FFCP PHASE1:Mm9::chr3:146114587..146114592,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:146114587..146114592,+|id=chr3:146114587..146114592,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,8.40e-09,9|ontology_enrichment_disease=DOID:0060100!4.65e-12!3;DOID:4045!4.65e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.99e-24,3;DOID:4045,2.99e-24,3;DOID:0050686,1.08e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,2.61761871986899,8.2352408324342,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.62799699626633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:146114587..146114592,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:146114587..146114592,+ | |||
|id=chr3:146114587..146114592,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,8.40e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.65e-12!3;DOID:4045!4.65e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.99e-24,3;DOID:4045,2.99e-24,3;DOID:0050686,1.08e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,2.61761871986899,8.2352408324342,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.62799699626633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:146114587..146114592,+ | |||
}} |
Revision as of 01:46, 14 September 2013
Short description: | p@chr3:146114587..146114592, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:146114587..146114592, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 8.40e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 8.40e-09 | 9 |
striated muscle tissue | 8.40e-09 | 9 |
muscle tissue | 8.40e-09 | 9 |
multilaminar epithelium | 8.40e-09 | 9 |
epithelial vesicle | 8.40e-09 | 9 |
musculature | 8.40e-09 | 9 |
somite | 8.40e-09 | 9 |
myotome | 8.40e-09 | 9 |
presomitic mesoderm | 8.40e-09 | 9 |
presumptive segmental plate | 8.40e-09 | 9 |
dermomyotome | 8.40e-09 | 9 |
trunk paraxial mesoderm | 8.40e-09 | 9 |
musculature of body | 5.10e-08 | 10 |
dense mesenchyme tissue | 2.24e-07 | 11 |
paraxial mesoderm | 2.24e-07 | 11 |
presumptive paraxial mesoderm | 2.24e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.99e-24 | 3 |
muscle cancer | 2.99e-24 | 3 |
organ system cancer | 1.08e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.