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FFCP PHASE1:Mm9::chr2:113167868..113167910,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=14260|HGNC=|MCL_coexpression_id=2|UniProt=Q05860,B1AVJ3|association_with_transcript=0bp_to_ENSMUST00000099576,ENSMUST00000110955,NM_001043322,NM_010230,uc008lpk.1,uc008lpl.1,uc008lpm.1_5end|description=CAGE_peak_4_at_Fmn1_5end|id=chr2:113167868..113167910,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,5.37e-11,9;CL:0000540,2.29e-07,33;CL:0000047,2.29e-07,33;CL:0000031,2.29e-07,33;CL:0000404,2.29e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.65e-17!102;UBERON:0000924!3.65e-17!102;UBERON:0006601!3.65e-17!102;UBERON:0001017!1.18e-13!73;UBERON:0005743!1.18e-13!73;UBERON:0000073!3.17e-13!75;UBERON:0001016!3.17e-13!75;UBERON:0002346!2.06e-12!71;UBERON:0003075!2.06e-12!71;UBERON:0007284!2.06e-12!71;UBERON:0000033!2.75e-12!63;UBERON:0002021!8.81e-10!10;UBERON:0000411!8.81e-10!10;UBERON:0001950!8.81e-10!10;UBERON:0000955!9.92e-10!50;UBERON:0006238!9.92e-10!50;UBERON:0002616!3.03e-09!49;UBERON:0001049!5.51e-09!52;UBERON:0005068!5.51e-09!52;UBERON:0006241!5.51e-09!52;UBERON:0007135!5.51e-09!52;UBERON:0003056!6.58e-09!49;UBERON:0002020!4.09e-07!34;UBERON:0002619!9.42e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.95e-24,73;UBERON:0001016,4.26e-23,75;UBERON:0004121,5.34e-23,95;UBERON:0000924,5.34e-23,95;UBERON:0006601,5.34e-23,95;UBERON:0002346,8.48e-22,64;UBERON:0003075,8.48e-22,64;UBERON:0007284,8.48e-22,64;UBERON:0010371,6.93e-18,73;UBERON:0002021,1.77e-17,10;UBERON:0000411,1.77e-17,10;UBERON:0001950,1.77e-17,10;UBERON:0000073,3.02e-17,54;UBERON:0000955,3.91e-16,47;UBERON:0006238,3.91e-16,47;UBERON:0003056,8.25e-16,49;UBERON:0002616,3.29e-15,46;UBERON:0001049,3.54e-15,52;UBERON:0005068,3.54e-15,52;UBERON:0006241,3.54e-15,52;UBERON:0007135,3.54e-15,52;UBERON:0010314,3.38e-12,92;UBERON:0003080,5.14e-12,40;UBERON:0003528,8.54e-12,29;UBERON:0002791,8.54e-12,29;UBERON:0001893,8.54e-12,29;UBERON:0002619,4.03e-11,17;UBERON:0002780,4.21e-11,39;UBERON:0001890,4.21e-11,39;UBERON:0006240,4.21e-11,39;UBERON:0002410,5.37e-11,9;UBERON:0002020,1.60e-10,34;UBERON:0000956,3.53e-10,21;UBERON:0001869,3.53e-10,21;UBERON:0000203,3.53e-10,21;UBERON:0000010,1.13e-08,11|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,5.95303031057488,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.58328969722285,0.55994568650145,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0.285650984403804,0.883474163806454,0,0,0,8.8092704799511,9.70423769447427,10.4452442614246,0,0,0,5.02529398202486,5.06486349028512,7.48711414106369,1.17851434189467,0.427115042397309,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0,0,0,1.37020655662872,1.8125651855302,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,10.5401086924157,10.4723353406728,0,0,0,0,6.14141621559773,6.8625090422794,0.376963056338593,16.6871347384585,17.1329356411321,9.76603809429932,6.97637431191358,0.305518091550949,0,0,6.10281382070775,0.130120442962704,0,0.360124259610698,1.20563854268572,1.7009124787832,1.66547836370305,1.78033276663485,16.039608985819,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,12.6173969138476,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0.685491075658373,1.1270773567308,2.03651327845314,1.55161989734101,2.94570443539338,5.37510565556187,3.24742325555125,2.511979645462,3.20832626196681,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,3.01582567878545,0,0.491764273019036,0,8.83028244932856,9.02529986759964,0,0.252470927204373,2.2085575359138,2.34263246577983,1.29254038639679,3.10659437338318,2.45078541490634,4.81230102341015,6.47697122679831,6.13737301613755,4.34816555741176,3.85585579706168,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,0,1.02131881726136,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0.220528398054962,0.49465875882444,0.645857706783622,0.180938774784468,0.716234064018819,0.328281799490123,0.582961673259701,10.0129663085675,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,20.2929457926309,0.448549638131936,0,0.583353565032143,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.524296722128554,6.76435538312817,15.8416503441826,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,15.2482997506608,21.1749608793301,14.3223878359849,20.4505286988988,28.0883833105963,24.9279986138601,22.9507650078814,24.3173449741079,30.3605414019417,26.4057758993428,0.103787347584177,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.468207537349412,0.448176066834085,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p4@Fmn1}}
|EntrezGene=14260
|HGNC=
|MCL_coexpression_id=2
|UniProt=Q05860,B1AVJ3
|association_with_transcript=0bp_to_ENSMUST00000099576,ENSMUST00000110955,NM_001043322,NM_010230,uc008lpk.1,uc008lpl.1,uc008lpm.1_5end
|description=CAGE_peak_4_at_Fmn1_5end
|id=chr2:113167868..113167910,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000107,5.37e-11,9;CL:0000540,2.29e-07,33;CL:0000047,2.29e-07,33;CL:0000031,2.29e-07,33;CL:0000404,2.29e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.65e-17!102;UBERON:0000924!3.65e-17!102;UBERON:0006601!3.65e-17!102;UBERON:0001017!1.18e-13!73;UBERON:0005743!1.18e-13!73;UBERON:0000073!3.17e-13!75;UBERON:0001016!3.17e-13!75;UBERON:0002346!2.06e-12!71;UBERON:0003075!2.06e-12!71;UBERON:0007284!2.06e-12!71;UBERON:0000033!2.75e-12!63;UBERON:0002021!8.81e-10!10;UBERON:0000411!8.81e-10!10;UBERON:0001950!8.81e-10!10;UBERON:0000955!9.92e-10!50;UBERON:0006238!9.92e-10!50;UBERON:0002616!3.03e-09!49;UBERON:0001049!5.51e-09!52;UBERON:0005068!5.51e-09!52;UBERON:0006241!5.51e-09!52;UBERON:0007135!5.51e-09!52;UBERON:0003056!6.58e-09!49;UBERON:0002020!4.09e-07!34;UBERON:0002619!9.42e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.95e-24,73;UBERON:0001016,4.26e-23,75;UBERON:0004121,5.34e-23,95;UBERON:0000924,5.34e-23,95;UBERON:0006601,5.34e-23,95;UBERON:0002346,8.48e-22,64;UBERON:0003075,8.48e-22,64;UBERON:0007284,8.48e-22,64;UBERON:0010371,6.93e-18,73;UBERON:0002021,1.77e-17,10;UBERON:0000411,1.77e-17,10;UBERON:0001950,1.77e-17,10;UBERON:0000073,3.02e-17,54;UBERON:0000955,3.91e-16,47;UBERON:0006238,3.91e-16,47;UBERON:0003056,8.25e-16,49;UBERON:0002616,3.29e-15,46;UBERON:0001049,3.54e-15,52;UBERON:0005068,3.54e-15,52;UBERON:0006241,3.54e-15,52;UBERON:0007135,3.54e-15,52;UBERON:0010314,3.38e-12,92;UBERON:0003080,5.14e-12,40;UBERON:0003528,8.54e-12,29;UBERON:0002791,8.54e-12,29;UBERON:0001893,8.54e-12,29;UBERON:0002619,4.03e-11,17;UBERON:0002780,4.21e-11,39;UBERON:0001890,4.21e-11,39;UBERON:0006240,4.21e-11,39;UBERON:0002410,5.37e-11,9;UBERON:0002020,1.60e-10,34;UBERON:0000956,3.53e-10,21;UBERON:0001869,3.53e-10,21;UBERON:0000203,3.53e-10,21;UBERON:0000010,1.13e-08,11
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,5.95303031057488,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.58328969722285,0.55994568650145,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0.285650984403804,0.883474163806454,0,0,0,8.8092704799511,9.70423769447427,10.4452442614246,0,0,0,5.02529398202486,5.06486349028512,7.48711414106369,1.17851434189467,0.427115042397309,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0,0,0,1.37020655662872,1.8125651855302,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,10.5401086924157,10.4723353406728,0,0,0,0,6.14141621559773,6.8625090422794,0.376963056338593,16.6871347384585,17.1329356411321,9.76603809429932,6.97637431191358,0.305518091550949,0,0,6.10281382070775,0.130120442962704,0,0.360124259610698,1.20563854268572,1.7009124787832,1.66547836370305,1.78033276663485,16.039608985819,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,12.6173969138476,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0.685491075658373,1.1270773567308,2.03651327845314,1.55161989734101,2.94570443539338,5.37510565556187,3.24742325555125,2.511979645462,3.20832626196681,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,3.01582567878545,0,0.491764273019036,0,8.83028244932856,9.02529986759964,0,0.252470927204373,2.2085575359138,2.34263246577983,1.29254038639679,3.10659437338318,2.45078541490634,4.81230102341015,6.47697122679831,6.13737301613755,4.34816555741176,3.85585579706168,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,0,1.02131881726136,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0.220528398054962,0.49465875882444,0.645857706783622,0.180938774784468,0.716234064018819,0.328281799490123,0.582961673259701,10.0129663085675,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,20.2929457926309,0.448549638131936,0,0.583353565032143,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.524296722128554,6.76435538312817,15.8416503441826,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,15.2482997506608,21.1749608793301,14.3223878359849,20.4505286988988,28.0883833105963,24.9279986138601,22.9507650078814,24.3173449741079,30.3605414019417,26.4057758993428,0.103787347584177,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.468207537349412,0.448176066834085,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0
|short_description=p4@Fmn1
}}

Revision as of 21:38, 13 September 2013

Short description:p4@Fmn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Fmn1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000099576, ENSMUST00000110955, NM_001043322, NM_010230, uc008lpk.1, uc008lpl.1, uc008lpm.1_5end
EntrezGene:Fmn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Fmn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D516.69
cortex, neonate N30.CNhs11107.1392-42F217.13
diencephalon, adult.CNhs10482.20-12F29.77
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A216.04
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E812.62
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D55.38
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A39.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G520.29
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H36.76
testis, neonate N30.CNhs11130.1391-42E215.84
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron5.37e-119
neuron2.29e-0733
neuronal stem cell2.29e-0733
neuroblast2.29e-0733
electrically signaling cell2.29e-0733

Uber anatomy
Ontology termp-valuen
central nervous system4.95e-2473
nervous system4.26e-2375
ectoderm-derived structure5.34e-2395
ectoderm5.34e-2395
presumptive ectoderm5.34e-2395
neurectoderm8.48e-2264
neural plate8.48e-2264
presumptive neural plate8.48e-2264
ecto-epithelium6.93e-1873
occipital lobe1.77e-1710
visual cortex1.77e-1710
neocortex1.77e-1710
regional part of nervous system3.02e-1754
brain3.91e-1647
future brain3.91e-1647
pre-chordal neural plate8.25e-1649
regional part of brain3.29e-1546
neural tube3.54e-1552
neural rod3.54e-1552
future spinal cord3.54e-1552
neural keel3.54e-1552
structure with developmental contribution from neural crest3.38e-1292
anterior neural tube5.14e-1240
brain grey matter8.54e-1229
regional part of telencephalon8.54e-1229
telencephalon8.54e-1229
regional part of cerebral cortex4.03e-1117
regional part of forebrain4.21e-1139
forebrain4.21e-1139
future forebrain4.21e-1139
autonomic nervous system5.37e-119
gray matter1.60e-1034
cerebral cortex3.53e-1021
cerebral hemisphere3.53e-1021
pallium3.53e-1021
peripheral nervous system1.13e-0811







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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