FFCP PHASE1:Hg19::chr6:75828835..75828850,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1303|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2188|TSSclassifier=S|UniProt=|association_with_transcript=-61bp_to_ENST00000493109_5end|coexpression_cluster_id=C393|description=CAGE_peak_21_at_COL12A1_5end|id=chr6:75828835..75828850,-|ontology_enrichment_celltype=CL:0000057!2.36e-08!75;CL:0000197!7.45e-08!6;CL:0000098!7.45e-08!6;CL:0002167!7.45e-08!6;CL:0002620!3.82e-07!23;CL:0002580!7.89e-07!3|ontology_enrichment_celltype_v019=CL:0002580;2.74e-12;3!CL:0002563;1.50e-09;4!CL:0002537;5.35e-08;5|ontology_enrichment_celltype_v019_2=CL:0002580,2.59e-12,3;CL:0002563,1.32e-09,4;CL:0002537,5.35e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001242;1.50e-09;4!UBERON:0001262;1.50e-09;4!UBERON:0004786;1.50e-09;4!UBERON:0004808;1.50e-09;4!UBERON:0001277;1.50e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.32e-09,4;UBERON:0001262,1.32e-09,4;UBERON:0004786,1.32e-09,4;UBERON:0004808,1.32e-09,4;UBERON:0001277,1.32e-09,4|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0.423863802319124,0,0.206105058476878,0.772921620136887,0.37223371266318,0.168776332241266,0,0.252433774244115,0.276149695926898,0,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.473107245101804,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0.992431231275107,1.38115775959256,0.280660094433074,0,0.511707249066704,0.804269605718038,0,0,0.177561725313127,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,24.648068509109,0.921482106297696,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20086027139532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.679708458751268,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p21@COL12A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2188 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-61bp_to_ENST00000493109_5end | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_21_at_COL12A1_5end | |||
|id=chr6:75828835..75828850,- | |||
|ontology_enrichment_celltype=CL:0000057!2.36e-08!75;CL:0000197!7.45e-08!6;CL:0000098!7.45e-08!6;CL:0002167!7.45e-08!6;CL:0002620!3.82e-07!23;CL:0002580!7.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;2.74e-12;3!CL:0002563;1.50e-09;4!CL:0002537;5.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.59e-12,3;CL:0002563,1.32e-09,4;CL:0002537,5.35e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.50e-09;4!UBERON:0001262;1.50e-09;4!UBERON:0004786;1.50e-09;4!UBERON:0004808;1.50e-09;4!UBERON:0001277;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.32e-09,4;UBERON:0001262,1.32e-09,4;UBERON:0004786,1.32e-09,4;UBERON:0004808,1.32e-09,4;UBERON:0001277,1.32e-09,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0.423863802319124,0,0.206105058476878,0.772921620136887,0.37223371266318,0.168776332241266,0,0.252433774244115,0.276149695926898,0,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.473107245101804,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0.992431231275107,1.38115775959256,0.280660094433074,0,0.511707249066704,0.804269605718038,0,0,0.177561725313127,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,24.648068509109,0.921482106297696,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20086027139532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.358177682162975,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.679708458751268,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p21@COL12A1 | |||
}} |
Revision as of 21:51, 13 September 2013
Short description: | p21@COL12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_COL12A1_5end |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | -61bp_to_ENST00000493109_5end |
EntrezGene: | COL12A1 |
HGNC: | 2188 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.59e-12 | 3 |
intestinal epithelial cell | 1.32e-09 | 4 |
amnion mesenchymal stem cell | 5.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.32e-09 | 4 |
wall of intestine | 1.32e-09 | 4 |
gastrointestinal system mucosa | 1.32e-09 | 4 |
gastrointestinal system epithelium | 1.32e-09 | 4 |
intestinal epithelium | 1.32e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.