FFCP PHASE1:Mm9::chr2:14525839..14525868,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12296|HGNC=|MCL_coexpression_id=3318|UniProt=Q8CC27,Q32MF3|association_with_transcript=-64bp_to_ENSMUST00000114723,NM_023116,uc008ikm.1_5end|description=CAGE_peak_1_at_Cacnb2_5end|id=chr2:14525839..14525868,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!1.77e-09!57;UBERON:0002048!7.13e-09!14;UBERON:0000117!7.13e-09!14;UBERON:0000171!7.13e-09!14;UBERON:0000170!7.13e-09!14;UBERON:0005597!7.13e-09!14;UBERON:0000118!7.13e-09!14;UBERON:0005178!5.16e-08!17;UBERON:0005181!5.16e-08!17;UBERON:0002224!5.16e-08!17;UBERON:0000915!5.16e-08!17;UBERON:0008947!5.16e-08!17;UBERON:0003258!5.16e-08!17;UBERON:0005157!5.79e-08!27;UBERON:0007100!4.28e-07!18;UBERON:0000948!4.28e-07!18;UBERON:0005498!4.28e-07!18;UBERON:0004140!4.28e-07!18;UBERON:0009881!4.28e-07!18;UBERON:0004141!4.28e-07!18;UBERON:0003084!4.28e-07!18;UBERON:0007005!4.28e-07!18;UBERON:0004139!4.28e-07!18;UBERON:0004291!4.28e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.91e-09,14;UBERON:0000117,4.91e-09,14;UBERON:0000171,4.91e-09,14;UBERON:0000170,4.91e-09,14;UBERON:0005597,4.91e-09,14;UBERON:0000118,4.91e-09,14;UBERON:0005178,3.71e-08,17;UBERON:0005181,3.71e-08,17;UBERON:0002224,3.71e-08,17;UBERON:0000915,3.71e-08,17;UBERON:0008947,3.71e-08,17;UBERON:0003258,3.71e-08,17;UBERON:0007100,7.07e-07,18;UBERON:0000948,7.07e-07,18;UBERON:0005498,7.07e-07,18;UBERON:0004140,7.07e-07,18;UBERON:0009881,7.07e-07,18;UBERON:0004141,7.07e-07,18;UBERON:0003084,7.07e-07,18;UBERON:0007005,7.07e-07,18;UBERON:0004139,7.07e-07,18;UBERON:0004291,7.07e-07,18;UBERON:0005153,9.48e-07,17|phase1_expression=4.64431656603902,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.84877930359606,5.6128571499706,5.46100231604869,8.097193463307,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,1.10128051297009,1.56478268869608,4.14247797122848,1.31811709640683,2.3331587888914,2.93971485413261,2.87505128729943,0,0,0,0.514518872071894,0.85960031981627,1.54701627683233,1.61853168687678,2.64495489636016,0.633831403506179,5.42151251310611,4.4464739805557,0,0,0,1.19840044207362,1.15265491596466,1.76272340924412,1.08004750665353,0.841299845405528,1.14260393761521,2.20868540951614,1.34739879136449,0.958454710182364,2.75765635983006,1.10115880999389,3.57524546638526,2.61131106535614,1.97829431595291,1.37231465403614,1.56274011167028,0.279182999001381,2.8138130501584,4.73674568108111,2.94628585473668,3.13217697758026,0.745597783301202,0.605809546665472,0.68014404096107,3.76823835312181,3.44169550792555,0,0,0.649776417447669,0,1.12355536105401,0,0,0,1.83096445709685,0,0,0,2.38140145112336,4.81383744402687,3.53867111510348,1.37020655662872,0.258937883647172,50.7672115601701,5.20455980298408,9.43842982767638,11.992005857315,17.4838263041042,27.3981687626192,30.2856485104518,0.988779870937496,4.77177877835708,0.884610551949874,2.75003644910596,0.662524555381181,2.42437626567611,7.45567044872489,0,0.209446706813455,4.08731288333746,3.95389910869537,1.19980546198682,3.30382590389968,3.74476598512057,50.3250663100489,4.39790232395025,8.16974304903699,9.2057564638919,6.02585329222724,15.5751612545047,12.220723662038,3.11017426525233,3.79084137650512,0.420883711772948,1.43132487258974,2.98872735763515,2.52086981727489,2.86339153887859,2.24520447199382,0.896796041993948,1.49922759295566,1.29351685369508,2.15567992932842,2.64748512234947,3.87092473160687,1.97276159184817,3.05851974148158,5.2237824978325,4.32142486456681,6.56813080501028,0.702213187313235,1.28673953557358,1.98914449576915,23.6123380690472,20.8728193383176,17.1058958387964,30.0665814193217,34.4337405557957,33.9387648352232,33.2523540993083,26.8273401399619,31.2931117544014,28.7979737348591,14.7750717671186,16.0516242900794,11.4035990191759,11.8557062257167,9.66286215074677,37.6419007929788,2.57261530948211,0.330418782983798,4.23120906661671,5.97207101498655,6.50262681209228,5.28356591420583,3.83198696784351,5.11469500843202,5.32631753115166,7.59246498471219,4.11747386810027,6.28338022000674,6.56556357735798,8.57841983324129,5.39291645192533,5.61958929674205,5.37681437786791,0.948339504765408,3.77020091612105,1.1270773567308,4.2766778847516,6.20647958936402,4.76923575254166,5.24863258131335,3.09981310757165,3.61097074035162,3.33172342588861,1.48226313543574,0.500535317148282,0.982794975566015,1.79889689907883,1.82574109249653,2.17059443777175,4.32863948028414,4.31544206176216,1.45921704097532,1.09824565275233,4.31304619582064,2.60498663367952,3.74445207737473,2.27320990152401,0.538192240565737,1.92977408545347,8.31389355749721,9.47457058852424,15.8076027148765,23.7643120085263,21.3568125942537,28.4760637651087,22.6141458841713,15.4155581807661,37.6747994413796,33.2197034473162,37.312415865852,20.3190510247515,16.4050732772601,13.8863096238251,0,0,0,0.827810238914197,1.9266070798535,1.75817529888305,0,1.00988370881749,0.631016438832513,1.17131623288992,1.07711698866399,0.238968797952552,0.445597348164788,0.283076530788832,0,0.584511715822624,0.395287777946524,6.10510501201433,24.839514911447,8.72521457969551,15.1484872198826,38.9329490215184,19.9117707509944,2.91336763385978,4.23252979750651,5.84675747243284,3.54362271456927,7.99331384654211,5.68542244970086,5.45300594216258,6.41695281092498,17.3820216864699,6.32511651449993,15.470331487228,14.9793426531667,3.78128297465751,2.32845630808958,4.28674070063185,5.49754724291048,6.0645397984704,6.2528627828806,4.26250928760439,2.3467170806371,1.48282449604674,5.07215315526412,0.98931751764888,2.26050197374268,1.80938774784468,0.716234064018819,1.31312719796049,10.7847909553045,2.59595422814714,0.170870880797853,1.857481811669,1.85194527369712,0.565105371014073,0.546776910884101,0.457556346413045,9.17883521966819,10.0765045673034,7.87739850685216,8.59203556213602,5.53587988766987,7.72613975082025,7.45236851670429,6.690825472463,7.42432716737004,12.1377911746339,17.6051860694966,7.0674104335688,8.29535829067474,0.621339313086926,0,3.58839710505549,7.77654905148359,11.2781689239548,10.5911055251739,12.164841035336,12.9092962510329,8.33308063001281,6.60613869881978,2.65742532908607,1.72818003754719,0.316011120628178,1.62180172232131,1.74608627180206,1.42912905275575,1.43221356533985,0.993406773906324,0.721172697119813,0.295379054349154,1.31256384932592,0.609654453239999,0.806609481094724,0.38983152295901,0.577271049841977,0.116876902181569,2.26730383615211,0,0.0897138566094757,0.503653849092235,26.0805951943457,18.7682475451182,17.3994043053902,5.14484109789758,7.52358156053045,1.12950368523413,0.920650473014354,2.29158205375759,1.03111909406213,5.48066015816514,2.2661816921691,2.02506750069542,4.05289082901798,2.26571204492102,1.55328093525546,0.726511433089237,4.38927360741134,3.07320490357441,3.40349403895612,2.72497111416377,1.2869045591501,4.4449345560323,5.15087643097235,7.06022261101994,4.54854981174835,5.0695859978048,6.79054828989874,4.86935838843389,5.57018825922363,5.39893408182765,6.19181798667996,5.67833197129792,5.59436739344745,3.29668720642645,6.47675248591348,5.14303878578123,5.50174999093946,5.48403236878838,5.66851024866081,5.08190654242785,4.90764725771724,4.57319932181931,4.99832451731901,4.48153575691344,5.05028044491965,7.71127617807132,4.62971067165148,6.95692773388472,4.49316839439301,4.82266527452853,1.99848462350357,4.21076895201735,4.72716318906256,2.67803664896381,2.42650561031467,1.85494268496337|short_description=p1@Cacnb2}} | ||
|EntrezGene=12296 | |||
|HGNC= | |||
|MCL_coexpression_id=3318 | |||
|UniProt=Q8CC27,Q32MF3 | |||
|association_with_transcript=-64bp_to_ENSMUST00000114723,NM_023116,uc008ikm.1_5end | |||
|description=CAGE_peak_1_at_Cacnb2_5end | |||
|id=chr2:14525839..14525868,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!1.77e-09!57;UBERON:0002048!7.13e-09!14;UBERON:0000117!7.13e-09!14;UBERON:0000171!7.13e-09!14;UBERON:0000170!7.13e-09!14;UBERON:0005597!7.13e-09!14;UBERON:0000118!7.13e-09!14;UBERON:0005178!5.16e-08!17;UBERON:0005181!5.16e-08!17;UBERON:0002224!5.16e-08!17;UBERON:0000915!5.16e-08!17;UBERON:0008947!5.16e-08!17;UBERON:0003258!5.16e-08!17;UBERON:0005157!5.79e-08!27;UBERON:0007100!4.28e-07!18;UBERON:0000948!4.28e-07!18;UBERON:0005498!4.28e-07!18;UBERON:0004140!4.28e-07!18;UBERON:0009881!4.28e-07!18;UBERON:0004141!4.28e-07!18;UBERON:0003084!4.28e-07!18;UBERON:0007005!4.28e-07!18;UBERON:0004139!4.28e-07!18;UBERON:0004291!4.28e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.91e-09,14;UBERON:0000117,4.91e-09,14;UBERON:0000171,4.91e-09,14;UBERON:0000170,4.91e-09,14;UBERON:0005597,4.91e-09,14;UBERON:0000118,4.91e-09,14;UBERON:0005178,3.71e-08,17;UBERON:0005181,3.71e-08,17;UBERON:0002224,3.71e-08,17;UBERON:0000915,3.71e-08,17;UBERON:0008947,3.71e-08,17;UBERON:0003258,3.71e-08,17;UBERON:0007100,7.07e-07,18;UBERON:0000948,7.07e-07,18;UBERON:0005498,7.07e-07,18;UBERON:0004140,7.07e-07,18;UBERON:0009881,7.07e-07,18;UBERON:0004141,7.07e-07,18;UBERON:0003084,7.07e-07,18;UBERON:0007005,7.07e-07,18;UBERON:0004139,7.07e-07,18;UBERON:0004291,7.07e-07,18;UBERON:0005153,9.48e-07,17 | |||
|phase1_expression=4.64431656603902,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.84877930359606,5.6128571499706,5.46100231604869,8.097193463307,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,1.10128051297009,1.56478268869608,4.14247797122848,1.31811709640683,2.3331587888914,2.93971485413261,2.87505128729943,0,0,0,0.514518872071894,0.85960031981627,1.54701627683233,1.61853168687678,2.64495489636016,0.633831403506179,5.42151251310611,4.4464739805557,0,0,0,1.19840044207362,1.15265491596466,1.76272340924412,1.08004750665353,0.841299845405528,1.14260393761521,2.20868540951614,1.34739879136449,0.958454710182364,2.75765635983006,1.10115880999389,3.57524546638526,2.61131106535614,1.97829431595291,1.37231465403614,1.56274011167028,0.279182999001381,2.8138130501584,4.73674568108111,2.94628585473668,3.13217697758026,0.745597783301202,0.605809546665472,0.68014404096107,3.76823835312181,3.44169550792555,0,0,0.649776417447669,0,1.12355536105401,0,0,0,1.83096445709685,0,0,0,2.38140145112336,4.81383744402687,3.53867111510348,1.37020655662872,0.258937883647172,50.7672115601701,5.20455980298408,9.43842982767638,11.992005857315,17.4838263041042,27.3981687626192,30.2856485104518,0.988779870937496,4.77177877835708,0.884610551949874,2.75003644910596,0.662524555381181,2.42437626567611,7.45567044872489,0,0.209446706813455,4.08731288333746,3.95389910869537,1.19980546198682,3.30382590389968,3.74476598512057,50.3250663100489,4.39790232395025,8.16974304903699,9.2057564638919,6.02585329222724,15.5751612545047,12.220723662038,3.11017426525233,3.79084137650512,0.420883711772948,1.43132487258974,2.98872735763515,2.52086981727489,2.86339153887859,2.24520447199382,0.896796041993948,1.49922759295566,1.29351685369508,2.15567992932842,2.64748512234947,3.87092473160687,1.97276159184817,3.05851974148158,5.2237824978325,4.32142486456681,6.56813080501028,0.702213187313235,1.28673953557358,1.98914449576915,23.6123380690472,20.8728193383176,17.1058958387964,30.0665814193217,34.4337405557957,33.9387648352232,33.2523540993083,26.8273401399619,31.2931117544014,28.7979737348591,14.7750717671186,16.0516242900794,11.4035990191759,11.8557062257167,9.66286215074677,37.6419007929788,2.57261530948211,0.330418782983798,4.23120906661671,5.97207101498655,6.50262681209228,5.28356591420583,3.83198696784351,5.11469500843202,5.32631753115166,7.59246498471219,4.11747386810027,6.28338022000674,6.56556357735798,8.57841983324129,5.39291645192533,5.61958929674205,5.37681437786791,0.948339504765408,3.77020091612105,1.1270773567308,4.2766778847516,6.20647958936402,4.76923575254166,5.24863258131335,3.09981310757165,3.61097074035162,3.33172342588861,1.48226313543574,0.500535317148282,0.982794975566015,1.79889689907883,1.82574109249653,2.17059443777175,4.32863948028414,4.31544206176216,1.45921704097532,1.09824565275233,4.31304619582064,2.60498663367952,3.74445207737473,2.27320990152401,0.538192240565737,1.92977408545347,8.31389355749721,9.47457058852424,15.8076027148765,23.7643120085263,21.3568125942537,28.4760637651087,22.6141458841713,15.4155581807661,37.6747994413796,33.2197034473162,37.312415865852,20.3190510247515,16.4050732772601,13.8863096238251,0,0,0,0.827810238914197,1.9266070798535,1.75817529888305,0,1.00988370881749,0.631016438832513,1.17131623288992,1.07711698866399,0.238968797952552,0.445597348164788,0.283076530788832,0,0.584511715822624,0.395287777946524,6.10510501201433,24.839514911447,8.72521457969551,15.1484872198826,38.9329490215184,19.9117707509944,2.91336763385978,4.23252979750651,5.84675747243284,3.54362271456927,7.99331384654211,5.68542244970086,5.45300594216258,6.41695281092498,17.3820216864699,6.32511651449993,15.470331487228,14.9793426531667,3.78128297465751,2.32845630808958,4.28674070063185,5.49754724291048,6.0645397984704,6.2528627828806,4.26250928760439,2.3467170806371,1.48282449604674,5.07215315526412,0.98931751764888,2.26050197374268,1.80938774784468,0.716234064018819,1.31312719796049,10.7847909553045,2.59595422814714,0.170870880797853,1.857481811669,1.85194527369712,0.565105371014073,0.546776910884101,0.457556346413045,9.17883521966819,10.0765045673034,7.87739850685216,8.59203556213602,5.53587988766987,7.72613975082025,7.45236851670429,6.690825472463,7.42432716737004,12.1377911746339,17.6051860694966,7.0674104335688,8.29535829067474,0.621339313086926,0,3.58839710505549,7.77654905148359,11.2781689239548,10.5911055251739,12.164841035336,12.9092962510329,8.33308063001281,6.60613869881978,2.65742532908607,1.72818003754719,0.316011120628178,1.62180172232131,1.74608627180206,1.42912905275575,1.43221356533985,0.993406773906324,0.721172697119813,0.295379054349154,1.31256384932592,0.609654453239999,0.806609481094724,0.38983152295901,0.577271049841977,0.116876902181569,2.26730383615211,0,0.0897138566094757,0.503653849092235,26.0805951943457,18.7682475451182,17.3994043053902,5.14484109789758,7.52358156053045,1.12950368523413,0.920650473014354,2.29158205375759,1.03111909406213,5.48066015816514,2.2661816921691,2.02506750069542,4.05289082901798,2.26571204492102,1.55328093525546,0.726511433089237,4.38927360741134,3.07320490357441,3.40349403895612,2.72497111416377,1.2869045591501,4.4449345560323,5.15087643097235,7.06022261101994,4.54854981174835,5.0695859978048,6.79054828989874,4.86935838843389,5.57018825922363,5.39893408182765,6.19181798667996,5.67833197129792,5.59436739344745,3.29668720642645,6.47675248591348,5.14303878578123,5.50174999093946,5.48403236878838,5.66851024866081,5.08190654242785,4.90764725771724,4.57319932181931,4.99832451731901,4.48153575691344,5.05028044491965,7.71127617807132,4.62971067165148,6.95692773388472,4.49316839439301,4.82266527452853,1.99848462350357,4.21076895201735,4.72716318906256,2.67803664896381,2.42650561031467,1.85494268496337 | |||
|short_description=p1@Cacnb2 | |||
}} |
Revision as of 22:18, 13 September 2013
Short description: | p1@Cacnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacnb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3318 |
Association with transcript: | -64bp_to_ENSMUST00000114723, NM_023116, uc008ikm.1_5end |
EntrezGene: | Cacnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 4.91e-09 | 14 |
respiratory tube | 4.91e-09 | 14 |
respiration organ | 4.91e-09 | 14 |
pair of lungs | 4.91e-09 | 14 |
lung primordium | 4.91e-09 | 14 |
lung bud | 4.91e-09 | 14 |
thoracic cavity element | 3.71e-08 | 17 |
thoracic segment organ | 3.71e-08 | 17 |
thoracic cavity | 3.71e-08 | 17 |
thoracic segment of trunk | 3.71e-08 | 17 |
respiratory primordium | 3.71e-08 | 17 |
endoderm of foregut | 3.71e-08 | 17 |
primary circulatory organ | 7.07e-07 | 18 |
heart | 7.07e-07 | 18 |
primitive heart tube | 7.07e-07 | 18 |
primary heart field | 7.07e-07 | 18 |
anterior lateral plate mesoderm | 7.07e-07 | 18 |
heart tube | 7.07e-07 | 18 |
heart primordium | 7.07e-07 | 18 |
cardiac mesoderm | 7.07e-07 | 18 |
cardiogenic plate | 7.07e-07 | 18 |
heart rudiment | 7.07e-07 | 18 |
epithelial bud | 9.48e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.