FFCP PHASE1:Hg19::chr7:70229719..70229735,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26053|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14262|TSSclassifier=W|UniProt=|association_with_transcript=-163bp_to_ENST00000443672_5end|description=CAGE_peak_13_at_AUTS2_5end|id=chr7:70229719..70229735,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006298;1.88e-08;1!UBERON:0005425;1.88e-08;1!UBERON:0004874;4.40e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;1.22e-08;1!DOID:0070004;1.22e-08;1|ontology_enrichment_disease_v019_2=DOID:4960,1.22e-08,1;DOID:0070004,1.22e-08,1|ontology_enrichment_uberon=UBERON:0000073!5.19e-17!94;UBERON:0001016!5.19e-17!94;UBERON:0001017!9.91e-15!82;UBERON:0000924!2.21e-14!173;UBERON:0006601!2.21e-14!173;UBERON:0004121!5.56e-14!169;UBERON:0005743!6.28e-14!86;UBERON:0001049!1.56e-13!57;UBERON:0005068!1.56e-13!57;UBERON:0006241!1.56e-13!57;UBERON:0007135!1.56e-13!57;UBERON:0002346!1.89e-12!90;UBERON:0003075!4.06e-12!86;UBERON:0007284!4.06e-12!86;UBERON:0007023!7.54e-12!115;UBERON:0000153!2.93e-11!129;UBERON:0007811!2.93e-11!129;UBERON:0002020!3.74e-11!34;UBERON:0003528!3.74e-11!34;UBERON:0000955!3.98e-11!69;UBERON:0006238!3.98e-11!69;UBERON:0001893!1.14e-10!34;UBERON:0002616!1.44e-10!59;UBERON:0002791!2.27e-10!33;UBERON:0000033!2.30e-10!123;UBERON:0001869!1.64e-09!32;UBERON:0002780!2.87e-09!41;UBERON:0001890!2.87e-09!41;UBERON:0006240!2.87e-09!41;UBERON:0003080!7.52e-09!42;UBERON:0002619!1.06e-08!22;UBERON:0003056!3.79e-08!61;UBERON:0000956!4.26e-08!25;UBERON:0000203!4.26e-08!25;UBERON:0001950!2.69e-07!20|ontology_enrichment_uberon_v019=UBERON:0001736;1.88e-08;1!UBERON:0000941;1.88e-08;1!UBERON:0001785;1.88e-08;1!UBERON:0002464;1.88e-08;1!UBERON:0004904;1.88e-08;1!UBERON:0001021;1.88e-08;1!UBERON:0000989;4.40e-08;1!UBERON:0008811;4.40e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.41e-08,1;UBERON:0001785,1.41e-08,1;UBERON:0002464,1.41e-08,1;UBERON:0004904,1.41e-08,1;UBERON:0001021,1.41e-08,1;UBERON:0003902,1.41e-08,1;UBERON:0005425,1.41e-08,1;UBERON:0001736,1.63e-08,1;UBERON:0006298,1.63e-08,1;UBERON:0000989,3.33e-08,1;UBERON:0008811,3.33e-08,1;UBERON:0006258,3.33e-08,1;UBERON:0005876,3.33e-08,1;UBERON:0004874,3.33e-08,1|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.410623275218653,0,2.75088260692625,3.11982239909794,2.75487734597877,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0.289693037921647,0,0,0.472674085820339,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0.500474079487857,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0.323292113637624,0.355009592516614,0,0.169560592310488,0,0,0,0.121973706129595,0.662648841607426,0,0.207322110030741,0.756962552626885,1.09493207722749,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.985326475791887,0.088048434013226,0,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.591092280605782,0.431255149719035,0.128343036279748,0.254094624222463,0,1.54657762555539,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.702848489956279,0,2.27407504055985,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0,0,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.284567373393656,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,1.22587722705226,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0.552567831062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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14262 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-163bp_to_ENST00000443672_5end | |||
|description=CAGE_peak_13_at_AUTS2_5end | |||
|id=chr7:70229719..70229735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.88e-08;1!UBERON:0005425;1.88e-08;1!UBERON:0004874;4.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.22e-08;1!DOID:0070004;1.22e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.22e-08,1;DOID:0070004,1.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.19e-17!94;UBERON:0001016!5.19e-17!94;UBERON:0001017!9.91e-15!82;UBERON:0000924!2.21e-14!173;UBERON:0006601!2.21e-14!173;UBERON:0004121!5.56e-14!169;UBERON:0005743!6.28e-14!86;UBERON:0001049!1.56e-13!57;UBERON:0005068!1.56e-13!57;UBERON:0006241!1.56e-13!57;UBERON:0007135!1.56e-13!57;UBERON:0002346!1.89e-12!90;UBERON:0003075!4.06e-12!86;UBERON:0007284!4.06e-12!86;UBERON:0007023!7.54e-12!115;UBERON:0000153!2.93e-11!129;UBERON:0007811!2.93e-11!129;UBERON:0002020!3.74e-11!34;UBERON:0003528!3.74e-11!34;UBERON:0000955!3.98e-11!69;UBERON:0006238!3.98e-11!69;UBERON:0001893!1.14e-10!34;UBERON:0002616!1.44e-10!59;UBERON:0002791!2.27e-10!33;UBERON:0000033!2.30e-10!123;UBERON:0001869!1.64e-09!32;UBERON:0002780!2.87e-09!41;UBERON:0001890!2.87e-09!41;UBERON:0006240!2.87e-09!41;UBERON:0003080!7.52e-09!42;UBERON:0002619!1.06e-08!22;UBERON:0003056!3.79e-08!61;UBERON:0000956!4.26e-08!25;UBERON:0000203!4.26e-08!25;UBERON:0001950!2.69e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;1.88e-08;1!UBERON:0000941;1.88e-08;1!UBERON:0001785;1.88e-08;1!UBERON:0002464;1.88e-08;1!UBERON:0004904;1.88e-08;1!UBERON:0001021;1.88e-08;1!UBERON:0000989;4.40e-08;1!UBERON:0008811;4.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.41e-08,1;UBERON:0001785,1.41e-08,1;UBERON:0002464,1.41e-08,1;UBERON:0004904,1.41e-08,1;UBERON:0001021,1.41e-08,1;UBERON:0003902,1.41e-08,1;UBERON:0005425,1.41e-08,1;UBERON:0001736,1.63e-08,1;UBERON:0006298,1.63e-08,1;UBERON:0000989,3.33e-08,1;UBERON:0008811,3.33e-08,1;UBERON:0006258,3.33e-08,1;UBERON:0005876,3.33e-08,1;UBERON:0004874,3.33e-08,1 | |||
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| |||
|short_description=p13@AUTS2 | |||
}} |
Revision as of 01:50, 14 September 2013
Short description: | p13@AUTS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_AUTS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -163bp_to_ENST00000443672_5end |
EntrezGene: | AUTS2 |
HGNC: | 14262 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.41e-08 | 1 |
cranial nerve | 1.41e-08 | 1 |
nerve trunk | 1.41e-08 | 1 |
nerve connecting eye with brain | 1.41e-08 | 1 |
nerve | 1.41e-08 | 1 |
retinal neural layer | 1.41e-08 | 1 |
presumptive neural retina | 1.41e-08 | 1 |
submandibular gland | 1.63e-08 | 1 |
submandibular gland primordium | 1.63e-08 | 1 |
penis | 3.33e-08 | 1 |
intromittent organ | 3.33e-08 | 1 |
lateral plate mesenchyme | 3.33e-08 | 1 |
undifferentiated genital tubercle | 3.33e-08 | 1 |
somatopleure | 3.33e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.22e-08 | 1 |
myeloma | 1.22e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.