FFCP PHASE1:Mm9::chr1:156731300..156731309,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=235|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:156731300..156731309,-|id=chr1:156731300..156731309,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.02e-27!50;UBERON:0006238!3.02e-27!50;UBERON:0000956!3.15e-26!21;UBERON:0001869!3.15e-26!21;UBERON:0000203!3.15e-26!21;UBERON:0002616!5.13e-25!49;UBERON:0002791!1.87e-24!29;UBERON:0003528!1.87e-24!29;UBERON:0001893!1.87e-24!29;UBERON:0001049!7.62e-21!52;UBERON:0005068!7.62e-21!52;UBERON:0006241!7.62e-21!52;UBERON:0007135!7.62e-21!52;UBERON:0000033!7.98e-21!63;UBERON:0002020!1.98e-20!34;UBERON:0002780!4.88e-20!39;UBERON:0001890!4.88e-20!39;UBERON:0006240!4.88e-20!39;UBERON:0003080!1.85e-19!40;UBERON:0002619!2.35e-19!17;UBERON:0001017!2.45e-19!73;UBERON:0005743!2.45e-19!73;UBERON:0000073!1.03e-18!75;UBERON:0001016!1.03e-18!75;UBERON:0002021!3.26e-17!10;UBERON:0000411!3.26e-17!10;UBERON:0001950!3.26e-17!10;UBERON:0003056!2.61e-15!49;UBERON:0002346!2.75e-14!71;UBERON:0003075!2.75e-14!71;UBERON:0007284!2.75e-14!71;UBERON:0007811!3.34e-14!86;UBERON:0004121!1.11e-12!102;UBERON:0000924!1.11e-12!102;UBERON:0006601!1.11e-12!102;UBERON:0000153!1.18e-12!94;UBERON:0000025!1.64e-08!114;UBERON:0000064!3.94e-08!99;UBERON:0004111!1.07e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.45e-15,21;UBERON:0001869,3.45e-15,21;UBERON:0000203,3.45e-15,21;UBERON:0001851,1.16e-13,1;UBERON:0005889,1.16e-13,1;UBERON:0002619,3.03e-12,17;UBERON:0002021,7.70e-12,10;UBERON:0000411,7.70e-12,10;UBERON:0001950,7.70e-12,10;UBERON:0003528,4.29e-11,29;UBERON:0002791,4.29e-11,29;UBERON:0001893,4.29e-11,29;UBERON:0002616,5.17e-10,46;UBERON:0000955,8.37e-10,47;UBERON:0006238,8.37e-10,47;UBERON:0002020,1.66e-09,34;UBERON:0001049,7.09e-09,52;UBERON:0005068,7.09e-09,52;UBERON:0006241,7.09e-09,52;UBERON:0007135,7.09e-09,52;UBERON:0000073,1.49e-08,54;UBERON:0002780,2.55e-08,39;UBERON:0001890,2.55e-08,39;UBERON:0006240,2.55e-08,39;UBERON:0003080,4.06e-08,40;UBERON:0002346,3.12e-07,64;UBERON:0003075,3.12e-07,64;UBERON:0007284,3.12e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,2.72280718857492,0,0,0,0,0,0,0,1.91206752211504,1.53429274398198,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859265911718438,2.74033007908257,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:156731300..156731309,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=235 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:156731300..156731309,- | |||
|id=chr1:156731300..156731309,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.02e-27!50;UBERON:0006238!3.02e-27!50;UBERON:0000956!3.15e-26!21;UBERON:0001869!3.15e-26!21;UBERON:0000203!3.15e-26!21;UBERON:0002616!5.13e-25!49;UBERON:0002791!1.87e-24!29;UBERON:0003528!1.87e-24!29;UBERON:0001893!1.87e-24!29;UBERON:0001049!7.62e-21!52;UBERON:0005068!7.62e-21!52;UBERON:0006241!7.62e-21!52;UBERON:0007135!7.62e-21!52;UBERON:0000033!7.98e-21!63;UBERON:0002020!1.98e-20!34;UBERON:0002780!4.88e-20!39;UBERON:0001890!4.88e-20!39;UBERON:0006240!4.88e-20!39;UBERON:0003080!1.85e-19!40;UBERON:0002619!2.35e-19!17;UBERON:0001017!2.45e-19!73;UBERON:0005743!2.45e-19!73;UBERON:0000073!1.03e-18!75;UBERON:0001016!1.03e-18!75;UBERON:0002021!3.26e-17!10;UBERON:0000411!3.26e-17!10;UBERON:0001950!3.26e-17!10;UBERON:0003056!2.61e-15!49;UBERON:0002346!2.75e-14!71;UBERON:0003075!2.75e-14!71;UBERON:0007284!2.75e-14!71;UBERON:0007811!3.34e-14!86;UBERON:0004121!1.11e-12!102;UBERON:0000924!1.11e-12!102;UBERON:0006601!1.11e-12!102;UBERON:0000153!1.18e-12!94;UBERON:0000025!1.64e-08!114;UBERON:0000064!3.94e-08!99;UBERON:0004111!1.07e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.45e-15,21;UBERON:0001869,3.45e-15,21;UBERON:0000203,3.45e-15,21;UBERON:0001851,1.16e-13,1;UBERON:0005889,1.16e-13,1;UBERON:0002619,3.03e-12,17;UBERON:0002021,7.70e-12,10;UBERON:0000411,7.70e-12,10;UBERON:0001950,7.70e-12,10;UBERON:0003528,4.29e-11,29;UBERON:0002791,4.29e-11,29;UBERON:0001893,4.29e-11,29;UBERON:0002616,5.17e-10,46;UBERON:0000955,8.37e-10,47;UBERON:0006238,8.37e-10,47;UBERON:0002020,1.66e-09,34;UBERON:0001049,7.09e-09,52;UBERON:0005068,7.09e-09,52;UBERON:0006241,7.09e-09,52;UBERON:0007135,7.09e-09,52;UBERON:0000073,1.49e-08,54;UBERON:0002780,2.55e-08,39;UBERON:0001890,2.55e-08,39;UBERON:0006240,2.55e-08,39;UBERON:0003080,4.06e-08,40;UBERON:0002346,3.12e-07,64;UBERON:0003075,3.12e-07,64;UBERON:0007284,3.12e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,2.72280718857492,0,0,0,0,0,0,0,1.91206752211504,1.53429274398198,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859265911718438,2.74033007908257,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:156731300..156731309,- | |||
}} |
Revision as of 19:18, 13 September 2013
Short description: | p@chr1:156731300..156731309, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:156731300..156731309, - |
Coexpression cluster: | MCL_coexpression_mm9:235 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 3.45e-15 | 21 |
cerebral hemisphere | 3.45e-15 | 21 |
pallium | 3.45e-15 | 21 |
cortex | 1.16e-13 | 1 |
zygote cortex | 1.16e-13 | 1 |
regional part of cerebral cortex | 3.03e-12 | 17 |
occipital lobe | 7.70e-12 | 10 |
visual cortex | 7.70e-12 | 10 |
neocortex | 7.70e-12 | 10 |
brain grey matter | 4.29e-11 | 29 |
regional part of telencephalon | 4.29e-11 | 29 |
telencephalon | 4.29e-11 | 29 |
regional part of brain | 5.17e-10 | 46 |
brain | 8.37e-10 | 47 |
future brain | 8.37e-10 | 47 |
gray matter | 1.66e-09 | 34 |
neural tube | 7.09e-09 | 52 |
neural rod | 7.09e-09 | 52 |
future spinal cord | 7.09e-09 | 52 |
neural keel | 7.09e-09 | 52 |
regional part of nervous system | 1.49e-08 | 54 |
regional part of forebrain | 2.55e-08 | 39 |
forebrain | 2.55e-08 | 39 |
future forebrain | 2.55e-08 | 39 |
anterior neural tube | 4.06e-08 | 40 |
neurectoderm | 3.12e-07 | 64 |
neural plate | 3.12e-07 | 64 |
presumptive neural plate | 3.12e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.