FFCP PHASE1:Mm9::chr2:11181142..11181148,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=319|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:11181142..11181148,-|id=chr2:11181142..11181148,-|ontology_enrichment_celltype=CL:0000624!3.87e-25!8;CL:0000893!8.22e-25!6;CL:0002489!8.22e-25!6;CL:0000898!8.22e-25!6;CL:0000809!8.22e-25!6;CL:0000810!8.22e-25!6;CL:0000895!8.22e-25!6;CL:0000808!8.22e-25!6;CL:0000894!8.22e-25!6;CL:0000806!8.22e-25!6;CL:0000807!8.22e-25!6;CL:0000805!8.22e-25!6;CL:0002425!8.22e-25!6;CL:0002436!8.22e-25!6;CL:0002427!8.22e-25!6;CL:0002428!8.22e-25!6;CL:0002429!8.22e-25!6;CL:0002433!8.22e-25!6;CL:0002431!8.22e-25!6;CL:0002432!8.22e-25!6;CL:0000791!2.97e-22!9;CL:0000789!2.97e-22!9;CL:0002420!2.97e-22!9;CL:0002419!2.97e-22!9;CL:0000790!2.97e-22!9;CL:0000084!4.69e-18!11;CL:0000827!4.69e-18!11;CL:0000838!1.77e-16!12;CL:0000542!3.82e-15!13;CL:0000051!3.82e-15!13;CL:0000738!2.26e-11!17;CL:0002087!2.26e-11!17;CL:0002031!1.53e-09!25;CL:0000988!3.38e-07!32;CL:0002032!3.38e-07!32;CL:0000037!3.38e-07!32;CL:0000566!3.38e-07!32;CL:0000837!3.38e-07!32|ontology_enrichment_celltype_v019_2=CL:0000624,3.71e-65,8;CL:0000893,4.10e-60,6;CL:0002489,4.10e-60,6;CL:0000898,4.10e-60,6;CL:0000809,4.10e-60,6;CL:0000810,4.10e-60,6;CL:0000895,4.10e-60,6;CL:0000808,4.10e-60,6;CL:0000894,4.10e-60,6;CL:0000806,4.10e-60,6;CL:0000807,4.10e-60,6;CL:0000805,4.10e-60,6;CL:0002425,4.10e-60,6;CL:0002436,4.10e-60,6;CL:0002427,4.10e-60,6;CL:0002428,4.10e-60,6;CL:0002429,4.10e-60,6;CL:0002433,4.10e-60,6;CL:0002431,4.10e-60,6;CL:0002432,4.10e-60,6;CL:0000791,5.24e-58,9;CL:0000789,5.24e-58,9;CL:0002420,5.24e-58,9;CL:0002419,5.24e-58,9;CL:0000790,5.24e-58,9;CL:0000084,1.34e-47,11;CL:0000827,1.34e-47,11;CL:0000838,1.08e-43,12;CL:0000542,2.18e-40,13;CL:0000051,2.18e-40,13;CL:0000738,4.81e-31,17;CL:0002087,4.81e-31,17;CL:0002031,2.66e-21,25;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000815,3.44e-16,1;CL:0000792,3.44e-16,1;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.51e-19!23;UBERON:0000974!3.51e-19!23;UBERON:0004807!3.51e-19!23;UBERON:0005058!3.51e-19!23;UBERON:0003351!3.51e-19!23;UBERON:0009113!3.51e-19!23;UBERON:0003295!3.51e-19!23;UBERON:0009722!3.51e-19!23;UBERON:0005562!3.51e-19!23;UBERON:0007690!3.51e-19!23;UBERON:0006562!2.64e-18!24;UBERON:0003408!2.64e-18!24;UBERON:0001557!2.64e-18!24;UBERON:0001042!2.64e-18!24;UBERON:0008814!2.64e-18!24;UBERON:0009145!2.64e-18!24;UBERON:0000065!1.80e-16!41;UBERON:0000072!4.63e-16!27;UBERON:0001004!5.10e-16!42;UBERON:0004177!8.00e-15!29;UBERON:0000063!5.88e-12!35;UBERON:0002193!1.01e-11!48;UBERON:0002390!1.26e-10!45;UBERON:0003061!1.26e-10!45;UBERON:0005911!9.40e-09!69;UBERON:0005057!1.31e-07!51;UBERON:0002405!2.67e-07!70;UBERON:0003929!6.41e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.65e-16,23;UBERON:0000974,3.65e-16,23;UBERON:0004807,3.65e-16,23;UBERON:0005058,3.65e-16,23;UBERON:0003351,3.65e-16,23;UBERON:0009113,3.65e-16,23;UBERON:0003295,3.65e-16,23;UBERON:0009722,3.65e-16,23;UBERON:0005562,3.65e-16,23;UBERON:0007690,3.65e-16,23;UBERON:0006562,1.63e-15,24;UBERON:0003408,1.63e-15,24;UBERON:0001557,1.63e-15,24;UBERON:0001042,1.63e-15,24;UBERON:0008814,1.63e-15,24;UBERON:0009145,1.63e-15,24;UBERON:0000072,7.60e-14,27;UBERON:0004177,6.34e-13,29;UBERON:0005057,6.34e-13,29;UBERON:0002384,8.56e-12,46;UBERON:0000077,8.72e-11,35;UBERON:0007811,1.69e-10,36;UBERON:0000065,2.88e-09,41;UBERON:0001004,4.68e-09,42;UBERON:0000153,7.45e-09,43;UBERON:0002390,1.78e-08,45;UBERON:0003061,1.78e-08,45;UBERON:0002193,5.71e-08,48;UBERON:0002405,5.71e-08,48;UBERON:0003929,5.36e-07,55|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,1.12630977721333,3.04283884218592,1.02730780935303,1.99430397488341,0.342401459862411,3.67165690159789,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:11181142..11181148,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=319 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:11181142..11181148,- | |||
|id=chr2:11181142..11181148,- | |||
|ontology_enrichment_celltype=CL:0000624!3.87e-25!8;CL:0000893!8.22e-25!6;CL:0002489!8.22e-25!6;CL:0000898!8.22e-25!6;CL:0000809!8.22e-25!6;CL:0000810!8.22e-25!6;CL:0000895!8.22e-25!6;CL:0000808!8.22e-25!6;CL:0000894!8.22e-25!6;CL:0000806!8.22e-25!6;CL:0000807!8.22e-25!6;CL:0000805!8.22e-25!6;CL:0002425!8.22e-25!6;CL:0002436!8.22e-25!6;CL:0002427!8.22e-25!6;CL:0002428!8.22e-25!6;CL:0002429!8.22e-25!6;CL:0002433!8.22e-25!6;CL:0002431!8.22e-25!6;CL:0002432!8.22e-25!6;CL:0000791!2.97e-22!9;CL:0000789!2.97e-22!9;CL:0002420!2.97e-22!9;CL:0002419!2.97e-22!9;CL:0000790!2.97e-22!9;CL:0000084!4.69e-18!11;CL:0000827!4.69e-18!11;CL:0000838!1.77e-16!12;CL:0000542!3.82e-15!13;CL:0000051!3.82e-15!13;CL:0000738!2.26e-11!17;CL:0002087!2.26e-11!17;CL:0002031!1.53e-09!25;CL:0000988!3.38e-07!32;CL:0002032!3.38e-07!32;CL:0000037!3.38e-07!32;CL:0000566!3.38e-07!32;CL:0000837!3.38e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.71e-65,8;CL:0000893,4.10e-60,6;CL:0002489,4.10e-60,6;CL:0000898,4.10e-60,6;CL:0000809,4.10e-60,6;CL:0000810,4.10e-60,6;CL:0000895,4.10e-60,6;CL:0000808,4.10e-60,6;CL:0000894,4.10e-60,6;CL:0000806,4.10e-60,6;CL:0000807,4.10e-60,6;CL:0000805,4.10e-60,6;CL:0002425,4.10e-60,6;CL:0002436,4.10e-60,6;CL:0002427,4.10e-60,6;CL:0002428,4.10e-60,6;CL:0002429,4.10e-60,6;CL:0002433,4.10e-60,6;CL:0002431,4.10e-60,6;CL:0002432,4.10e-60,6;CL:0000791,5.24e-58,9;CL:0000789,5.24e-58,9;CL:0002420,5.24e-58,9;CL:0002419,5.24e-58,9;CL:0000790,5.24e-58,9;CL:0000084,1.34e-47,11;CL:0000827,1.34e-47,11;CL:0000838,1.08e-43,12;CL:0000542,2.18e-40,13;CL:0000051,2.18e-40,13;CL:0000738,4.81e-31,17;CL:0002087,4.81e-31,17;CL:0002031,2.66e-21,25;CL:0000988,9.31e-17,32;CL:0002032,9.31e-17,32;CL:0000037,9.31e-17,32;CL:0000837,9.31e-17,32;CL:0000815,3.44e-16,1;CL:0000792,3.44e-16,1;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000219,4.19e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.51e-19!23;UBERON:0000974!3.51e-19!23;UBERON:0004807!3.51e-19!23;UBERON:0005058!3.51e-19!23;UBERON:0003351!3.51e-19!23;UBERON:0009113!3.51e-19!23;UBERON:0003295!3.51e-19!23;UBERON:0009722!3.51e-19!23;UBERON:0005562!3.51e-19!23;UBERON:0007690!3.51e-19!23;UBERON:0006562!2.64e-18!24;UBERON:0003408!2.64e-18!24;UBERON:0001557!2.64e-18!24;UBERON:0001042!2.64e-18!24;UBERON:0008814!2.64e-18!24;UBERON:0009145!2.64e-18!24;UBERON:0000065!1.80e-16!41;UBERON:0000072!4.63e-16!27;UBERON:0001004!5.10e-16!42;UBERON:0004177!8.00e-15!29;UBERON:0000063!5.88e-12!35;UBERON:0002193!1.01e-11!48;UBERON:0002390!1.26e-10!45;UBERON:0003061!1.26e-10!45;UBERON:0005911!9.40e-09!69;UBERON:0005057!1.31e-07!51;UBERON:0002405!2.67e-07!70;UBERON:0003929!6.41e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.65e-16,23;UBERON:0000974,3.65e-16,23;UBERON:0004807,3.65e-16,23;UBERON:0005058,3.65e-16,23;UBERON:0003351,3.65e-16,23;UBERON:0009113,3.65e-16,23;UBERON:0003295,3.65e-16,23;UBERON:0009722,3.65e-16,23;UBERON:0005562,3.65e-16,23;UBERON:0007690,3.65e-16,23;UBERON:0006562,1.63e-15,24;UBERON:0003408,1.63e-15,24;UBERON:0001557,1.63e-15,24;UBERON:0001042,1.63e-15,24;UBERON:0008814,1.63e-15,24;UBERON:0009145,1.63e-15,24;UBERON:0000072,7.60e-14,27;UBERON:0004177,6.34e-13,29;UBERON:0005057,6.34e-13,29;UBERON:0002384,8.56e-12,46;UBERON:0000077,8.72e-11,35;UBERON:0007811,1.69e-10,36;UBERON:0000065,2.88e-09,41;UBERON:0001004,4.68e-09,42;UBERON:0000153,7.45e-09,43;UBERON:0002390,1.78e-08,45;UBERON:0003061,1.78e-08,45;UBERON:0002193,5.71e-08,48;UBERON:0002405,5.71e-08,48;UBERON:0003929,5.36e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,1.12630977721333,3.04283884218592,1.02730780935303,1.99430397488341,0.342401459862411,3.67165690159789,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:11181142..11181148,- | |||
}} |
Revision as of 21:36, 13 September 2013
Short description: | p@chr2:11181142..11181148, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:11181142..11181148, - |
Coexpression cluster: | MCL_coexpression_mm9:319 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.65e-16 | 23 |
neck | 3.65e-16 | 23 |
respiratory system epithelium | 3.65e-16 | 23 |
hemolymphoid system gland | 3.65e-16 | 23 |
pharyngeal epithelium | 3.65e-16 | 23 |
thymic region | 3.65e-16 | 23 |
pharyngeal gland | 3.65e-16 | 23 |
entire pharyngeal arch endoderm | 3.65e-16 | 23 |
thymus primordium | 3.65e-16 | 23 |
early pharyngeal endoderm | 3.65e-16 | 23 |
pharynx | 1.63e-15 | 24 |
gland of gut | 1.63e-15 | 24 |
upper respiratory tract | 1.63e-15 | 24 |
chordate pharynx | 1.63e-15 | 24 |
pharyngeal arch system | 1.63e-15 | 24 |
pharyngeal region of foregut | 1.63e-15 | 24 |
segment of respiratory tract | 7.60e-14 | 27 |
hemopoietic organ | 6.34e-13 | 29 |
immune organ | 6.34e-13 | 29 |
connective tissue | 8.56e-12 | 46 |
mixed endoderm/mesoderm-derived structure | 8.72e-11 | 35 |
craniocervical region | 1.69e-10 | 36 |
respiratory tract | 2.88e-09 | 41 |
respiratory system | 4.68e-09 | 42 |
anterior region of body | 7.45e-09 | 43 |
hematopoietic system | 1.78e-08 | 45 |
blood island | 1.78e-08 | 45 |
hemolymphoid system | 5.71e-08 | 48 |
immune system | 5.71e-08 | 48 |
gut epithelium | 5.36e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.