FFCP PHASE1:Mm9::chr3:25926282..25926291,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=199|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:25926282..25926291,-|id=chr3:25926282..25926291,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!9.15e-15!10;UBERON:0000411!9.15e-15!10;UBERON:0001950!9.15e-15!10;UBERON:0000033!7.93e-14!63;UBERON:0002346!2.03e-12!71;UBERON:0003075!2.03e-12!71;UBERON:0007284!2.03e-12!71;UBERON:0000955!1.66e-11!50;UBERON:0006238!1.66e-11!50;UBERON:0003056!3.64e-11!49;UBERON:0001049!8.85e-11!52;UBERON:0005068!8.85e-11!52;UBERON:0006241!8.85e-11!52;UBERON:0007135!8.85e-11!52;UBERON:0002616!1.40e-10!49;UBERON:0002619!1.53e-09!17;UBERON:0007811!6.17e-09!86;UBERON:0000956!7.46e-09!21;UBERON:0001869!7.46e-09!21;UBERON:0000203!7.46e-09!21;UBERON:0004121!9.52e-09!102;UBERON:0000924!9.52e-09!102;UBERON:0006601!9.52e-09!102;UBERON:0002020!1.08e-08!34;UBERON:0001017!1.30e-08!73;UBERON:0005743!1.30e-08!73;UBERON:0000153!2.34e-08!94;UBERON:0000073!3.27e-08!75;UBERON:0001016!3.27e-08!75;UBERON:0002791!4.85e-08!29;UBERON:0003528!4.85e-08!29;UBERON:0001893!4.85e-08!29;UBERON:0003080!1.01e-07!40;UBERON:0002780!5.22e-07!39;UBERON:0001890!5.22e-07!39;UBERON:0006240!5.22e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.54e-24,10;UBERON:0000411,5.54e-24,10;UBERON:0001950,5.54e-24,10;UBERON:0002619,2.20e-14,17;UBERON:0000956,9.30e-12,21;UBERON:0001869,9.30e-12,21;UBERON:0000203,9.30e-12,21;UBERON:0003056,4.27e-11,49;UBERON:0003528,1.16e-08,29;UBERON:0002791,1.16e-08,29;UBERON:0001893,1.16e-08,29;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73;UBERON:0002020,1.86e-07,34;UBERON:0000970,2.54e-07,9;UBERON:0000019,2.54e-07,9;UBERON:0000047,2.54e-07,9;UBERON:0010312,2.54e-07,9;UBERON:0004088,2.54e-07,9;UBERON:0002104,2.54e-07,9;UBERON:0001456,2.54e-07,9;UBERON:0003072,2.54e-07,9;UBERON:0004128,2.54e-07,9;UBERON:0003071,2.54e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.916789486660861,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0.521472960576829,0.767146371990992,0.20778804455956,0,0.101839363850316,0,0,0,0.260240885925407,0,0,0.90422890701429,1.08858398642125,1.0249097622788,0.562210347358373,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,1.71868654031819,1.20297227640581,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0.685738504770831,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr3:25926282..25926291,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=199 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:25926282..25926291,- | |||
|id=chr3:25926282..25926291,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!9.15e-15!10;UBERON:0000411!9.15e-15!10;UBERON:0001950!9.15e-15!10;UBERON:0000033!7.93e-14!63;UBERON:0002346!2.03e-12!71;UBERON:0003075!2.03e-12!71;UBERON:0007284!2.03e-12!71;UBERON:0000955!1.66e-11!50;UBERON:0006238!1.66e-11!50;UBERON:0003056!3.64e-11!49;UBERON:0001049!8.85e-11!52;UBERON:0005068!8.85e-11!52;UBERON:0006241!8.85e-11!52;UBERON:0007135!8.85e-11!52;UBERON:0002616!1.40e-10!49;UBERON:0002619!1.53e-09!17;UBERON:0007811!6.17e-09!86;UBERON:0000956!7.46e-09!21;UBERON:0001869!7.46e-09!21;UBERON:0000203!7.46e-09!21;UBERON:0004121!9.52e-09!102;UBERON:0000924!9.52e-09!102;UBERON:0006601!9.52e-09!102;UBERON:0002020!1.08e-08!34;UBERON:0001017!1.30e-08!73;UBERON:0005743!1.30e-08!73;UBERON:0000153!2.34e-08!94;UBERON:0000073!3.27e-08!75;UBERON:0001016!3.27e-08!75;UBERON:0002791!4.85e-08!29;UBERON:0003528!4.85e-08!29;UBERON:0001893!4.85e-08!29;UBERON:0003080!1.01e-07!40;UBERON:0002780!5.22e-07!39;UBERON:0001890!5.22e-07!39;UBERON:0006240!5.22e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.54e-24,10;UBERON:0000411,5.54e-24,10;UBERON:0001950,5.54e-24,10;UBERON:0002619,2.20e-14,17;UBERON:0000956,9.30e-12,21;UBERON:0001869,9.30e-12,21;UBERON:0000203,9.30e-12,21;UBERON:0003056,4.27e-11,49;UBERON:0003528,1.16e-08,29;UBERON:0002791,1.16e-08,29;UBERON:0001893,1.16e-08,29;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73;UBERON:0002020,1.86e-07,34;UBERON:0000970,2.54e-07,9;UBERON:0000019,2.54e-07,9;UBERON:0000047,2.54e-07,9;UBERON:0010312,2.54e-07,9;UBERON:0004088,2.54e-07,9;UBERON:0002104,2.54e-07,9;UBERON:0001456,2.54e-07,9;UBERON:0003072,2.54e-07,9;UBERON:0004128,2.54e-07,9;UBERON:0003071,2.54e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0.916789486660861,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0.521472960576829,0.767146371990992,0.20778804455956,0,0.101839363850316,0,0,0,0.260240885925407,0,0,0.90422890701429,1.08858398642125,1.0249097622788,0.562210347358373,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,1.71868654031819,1.20297227640581,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0.685738504770831,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:25926282..25926291,- | |||
}} |
Revision as of 02:01, 14 September 2013
Short description: | p@chr3:25926282..25926291, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:25926282..25926291, - |
Coexpression cluster: | MCL_coexpression_mm9:199 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.54e-24 | 10 |
visual cortex | 5.54e-24 | 10 |
neocortex | 5.54e-24 | 10 |
regional part of cerebral cortex | 2.20e-14 | 17 |
cerebral cortex | 9.30e-12 | 21 |
cerebral hemisphere | 9.30e-12 | 21 |
pallium | 9.30e-12 | 21 |
pre-chordal neural plate | 4.27e-11 | 49 |
brain grey matter | 1.16e-08 | 29 |
regional part of telencephalon | 1.16e-08 | 29 |
telencephalon | 1.16e-08 | 29 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |
gray matter | 1.86e-07 | 34 |
eye | 2.54e-07 | 9 |
camera-type eye | 2.54e-07 | 9 |
simple eye | 2.54e-07 | 9 |
immature eye | 2.54e-07 | 9 |
ocular region | 2.54e-07 | 9 |
visual system | 2.54e-07 | 9 |
face | 2.54e-07 | 9 |
optic cup | 2.54e-07 | 9 |
optic vesicle | 2.54e-07 | 9 |
eye primordium | 2.54e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.