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FFCP PHASE1:Mm9::chr2:76486049..76486100,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=23992|HGNC=|UniProt=Q9WTX2,A2ATI5|association_with_transcript=0bp_to_ENSMUST00000002808,NM_011871,uc008kff.1_5end|description=CAGE_peak_1_at_Prkra_5end|id=chr2:76486049..76486100,-|ontology_enrichment_celltype=CL:0002321!6.26e-14!70;CL:0000220!6.26e-14!70;CL:0000393!7.23e-14!39;CL:0000211!7.23e-14!39;CL:0000117!8.95e-13!23;CL:0000337!8.95e-13!23;CL:0000540!1.89e-12!33;CL:0000047!1.89e-12!33;CL:0000031!1.89e-12!33;CL:0000404!1.89e-12!33;CL:0000055!5.67e-10!50;CL:0000221!3.74e-09!44;CL:0000133!3.74e-09!44;CL:0002319!9.51e-09!43|ontology_enrichment_celltype_v019_2=CL:0002321,6.26e-14,70;CL:0000393,7.23e-14,39;CL:0000211,7.23e-14,39;CL:0000117,8.95e-13,23;CL:0000337,8.95e-13,23;CL:0000540,1.89e-12,33;CL:0000047,1.89e-12,33;CL:0000031,1.89e-12,33;CL:0000404,1.89e-12,33;CL:0000221,3.74e-09,44;CL:0000133,3.74e-09,44;CL:0002319,9.51e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.00e-07!15;UBERON:0001242!5.84e-07!13;UBERON:0000060!5.84e-07!13;UBERON:0001262!5.84e-07!13;UBERON:0004786!5.84e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.82e-09,31;UBERON:0000344,2.00e-07,15;UBERON:0001242,5.84e-07,13;UBERON:0001262,5.84e-07,13;UBERON:0004786,5.84e-07,13|phase1_expression=27.225304007815,31.0588112799031,36.8549383905524,42.3449895829562,38.0680754759224,24.342494427224,17.0537227634734,4.39019299701359,0.563154888606667,1.17032263160997,0.171217968225505,0.797721589953364,3.76641605848653,2.53519167015092,9.32707333083856,5.06188168474565,4.19737126876888,4.57420139769445,3.15363197293199,5.94145512517242,14.0321428749265,9.13476751048145,2.87319768052829,22.7189240366637,25.9232487605902,41.3447014162815,39.6301036466349,20.9007095705312,33.6341452437782,41.5849714103886,22.3947815761858,12.7006134691926,15.9916844771988,0,36.1064524689093,29.7560015191701,33.2796050707662,17.996860121687,22.6587249911902,17.7998072951091,14.1175557127443,23.2235464885872,20.8769451803396,25.1793635951155,26.1552482546348,22.7597972680485,14.0830441982647,21.3664653252838,16.2567775223509,26.2480363750283,24.6376102060638,18.6878333674463,2.51673909086605,1.45072428402269,1.34437519656986,23.4106086792712,24.3553423947943,20.6268836910977,30.9544185115185,44.4352422588508,36.1283899998522,15.5868484751801,10.6715375533337,13.9484456178617,10.8775299882367,24.1563239081674,9.28760342607055,8.83702102239575,26.4408511386618,30.6463480012938,31.1280942800045,29.136400409188,31.5842013560807,30.2552274060936,34.1209876824921,26.6573448116906,27.5289702498472,21.8345348125671,24.2698322544865,41.0166354840903,46.3842353064217,38.0266760506435,23.7305549151174,30.3891809417107,32.2404302809069,34.7661730858928,33.4573449877892,38.7710847316625,7.42116694665204,14.2830248601825,14.4932244350839,18.0689014166091,13.599426674155,32.382191498269,16.2444104361917,22.4013443548668,14.4657752735704,20.622069031945,26.4981724694926,26.8538076627859,28.8729010542195,25.6652954828636,17.8363667794652,42.6640021891999,20.1336668140429,17.7351905832569,20.2209778005913,15.300639882354,14.7594593678888,17.6646145487141,17.5220180033797,20.0947215686013,23.522780720118,24.7185130506301,21.4011446986983,20.2323212040778,9.39340877390621,19.0871151134283,5.30766331169925,14.5590164952668,9.93786833071771,8.24287930329878,26.0948465705371,16.9812862266697,12.1479089951804,27.5893619625279,14.3778149407104,20.9965955847693,18.2981126985213,26.0635712564392,10.5225138648284,29.654427098636,10.6032835317289,12.0186264945255,20.1554403222773,18.8199865158599,20.3678727700633,14.4312085907708,28.3049489445716,17.0457903268044,20.5590299881072,22.5304062344803,16.2055916824814,21.5507889505073,21.5675702309709,22.163673609279,22.8632207925738,19.4027528054262,21.3412313003514,19.6670323374532,22.6976950171494,23.2347476373229,29.1949611686878,18.4573648256748,17.4914815946752,26.0734889532226,22.4708219940235,17.2423097766859,12.2190304740105,15.5344329401626,14.3060896588469,16.2055855314913,15.3884078130387,17.3152523937715,15.8895126274,19.3003174142839,15.5598572811779,17.5148013550754,14.4812667923863,19.043425833175,14.5113169087082,17.1053985287639,15.3685080703735,15.2995317386824,8.62188789112922,24.2854885215111,41.9631854389423,29.3540128996534,24.1015723104814,20.4368271237186,18.0414445850931,18.7565677899709,22.0154263406422,18.0714344806931,30.3698599388487,23.5519505255336,22.1174983744237,20.8904295643208,18.5215882763164,25.1669434423182,28.962498683209,27.8797782556114,25.2258308267599,23.8779391354333,20.2873924211545,20.1614814566861,20.9468686141036,21.1810176068762,20.8048207138806,18.3036583494707,21.1948282585856,20.8541207027843,16.6013471168803,5.83957870006329,6.4864468387357,6.07127703439105,6.28866376304359,6.51178331331525,7.63877555344259,12.3709339103849,10.2145192868272,9.33508804839477,7.18841032636773,16.0020607497456,12.793544597697,19.4485736019276,19.3749206603665,24.6046195895317,12.5632169313291,21.0335467065238,22.48916674899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|EntrezGene=23992
|HGNC=
|UniProt=Q9WTX2,A2ATI5
|association_with_transcript=0bp_to_ENSMUST00000002808,NM_011871,uc008kff.1_5end
|description=CAGE_peak_1_at_Prkra_5end
|id=chr2:76486049..76486100,-
|ontology_enrichment_celltype=CL:0002321!6.26e-14!70;CL:0000220!6.26e-14!70;CL:0000393!7.23e-14!39;CL:0000211!7.23e-14!39;CL:0000117!8.95e-13!23;CL:0000337!8.95e-13!23;CL:0000540!1.89e-12!33;CL:0000047!1.89e-12!33;CL:0000031!1.89e-12!33;CL:0000404!1.89e-12!33;CL:0000055!5.67e-10!50;CL:0000221!3.74e-09!44;CL:0000133!3.74e-09!44;CL:0002319!9.51e-09!43
|ontology_enrichment_celltype_v019_2=CL:0002321,6.26e-14,70;CL:0000393,7.23e-14,39;CL:0000211,7.23e-14,39;CL:0000117,8.95e-13,23;CL:0000337,8.95e-13,23;CL:0000540,1.89e-12,33;CL:0000047,1.89e-12,33;CL:0000031,1.89e-12,33;CL:0000404,1.89e-12,33;CL:0000221,3.74e-09,44;CL:0000133,3.74e-09,44;CL:0002319,9.51e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!2.00e-07!15;UBERON:0001242!5.84e-07!13;UBERON:0000060!5.84e-07!13;UBERON:0001262!5.84e-07!13;UBERON:0004786!5.84e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.82e-09,31;UBERON:0000344,2.00e-07,15;UBERON:0001242,5.84e-07,13;UBERON:0001262,5.84e-07,13;UBERON:0004786,5.84e-07,13
|phase1_expression=27.225304007815,31.0588112799031,36.8549383905524,42.3449895829562,38.0680754759224,24.342494427224,17.0537227634734,4.39019299701359,0.563154888606667,1.17032263160997,0.171217968225505,0.797721589953364,3.76641605848653,2.53519167015092,9.32707333083856,5.06188168474565,4.19737126876888,4.57420139769445,3.15363197293199,5.94145512517242,14.0321428749265,9.13476751048145,2.87319768052829,22.7189240366637,25.9232487605902,41.3447014162815,39.6301036466349,20.9007095705312,33.6341452437782,41.5849714103886,22.3947815761858,12.7006134691926,15.9916844771988,0,36.1064524689093,29.7560015191701,33.2796050707662,17.996860121687,22.6587249911902,17.7998072951091,14.1175557127443,23.2235464885872,20.8769451803396,25.1793635951155,26.1552482546348,22.7597972680485,14.0830441982647,21.3664653252838,16.2567775223509,26.2480363750283,24.6376102060638,18.6878333674463,2.51673909086605,1.45072428402269,1.34437519656986,23.4106086792712,24.3553423947943,20.6268836910977,30.9544185115185,44.4352422588508,36.1283899998522,15.5868484751801,10.6715375533337,13.9484456178617,10.8775299882367,24.1563239081674,9.28760342607055,8.83702102239575,26.4408511386618,30.6463480012938,31.1280942800045,29.136400409188,31.5842013560807,30.2552274060936,34.1209876824921,26.6573448116906,27.5289702498472,21.8345348125671,24.2698322544865,41.0166354840903,46.3842353064217,38.0266760506435,23.7305549151174,30.3891809417107,32.2404302809069,34.7661730858928,33.4573449877892,38.7710847316625,7.42116694665204,14.2830248601825,14.4932244350839,18.0689014166091,13.599426674155,32.382191498269,16.2444104361917,22.4013443548668,14.4657752735704,20.622069031945,26.4981724694926,26.8538076627859,28.8729010542195,25.6652954828636,17.8363667794652,42.6640021891999,20.1336668140429,17.7351905832569,20.2209778005913,15.300639882354,14.7594593678888,17.6646145487141,17.5220180033797,20.0947215686013,23.522780720118,24.7185130506301,21.4011446986983,20.2323212040778,9.39340877390621,19.0871151134283,5.30766331169925,14.5590164952668,9.93786833071771,8.24287930329878,26.0948465705371,16.9812862266697,12.1479089951804,27.5893619625279,14.3778149407104,20.9965955847693,18.2981126985213,26.0635712564392,10.5225138648284,29.654427098636,10.6032835317289,12.0186264945255,20.1554403222773,18.8199865158599,20.3678727700633,14.4312085907708,28.3049489445716,17.0457903268044,20.5590299881072,22.5304062344803,16.2055916824814,21.5507889505073,21.5675702309709,22.163673609279,22.8632207925738,19.4027528054262,21.3412313003514,19.6670323374532,22.6976950171494,23.2347476373229,29.1949611686878,18.4573648256748,17.4914815946752,26.0734889532226,22.4708219940235,17.2423097766859,12.2190304740105,15.5344329401626,14.3060896588469,16.2055855314913,15.3884078130387,17.3152523937715,15.8895126274,19.3003174142839,15.5598572811779,17.5148013550754,14.4812667923863,19.043425833175,14.5113169087082,17.1053985287639,15.3685080703735,15.2995317386824,8.62188789112922,24.2854885215111,41.9631854389423,29.3540128996534,24.1015723104814,20.4368271237186,18.0414445850931,18.7565677899709,22.0154263406422,18.0714344806931,30.3698599388487,23.5519505255336,22.1174983744237,20.8904295643208,18.5215882763164,25.1669434423182,28.962498683209,27.8797782556114,25.2258308267599,23.8779391354333,20.2873924211545,20.1614814566861,20.9468686141036,21.1810176068762,20.8048207138806,18.3036583494707,21.1948282585856,20.8541207027843,16.6013471168803,5.83957870006329,6.4864468387357,6.07127703439105,6.28866376304359,6.51178331331525,7.63877555344259,12.3709339103849,10.2145192868272,9.33508804839477,7.18841032636773,16.0020607497456,12.793544597697,19.4485736019276,19.3749206603665,24.6046195895317,12.5632169313291,21.0335467065238,22.4891667489996,23.424821836976,22.5302638356962,21.4408009525524,20.7097967570832,15.8058254764817,18.9162172927429,13.9522754478728,20.8885746941308,17.3695113598682,15.3689633860647,19.0936757327595,19.6028669121054,17.9488875660174,17.7035138286853,18.4877620024171,21.0321272884007,20.2776217804511,30.327964894685,9.08895337935743,26.8181986503818,17.9601822376454,19.3881057959519,24.8527549870654,19.3834846451683,22.0799694015289,19.8357243820698,21.0424217696145,19.7643888973262,10.9249247583414,22.710413633323,22.4362660620742,23.7814960656221,18.476653772924,13.2745138339963,23.3069410708782,22.0696196584268,16.2200368590072,11.5167738223501,18.1386737286917,17.8315522286073,18.5402202033528,19.9638531895444,14.8537276229834,17.9211634577498,18.5643977846736,23.8307724027652,22.3275756598825,21.3441828241545,22.9340627483804,23.4089108407801,16.0531935841863,21.5559216988778,18.8768268451052,8.68285319835728,10.591603543191,20.2886126210565,12.5313552235525,18.2454802166373,12.4847754601283,11.4597450243011,10.669158483429,23.6099477670179,17.0591277849669,8.03093139749908,15.0662413613152,12.9636169158798,9.41842285023455,6.15124024744613,7.32090154260872,17.677756719361,15.3946597556024,13.5435974328335,22.9120948323627,20.5618395827738,17.6887936400358,21.6010681643603,20.9088296014469,23.5831568845872,20.7691093432624,19.2582551840033,21.7257431846745,34.2183529490333,16.1548221402601,17.4744810992099,23.9226473670366,20.8477697975943,29.3621294399512,26.7360834598903,29.5673219608862,35.9113150256007,31.9000742867678,42.9923312145415,27.0574215325127,15.8416503441826,5.05617793005085,15.2043911467623,14.8930887889,10.0039033692902,10.9206284357164,5.16571522431289,6.37035882455835,7.67985541307802,5.25025539730368,6.85861259894999,7.25948532985252,6.1398464866044,5.96513418170043,6.66198342434943,12.923631866067,12.8751852956958,9.5993826572139,9.73730774911655,21.6372345316053,18.0175176433135,16.8499494325884,16.0776284309299,21.0660283694853,14.1187960654267,8.74617949363636,15.4681788628637,8.248952752497,11.6464028361009,15.8632718451837,15.5255175053315,9.45674526770863,9.5159905886683,13.9795284172991,23.1445785112714,12.768795948833,19.122163844463,13.8570828728928,20.3324767749143,21.5096904886517,24.2248933303761,18.9552252659783,20.5388294138762,23.2481434822694,19.010947491768,17.5422497489051,17.510961896868,18.3111935877926,18.2070436589294,12.3836359733599,21.3227159738534,16.976011400806,18.9559514369521,18.1054671765309,20.9150243955103,19.5223386775271,16.9289694862598,19.040380578835,18.5395479418201,20.392120501894,19.2074371516411,17.6256706663355,15.6174730922741,26.9348290395714,16.2529974830119,19.405383027986,12.2769312950907,18.5924209423159,17.3615949883027,22.4829520144151,18.4805970671873,20.6276211886366,20.8504281955039,16.1031735957246,13.4483344659844
|short_description=p1@Prkra
}}

Revision as of 00:34, 14 September 2013

Short description:p1@Prkra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Prkra_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000002808, NM_011871, uc008kff.1_5end
EntrezGene:Prkra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Prkra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G727.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I531.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I636.85
CD326+ enterocyte, pool1.CNhs13542.11848-124I342.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I438.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D122.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.92
GP2+ M cell, pool1.CNhs13228.11845-124H941.34
GP2+ M cell, pool2.CNhs13231.11846-124I139.63
GP2+ M cell, pool3.CNhs13240.11847-124I220.90
Ileum epithelium, pool1.CNhs13199.10252-104B933.63
Ileum epithelium, pool2.CNhs13232.10253-104C141.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F536.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F629.76
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H122.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.76
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C326.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E124.36
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.63
Mouse Granule cells, donor1.CNhs12131.11713-123C330.95
Mouse Granule cells, donor2.CNhs12357.11731-123E344.44
Mouse Granule cells, donor3.CNhs12108.11636-122C736.13
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.59
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.16
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.13
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.26
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F446.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D838.03
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I632.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.77
Mouse Schwann, donor1.CNhs12507.11728-123D97.42
Mouse Schwann, donor2.CNhs12573.11746-123F914.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.40
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E326.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.85
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.30
accessory axillary lymph node, adult.CNhs10475.1063-29H914.76
adrenal gland, adult.CNhs10508.49-24D717.66
adrenal gland, embryo E14.CNhs11038.406-44C517.52
adrenal gland, embryo E16.CNhs11004.1254-43D620.09
adrenal gland, embryo E17.CNhs11043.1263-45I123.52
adrenal gland, embryo E18.CNhs11026.1262-18F524.72
adrenal gland, neonate N00.CNhs11191.1311-23C121.40
adrenal gland, neonate N25.CNhs11223.1377-27I320.23
amnion, adult pregnant day17.5.CNhs10488.583-22A89.39
aorta, adult.CNhs10498.46-23H119.09
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F514.56
bone (os femoris), neonate N16.CNhs11225.1525-43A69.94
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I212.15
colon, adult.CNhs10468.36-18H727.59
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.38
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.30
corpora quadrigemina, adult.CNhs10501.16-22A426.06
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F129.65
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F220.16
diencephalon, neonate N30.CNhs11201.1388-42B218.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.37
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.43
epididymis, adult.CNhs10490.58-23B228.30
eyeball, adult.CNhs10484.31-12G417.05
eyeball, embryo E12.CNhs11016.345-16C620.56
eyeball, embryo E14.CNhs10521.399-16E222.53
eyeball, embryo E15.CNhs10593.426-16C916.21
eyeball, embryo E17.CNhs11023.1261-18D421.55
eyeball, neonate N00.CNhs11207.633-15C621.57
eyeball, neonate N01.CNhs11140.1532-43E722.16
eyeball, neonate N02.CNhs11205.1551-44G822.86
eyeball, neonate N16.CNhs11188.777-19A219.40
forelimb, embryo E11.CNhs10596.335-25E221.34
forelimb, embryo E12.CNhs10600.359-14H219.67
forelimb, embryo E13.CNhs10589.384-1E222.70
forelimb, embryo E14.CNhs10577.413-26A823.23
forelimb, embryo E15.CNhs11007.437-20E729.19
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B517.49
gonad, embryo E13.CNhs11044.1564-45I626.07
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C822.47
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.22
heart, embryo E11.CNhs10586.331-24E915.53
heart, embryo E12.CNhs11015.353-12F514.31
heart, embryo E13.CNhs11013.376-3I916.21
heart, embryo E14.CNhs10597.403-26D415.39
heart, embryo E15.CNhs11017.431-16C817.32
heart, embryo E16.CNhs11021.457-17C615.89
heart, embryo E17.CNhs11025.479-18E519.30
heart, embryo E18.CNhs11030.1283-20G315.56
heart, neonate N00.CNhs11213.639-21E317.51
heart, neonate N03.CNhs11221.1349-25I214.48
heart, neonate N10.CNhs11118.749-24G119.04
heart, neonate N16.CNhs11209.782-15G114.51
heart, neonate N20.CNhs11127.821-26I617.11
heart, neonate N25.CNhs11196.1351-25D315.37
heart, neonate N30.CNhs11202.1390-42D215.30
hippocampus, adult.CNhs10478.13-16E88.62
hippocampus, neonate N00.CNhs11228.627-43G124.29
intestinal mucosa, adult.CNhs10506.860-29I341.96
intestine, adult.CNhs10496.178-9A329.35
intestine, embryo E12.CNhs11019.1251-16I524.10
intestine, embryo E13.CNhs11010.381-16D520.44
intestine, embryo E15.CNhs10602.976-16D818.04
intestine, embryo E16.CNhs10585.463-22H418.76
intestine, embryo E17.CNhs10582.482-18D322.02
intestine, embryo E18.CNhs10526.1289-20F718.07
intestine, neonate N00.CNhs11126.644-26D130.37
intestine, neonate N01.CNhs11192.1322-23E923.55
intestine, neonate N06.CNhs11102.688-20B822.12
intestine, neonate N07.CNhs11095.720-20F220.89
intestine, neonate N10.CNhs11098.755-23A518.52
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E328.96
intestine, neonate N30.CNhs11131.1384-42G127.88
kidney, embryo E14.CNhs10606.411-4I925.23
kidney, embryo E15.CNhs10997.434-16F823.88
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I220.16
kidney, embryo E18.CNhs11001.1288-20C720.95
kidney, neonate N00.CNhs11214.646-21G721.18
kidney, neonate N10.CNhs11206.758-6D520.80
kidney, neonate N20.CNhs11113.832-19I118.30
kidney, neonate N25.CNhs11122.1353-25F321.19
kidney, neonate N30.CNhs11203.1385-42H120.85
liver, adult pregnant day01.CNhs10466.508-5B216.60
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G412.37
liver, neonate N00.CNhs11117.641-24F410.21
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A319.45
liver, neonate N25.CNhs11198.1368-26H119.37
liver, neonate N30.CNhs11106.1382-42D124.60
lung, adult.CNhs10474.28-22B112.56
lung, embryo E12.CNhs10522.354-16G221.03
lung, embryo E14.CNhs10604.404-26F822.49
lung, embryo E15.CNhs11020.432-17C523.42
lung, embryo E16.CNhs10998.458-17B622.53
lung, embryo E17.CNhs10605.480-44A621.44
lung, embryo E18.CNhs10583.1287-20I620.71
lung, neonate N00.CNhs11224.640-42C615.81
lung, neonate N06.CNhs11212.683-20E518.92
lung, neonate N07.CNhs11111.715-19A313.95
lung, neonate N10.CNhs11219.750-23E620.89
lung, neonate N20.CNhs11109.822-18A417.37
lung, neonate N25.CNhs11119.1359-25C715.37
lung, neonate N30.CNhs11133.1394-42H219.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B617.70
mammary gland, adult pregnant day19.CNhs10476.588-5H218.49
medulla oblongata, adult.CNhs10477.17-12C221.03
medulla oblongata, neonate N30.CNhs11200.1396-42A320.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C730.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.82
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.85
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.76
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I722.71
ovary, embryo E18.CNhs11040.505-44H722.44
ovary, neonate N00.CNhs11217.1299-22I423.78
oviduct, adult pregnant day01.CNhs10500.988-6G618.48
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F423.31
pancreas, embryo E15.CNhs11042.1556-45F222.07
pancreas, embryo E16.CNhs11003.460-26E516.22
pancreas, embryo E17.CNhs10599.1558-45G311.52
pancreas, embryo E18.CNhs10580.1535-43I718.14
pancreas, neonate N00.CNhs11105.645-26G917.83
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D819.96
pancreas, neonate N16.CNhs11136.787-43B614.85
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G823.83
pituitary gland, embryo E12.CNhs11018.346-16E622.33
pituitary gland, embryo E13.CNhs11009.370-44C721.34
pituitary gland, embryo E14.CNhs11037.398-44A522.93
pituitary gland, embryo E15.CNhs10592.427-16B923.41
pituitary gland, embryo E16.CNhs11036.449-43F616.05
pituitary gland, embryo E17.CNhs11039.1265-44F521.56
pituitary gland, neonate N00.CNhs11190.1308-22E918.88
placenta, adult pregnant day10.CNhs10472.539-13I78.68
placenta, adult pregnant day17.CNhs10464.577-18G310.59
prostate, adult.CNhs10470.859-1F820.29
skin, adult.CNhs10492.30-1C312.53
skin, neonate N00.CNhs11124.650-25G418.25
skin, neonate N03.CNhs11215.662-22H312.48
skin, neonate N06.CNhs11097.693-20I511.46
skin, neonate N10.CNhs11108.762-6C410.67
small intestine, neonate N16.CNhs11114.790-21I123.61
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C115.07
spleen, embryo E18.CNhs11011.1271-21F212.96
spleen, neonate N10.CNhs11116.752-24D19.42
spleen, neonate N20.CNhs11112.824-19H16.15
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.54
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E320.56
stomach, embryo E15.CNhs10603.1252-16G817.69
stomach, embryo E16.CNhs11022.459-17D421.60
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C623.58
stomach, neonate N03.CNhs11193.1340-24B820.77
stomach, neonate N07.CNhs11210.718-18A919.26
stomach, neonate N25.CNhs11104.1355-25E421.73
stomach, neonate N30.CNhs11134.1386-42I134.22
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F523.92
testis, embryo E15.CNhs11034.443-27C520.85
testis, embryo E16.CNhs11033.470-26G529.36
testis, embryo E17.CNhs11029.486-18I526.74
testis, embryo E18.CNhs11027.503-18G529.57
testis, neonate N00.CNhs11189.1300-22B735.91
testis, neonate N07.CNhs11222.726-26I431.90
testis, neonate N10.CNhs11204.763-44D942.99
testis, neonate N20.CNhs11110.839-18H327.06
testis, neonate N30.CNhs11130.1391-42E215.84
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I415.20
thymus, embryo E15.CNhs11005.430-45I214.89
thymus, embryo E16.CNhs11002.456-26C510.00
thymus, embryo E17.CNhs10581.478-18C110.92
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C77.68
thymus, neonate N06.CNhs11197.681-26C45.25
thymus, neonate N07.CNhs11211.713-19D36.86
thymus, neonate N10.CNhs11194.748-24E47.26
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G26.66
tongue, adult.CNhs10499.32-1B412.92
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.60
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.74
urinary bladder, adult.CNhs10481.879-12E421.64
uterus, adult pregnant day19.CNhs10497.590-15F518.02
uterus, adult.CNhs10509.92-27E516.85
vagina, adult.CNhs10502.89-27D516.08
vesicular gland, adult.CNhs10491.51-27F821.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I823.14
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H219.12
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B120.33
whole body, embryo E16.CNhs10514.453-14F221.51
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.54
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.54
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.51
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G519.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.59
whole body, embryo E17.5.CNhs10513.490-9F917.36
whole body, embryo E17.CNhs10517.475-3I522.48
whole body, embryo E18.CNhs10516.493-3B318.48
whole body, neonate N00.CNhs10525.657-19C220.63
whole body, neonate N01.CNhs10576.659-23C620.85
whole body, neonate N06.CNhs10515.692-21D116.10
whole body, neonate N10.CNhs10518.761-6B413.45





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell6.26e-1470
electrically responsive cell7.23e-1439
electrically active cell7.23e-1439
CNS neuron (sensu Vertebrata)8.95e-1323
neuroblast (sensu Vertebrata)8.95e-1323
neuron1.89e-1233
neuronal stem cell1.89e-1233
neuroblast1.89e-1233
electrically signaling cell1.89e-1233
ectodermal cell3.74e-0944
neurectodermal cell3.74e-0944
neural cell9.51e-0943

Uber anatomy
Ontology termp-valuen
intestine2.82e-0931
mucosa2.00e-0715
intestinal mucosa5.84e-0713
wall of intestine5.84e-0713
gastrointestinal system mucosa5.84e-0713







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