FFCP PHASE1:Mm9::chr3:104666786..104666789,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:104666786..104666789,-|id=chr3:104666786..104666789,-|ontology_enrichment_celltype=CL:0000838!9.63e-07!12|ontology_enrichment_celltype_v019_2=CL:0000355,6.62e-14,9|ontology_enrichment_disease=DOID:0060100!1.82e-16!3;DOID:4045!1.82e-16!3;DOID:0050686!1.75e-08!6|ontology_enrichment_disease_v019_2=DOID:0060100,4.15e-39,3;DOID:4045,4.15e-39,3;DOID:0050686,3.10e-20,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.62e-14,9;UBERON:0002036,6.62e-14,9;UBERON:0002385,6.62e-14,9;UBERON:0000486,6.62e-14,9;UBERON:0007503,6.62e-14,9;UBERON:0001015,6.62e-14,9;UBERON:0002329,6.62e-14,9;UBERON:0003082,6.62e-14,9;UBERON:0003059,6.62e-14,9;UBERON:0007282,6.62e-14,9;UBERON:0004290,6.62e-14,9;UBERON:0009618,6.62e-14,9;UBERON:0000383,1.24e-12,10;UBERON:0007524,1.36e-11,11;UBERON:0003077,1.36e-11,11;UBERON:0007285,1.36e-11,11|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,1.0470474879476,6.47054636834116,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:104666786..104666789,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:104666786..104666789,- | |||
|id=chr3:104666786..104666789,- | |||
|ontology_enrichment_celltype=CL:0000838!9.63e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,6.62e-14,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.82e-16!3;DOID:4045!1.82e-16!3;DOID:0050686!1.75e-08!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.15e-39,3;DOID:4045,4.15e-39,3;DOID:0050686,3.10e-20,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.62e-14,9;UBERON:0002036,6.62e-14,9;UBERON:0002385,6.62e-14,9;UBERON:0000486,6.62e-14,9;UBERON:0007503,6.62e-14,9;UBERON:0001015,6.62e-14,9;UBERON:0002329,6.62e-14,9;UBERON:0003082,6.62e-14,9;UBERON:0003059,6.62e-14,9;UBERON:0007282,6.62e-14,9;UBERON:0004290,6.62e-14,9;UBERON:0009618,6.62e-14,9;UBERON:0000383,1.24e-12,10;UBERON:0007524,1.36e-11,11;UBERON:0003077,1.36e-11,11;UBERON:0007285,1.36e-11,11 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,1.0470474879476,6.47054636834116,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:104666786..104666789,- | |||
}} |
Revision as of 01:06, 14 September 2013
Short description: | p@chr3:104666786..104666789, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:104666786..104666789, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 6.62e-14 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 6.62e-14 | 9 |
striated muscle tissue | 6.62e-14 | 9 |
muscle tissue | 6.62e-14 | 9 |
multilaminar epithelium | 6.62e-14 | 9 |
epithelial vesicle | 6.62e-14 | 9 |
musculature | 6.62e-14 | 9 |
somite | 6.62e-14 | 9 |
myotome | 6.62e-14 | 9 |
presomitic mesoderm | 6.62e-14 | 9 |
presumptive segmental plate | 6.62e-14 | 9 |
dermomyotome | 6.62e-14 | 9 |
trunk paraxial mesoderm | 6.62e-14 | 9 |
musculature of body | 1.24e-12 | 10 |
dense mesenchyme tissue | 1.36e-11 | 11 |
paraxial mesoderm | 1.36e-11 | 11 |
presumptive paraxial mesoderm | 1.36e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.15e-39 | 3 |
muscle cancer | 4.15e-39 | 3 |
organ system cancer | 3.10e-20 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.