FFCP PHASE1:Mm9::chr1:57028125..57028149,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=212712|HGNC=|MCL_coexpression_id=76|UniProt=Q546B3,Q8VI24|association_with_transcript=28bp_to_NM_139146,uc007bas.1,uc011wlc.1_5end|description=CAGE_peak_2_at_Satb2_5end|id=chr1:57028125..57028149,-|ontology_enrichment_celltype=CL:0002609!8.68e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,2.05e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!8.72e-11!21;UBERON:0001869!8.72e-11!21;UBERON:0000203!8.72e-11!21;UBERON:0002791!2.36e-09!29;UBERON:0003528!2.36e-09!29;UBERON:0001893!2.36e-09!29;UBERON:0002020!1.86e-08!34;UBERON:0003056!2.98e-08!49;UBERON:0002780!5.80e-08!39;UBERON:0001890!5.80e-08!39;UBERON:0006240!5.80e-08!39;UBERON:0002619!7.44e-08!17;UBERON:0003080!1.59e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.38e-14,21;UBERON:0001869,4.38e-14,21;UBERON:0000203,4.38e-14,21;UBERON:0003528,6.24e-12,29;UBERON:0002791,6.24e-12,29;UBERON:0001893,6.24e-12,29;UBERON:0002619,3.24e-10,17;UBERON:0002020,3.64e-09,34;UBERON:0002021,5.02e-08,10;UBERON:0000411,5.02e-08,10;UBERON:0001950,5.02e-08,10;UBERON:0002780,3.64e-07,39;UBERON:0001890,3.64e-07,39;UBERON:0006240,3.64e-07,39;UBERON:0003080,7.84e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,44.3791540680284,52.1122921960326,58.4703392556842,0.285650984403804,0,21.0684174649721,21.9486128631761,19.3035945188104,0,0,0,0,0.640413505216868,1.56274011167028,0,0,0,0,0.142371680799103,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.561777680527007,0.852151612890289,0,0.70667914902068,0,0,2.54805239706646,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0,0,0,2.65383165584962,7.117741397686,7.06692859073259,19.8798853785441,3.72783522436244,0,0,0,0,0,0,0,1.37250180845588,7.28795242254614,3.47648640384553,3.06858548796397,0,0.162241263067758,0,8.70848794270651,0,0,0.260240885925407,0.229902104433473,0.900310649026746,1.35634336052144,0.884474488967262,1.2811372028485,1.21812241927647,0,0.215567992932842,1.13463648100692,1.23165786914764,0.43839146485515,0.834141747676794,3.1342694986995,3.49829631893504,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,3.08713837137853,0,0,1.2797295032114,1.85789337488351,1.03093969057675,1.4117846723634,1.11189021922435,1.14135375667535,0,0.823494773620054,1.25667604400135,0.994782360205754,0.58489226135736,0,1.94524244887225,0,0,0.456994050438915,4.50830942692322,1.62921062276251,0.581857461502877,0.420814919341911,3.98390183882821,1.47610147979602,2.19798218977925,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,1.00988370881749,0,0,0.215423397732799,0.716906393857656,0.445597348164788,1.13230612315533,0,0,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.822745103010605,0.913394847343798,0.469343416127421,0,0,0.32977250588296,0,0.784068024066026,0.716234064018819,1.47726809770555,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,2.66383144048878,8.07424709485281,1.67884616364078,0,0,0,0,0,8.471277639256,3.68260189205742,7.44764167471216,4.29632955859219,2.74033007908257,3.7769694869485,2.70009000092722,2.70192721934532,2.71885445390523,1.55328093525546,1.24544817101012,4.38927360741134,0.341467211508268,5.59145449257076,2.72497111416377,3.8607136774503,5.11167473943715,7.62329711783909,5.45562656306086,4.04315538822076,6.33698249725599,6.41329560712659,4.58843386602424,5.76226371643823,5.85841783347255,9.0495801343784,6.14186927507734,7.7163688185482,2.06042950401653,5.88795680537589,4.4573002810104,5.14679837862079,6.67621331852499,6.68593516508711,6.11710972699649,5.753793336634,6.0366231048015,7.3659519202596,7.06181391998481,6.17256498823512,4.50813068871862,3.94017929502254,6.13846564754534,4.64810523557898,4.62975866354739,13.739581786587,5.38042699424439,5.37177635120746,1.91288332068843,2.8676884485537,3.47801753430632|short_description=p2@Satb2}} | ||
|EntrezGene=212712 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=Q546B3,Q8VI24 | |||
|association_with_transcript=28bp_to_NM_139146,uc007bas.1,uc011wlc.1_5end | |||
|description=CAGE_peak_2_at_Satb2_5end | |||
|id=chr1:57028125..57028149,- | |||
|ontology_enrichment_celltype=CL:0002609!8.68e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.05e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!8.72e-11!21;UBERON:0001869!8.72e-11!21;UBERON:0000203!8.72e-11!21;UBERON:0002791!2.36e-09!29;UBERON:0003528!2.36e-09!29;UBERON:0001893!2.36e-09!29;UBERON:0002020!1.86e-08!34;UBERON:0003056!2.98e-08!49;UBERON:0002780!5.80e-08!39;UBERON:0001890!5.80e-08!39;UBERON:0006240!5.80e-08!39;UBERON:0002619!7.44e-08!17;UBERON:0003080!1.59e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.38e-14,21;UBERON:0001869,4.38e-14,21;UBERON:0000203,4.38e-14,21;UBERON:0003528,6.24e-12,29;UBERON:0002791,6.24e-12,29;UBERON:0001893,6.24e-12,29;UBERON:0002619,3.24e-10,17;UBERON:0002020,3.64e-09,34;UBERON:0002021,5.02e-08,10;UBERON:0000411,5.02e-08,10;UBERON:0001950,5.02e-08,10;UBERON:0002780,3.64e-07,39;UBERON:0001890,3.64e-07,39;UBERON:0006240,3.64e-07,39;UBERON:0003080,7.84e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,44.3791540680284,52.1122921960326,58.4703392556842,0.285650984403804,0,21.0684174649721,21.9486128631761,19.3035945188104,0,0,0,0,0.640413505216868,1.56274011167028,0,0,0,0,0.142371680799103,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.561777680527007,0.852151612890289,0,0.70667914902068,0,0,2.54805239706646,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0,0,0,2.65383165584962,7.117741397686,7.06692859073259,19.8798853785441,3.72783522436244,0,0,0,0,0,0,0,1.37250180845588,7.28795242254614,3.47648640384553,3.06858548796397,0,0.162241263067758,0,8.70848794270651,0,0,0.260240885925407,0.229902104433473,0.900310649026746,1.35634336052144,0.884474488967262,1.2811372028485,1.21812241927647,0,0.215567992932842,1.13463648100692,1.23165786914764,0.43839146485515,0.834141747676794,3.1342694986995,3.49829631893504,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,3.08713837137853,0,0,1.2797295032114,1.85789337488351,1.03093969057675,1.4117846723634,1.11189021922435,1.14135375667535,0,0.823494773620054,1.25667604400135,0.994782360205754,0.58489226135736,0,1.94524244887225,0,0,0.456994050438915,4.50830942692322,1.62921062276251,0.581857461502877,0.420814919341911,3.98390183882821,1.47610147979602,2.19798218977925,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,1.00988370881749,0,0,0.215423397732799,0.716906393857656,0.445597348164788,1.13230612315533,0,0,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.822745103010605,0.913394847343798,0.469343416127421,0,0,0.32977250588296,0,0.784068024066026,0.716234064018819,1.47726809770555,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.906921534460845,2.66383144048878,8.07424709485281,1.67884616364078,0,0,0,0,0,8.471277639256,3.68260189205742,7.44764167471216,4.29632955859219,2.74033007908257,3.7769694869485,2.70009000092722,2.70192721934532,2.71885445390523,1.55328093525546,1.24544817101012,4.38927360741134,0.341467211508268,5.59145449257076,2.72497111416377,3.8607136774503,5.11167473943715,7.62329711783909,5.45562656306086,4.04315538822076,6.33698249725599,6.41329560712659,4.58843386602424,5.76226371643823,5.85841783347255,9.0495801343784,6.14186927507734,7.7163688185482,2.06042950401653,5.88795680537589,4.4573002810104,5.14679837862079,6.67621331852499,6.68593516508711,6.11710972699649,5.753793336634,6.0366231048015,7.3659519202596,7.06181391998481,6.17256498823512,4.50813068871862,3.94017929502254,6.13846564754534,4.64810523557898,4.62975866354739,13.739581786587,5.38042699424439,5.37177635120746,1.91288332068843,2.8676884485537,3.47801753430632 | |||
|short_description=p2@Satb2 | |||
}} |
Revision as of 20:34, 13 September 2013
Short description: | p2@Satb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Satb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 28bp_to_NM_139146, uc007bas.1, uc011wlc.1_5end |
EntrezGene: | Satb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.05e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.38e-14 | 21 |
cerebral hemisphere | 4.38e-14 | 21 |
pallium | 4.38e-14 | 21 |
brain grey matter | 6.24e-12 | 29 |
regional part of telencephalon | 6.24e-12 | 29 |
telencephalon | 6.24e-12 | 29 |
regional part of cerebral cortex | 3.24e-10 | 17 |
gray matter | 3.64e-09 | 34 |
occipital lobe | 5.02e-08 | 10 |
visual cortex | 5.02e-08 | 10 |
neocortex | 5.02e-08 | 10 |
regional part of forebrain | 3.64e-07 | 39 |
forebrain | 3.64e-07 | 39 |
future forebrain | 3.64e-07 | 39 |
anterior neural tube | 7.84e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.