FFCP PHASE1:Mm9::chr1:166065799..166065809,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:166065799..166065809,+|id=chr1:166065799..166065809,+|ontology_enrichment_celltype=CL:0000988!2.83e-16!32;CL:0002032!2.83e-16!32;CL:0000037!2.83e-16!32;CL:0000566!2.83e-16!32;CL:0000837!2.83e-16!32;CL:0002320!1.36e-10!46;CL:0000134!1.36e-10!46;CL:0000084!1.64e-10!11;CL:0000827!1.64e-10!11;CL:0000034!6.59e-10!97;CL:0000838!1.35e-09!12;CL:0000542!8.08e-09!13;CL:0000051!8.08e-09!13;CL:0000049!1.02e-08!19;CL:0000219!1.13e-08!54;CL:0000144!3.16e-07!121;CL:0000012!3.16e-07!121;CL:0000723!4.23e-07!91;CL:0000048!4.23e-07!91;CL:0000624!7.00e-07!8|ontology_enrichment_celltype_v019_2=CL:0000355,5.44e-13,9|ontology_enrichment_disease=DOID:0060100!2.95e-12!3;DOID:4045!2.95e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-37,3;DOID:4045,2.80e-37,3;DOID:0050686,4.31e-19,6|ontology_enrichment_uberon=UBERON:0002384!1.36e-10!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.44e-13,9;UBERON:0002036,5.44e-13,9;UBERON:0002385,5.44e-13,9;UBERON:0000486,5.44e-13,9;UBERON:0007503,5.44e-13,9;UBERON:0001015,5.44e-13,9;UBERON:0002329,5.44e-13,9;UBERON:0003082,5.44e-13,9;UBERON:0003059,5.44e-13,9;UBERON:0007282,5.44e-13,9;UBERON:0004290,5.44e-13,9;UBERON:0009618,5.44e-13,9;UBERON:0000383,9.13e-12,10;UBERON:0007524,9.23e-11,11;UBERON:0003077,9.23e-11,11;UBERON:0007285,9.23e-11,11|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.513602189793617,0.0874204024189974,0,0,0,0,0,0.42438965179803,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,2.3440060335714,1.57057123192139,17.0587131528994,7.5135003345429,4.36959317728038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,2.83082697826187,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.849892149969277,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:166065799..166065809,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:166065799..166065809,+ | |||
|id=chr1:166065799..166065809,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.83e-16!32;CL:0002032!2.83e-16!32;CL:0000037!2.83e-16!32;CL:0000566!2.83e-16!32;CL:0000837!2.83e-16!32;CL:0002320!1.36e-10!46;CL:0000134!1.36e-10!46;CL:0000084!1.64e-10!11;CL:0000827!1.64e-10!11;CL:0000034!6.59e-10!97;CL:0000838!1.35e-09!12;CL:0000542!8.08e-09!13;CL:0000051!8.08e-09!13;CL:0000049!1.02e-08!19;CL:0000219!1.13e-08!54;CL:0000144!3.16e-07!121;CL:0000012!3.16e-07!121;CL:0000723!4.23e-07!91;CL:0000048!4.23e-07!91;CL:0000624!7.00e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,5.44e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.95e-12!3;DOID:4045!2.95e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-37,3;DOID:4045,2.80e-37,3;DOID:0050686,4.31e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.36e-10!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.44e-13,9;UBERON:0002036,5.44e-13,9;UBERON:0002385,5.44e-13,9;UBERON:0000486,5.44e-13,9;UBERON:0007503,5.44e-13,9;UBERON:0001015,5.44e-13,9;UBERON:0002329,5.44e-13,9;UBERON:0003082,5.44e-13,9;UBERON:0003059,5.44e-13,9;UBERON:0007282,5.44e-13,9;UBERON:0004290,5.44e-13,9;UBERON:0009618,5.44e-13,9;UBERON:0000383,9.13e-12,10;UBERON:0007524,9.23e-11,11;UBERON:0003077,9.23e-11,11;UBERON:0007285,9.23e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.513602189793617,0.0874204024189974,0,0,0,0,0,0.42438965179803,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,2.3440060335714,1.57057123192139,17.0587131528994,7.5135003345429,4.36959317728038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,2.83082697826187,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.849892149969277,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:166065799..166065809,+ | |||
}} |
Revision as of 19:29, 13 September 2013
Short description: | p@chr1:166065799..166065809, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:166065799..166065809, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 5.44e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.44e-13 | 9 |
striated muscle tissue | 5.44e-13 | 9 |
muscle tissue | 5.44e-13 | 9 |
multilaminar epithelium | 5.44e-13 | 9 |
epithelial vesicle | 5.44e-13 | 9 |
musculature | 5.44e-13 | 9 |
somite | 5.44e-13 | 9 |
myotome | 5.44e-13 | 9 |
presomitic mesoderm | 5.44e-13 | 9 |
presumptive segmental plate | 5.44e-13 | 9 |
dermomyotome | 5.44e-13 | 9 |
trunk paraxial mesoderm | 5.44e-13 | 9 |
musculature of body | 9.13e-12 | 10 |
dense mesenchyme tissue | 9.23e-11 | 11 |
paraxial mesoderm | 9.23e-11 | 11 |
presumptive paraxial mesoderm | 9.23e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.80e-37 | 3 |
muscle cancer | 2.80e-37 | 3 |
organ system cancer | 4.31e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.