383062014255563,0.768032666281217,0.527545150920775,0.182975287204819,0,1.3959149950069,0.56276261003168,0.30559649555362,0.294628585473668,0.569486723196412,0.559198337475902,0.37863096666592,2.49386148352392,1.44932244350839,0,0,0,0,0,0.983110940922263,20.792499354523,20.2633083590238,21.9070536196411,1.40843419776681,6.41632387071589,5.09610479413291,14.2213340630666,0.649473123033642,0.760079596425296,0.505524445014783,0.22836775943812,0.258937883647172,4.89859058913922,1.21439728736295,1.52232739156071,0.922461989024234,1.65794904607885,0.940709657085638,1.63366568728578,0.494389935468748,1.01219549843938,0,1.13236794963186,0.441683036920787,0.969750506270444,0,0.878342391034642,2.51336048176146,0.255457055208591,0,0,0,0.599162557619291,0,0.376963056338593,0.521472960576829,0.255715457330331,0.41557608911912,0,1.52759045775474,1.36847667671102,0.252722758433675,0.841767423545896,1.43132487258974,0.689706313300419,0.360124259610698,0.452114453507145,0.544291993210623,0.384341160854549,0.562210347358373,0.517406741478031,1.07783996466421,0.945530400839096,1.23165786914764,1.7535658594206,0.834141747676794,0.348252166522167,1.4404749548556,0.59710280045548,0,0,0,0,0.703578179943289,0.180062061461015,0,0,0.617068451549513,0,0.268273401399619,0.467061369468678,0.329119699826961,0.656669856316381,0.405344047729279,0.730999937126662,0.439100230582101,0.134206418760372,0.630869845692382,0.308713837137853,0,0.264450566663544,1.2797295032114,1.16118335930219,0.38660238396628,0.605050573870028,0,0,0.949058123089023,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.913988100877831,0,0.814605311381257,1.16371492300575,0.911765658574141,0.885311519739602,0.442830443938806,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0,0,0.575392274901621,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.739012760666419,0.568474235311454,0.814824882210129,0.339490171550376,0.469380496577004,1.17254380209271,0.714130922658041,0.780534591431195,0.788175720530955,1.55025282754142,0.956728611944923,0.491589944147214,1.03610989119537,0.578596234326046,0,0,0.983528546038072,0.827810238914197,0.963303539926752,0.937693492737625,3.77050374366353,0.504941854408746,0.631016438832513,0.390438744296638,0.646270193198397,2.86762557543062,1.33679204449436,0.566153061577665,1.21443210502468,2.63030272120181,0.790575555893047,0,1.98716119291576,1.06839362200353,0.81443479676788,1.48473110675282,0,0.728341908464944,0.302323556964751,0,0,0.614870295887855,0.258428293168221,0.727067458955011,0,0.632073515871632,0,2.06271086496374,0.340439605753788,0.900305470156551,1.81102157295856,0.643011105094777,0.886701168211368,1.24858172321449,0.329098041204242,0.304464949114599,2.3467170806371,2.33015277950202,0.220528398054962,0.49465875882444,0.807322133479528,1.02531972377865,0.596861720015682,0.656563598980245,0.291480836629851,0.370850604021019,0,0.82554747185289,0,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,0.949007980743406,0.203319467126849,0.324016022465404,1.25452977608681,0.436725127492355,0.404593039154462,0.578574190077352,1.30877970992015,0.90730481304255,0,0,1.19613236835183,0.66183396182839,0.583353565032143,0.516639293910924,1.18269287843545,0.469428954583016,0.39061315453185,0.838874755405687,0.241584120826006,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0.304827226619999,0,0,0.192423683280659,0,0.906921534460845,0,0.0897138566094757,0.503653849092235,1.15913756419314,3.19060208267009,2.38097111547445,0.643105137237198,1.00314420807073,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0.453142408984205,1.03552062350364,0.103787347584177,0.399024873401031,1.19513524027894,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.768301828858431,0.804096565378586,0,0.231768651889711,0.578727661391115,0.412085900803307,0.735994600671987,0.685738504770831,0.887379030796687,1.1921809497366,0.290692833264657,0.752875043322645,0.592302255241736,0.548783918618318,0.526139422875686,0.407412341537585,0,0.711810108745045,0.394017929502254,0.409231043169689,0.619747364743864,0.192906610981141,0.749431733813838,1.63752125911786,0.214871054048298,1.3390183244819,1.98532277207564,0.927471342481686 | |||
|short_description=p3@Efemp2 | |||
}} |
Revision as of 18:05, 13 September 2013
Short description: | p3@Efemp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Efemp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2269 |
Association with transcript: | -129bp_to_ENSMUST00000169943_5end |
EntrezGene: | Efemp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.53e-11 | 8 |
migratory neural crest cell | 1.88e-10 | 10 |
neuron associated cell | 1.88e-10 | 10 |
glial cell (sensu Vertebrata) | 1.88e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 1.88e-10 | 10 |
glial cell | 1.88e-10 | 10 |
glioblast | 1.88e-10 | 10 |
glioblast (sensu Vertebrata) | 1.88e-10 | 10 |
mesodermal cell | 1.27e-09 | 7 |
muscle precursor cell | 7.11e-09 | 6 |
muscle cell | 7.11e-09 | 6 |
myoblast | 7.11e-09 | 6 |
oligodendrocyte | 2.02e-08 | 6 |
macroglial cell | 2.02e-08 | 6 |
astrocyte | 2.02e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 4.31e-07 | 11 |
paraxial mesoderm | 4.31e-07 | 11 |
presumptive paraxial mesoderm | 4.31e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.