FFCP PHASE1:Mm9::chr3:57105879..57105919,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17112|HGNC=|MCL_coexpression_id=152|UniProt=Q64302|association_with_transcript=-38bp_to_ENSMUST00000029376,NM_008536,uc008pgy.1,uc008pgz.1_5end|description=CAGE_peak_5_at_Tm4sf1_5end|id=chr3:57105879..57105919,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,8.42e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!5.64e-09!14;UBERON:0000117!5.64e-09!14;UBERON:0000171!5.64e-09!14;UBERON:0000170!5.64e-09!14;UBERON:0005597!5.64e-09!14;UBERON:0000118!5.64e-09!14|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.45e-14,14;UBERON:0000117,1.45e-14,14;UBERON:0000171,1.45e-14,14;UBERON:0000170,1.45e-14,14;UBERON:0005597,1.45e-14,14;UBERON:0000118,1.45e-14,14;UBERON:0005153,1.86e-11,17;UBERON:0005178,1.86e-11,17;UBERON:0005181,1.86e-11,17;UBERON:0002224,1.86e-11,17;UBERON:0000915,1.86e-11,17;UBERON:0008947,1.86e-11,17;UBERON:0003258,1.86e-11,17;UBERON:0005157,2.71e-09,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.09843091367236,2.52758868796568,1.53985063787899,1.43752564364972,0,0,0,0,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,1.49800055259202,6.53171119046643,0,0,0,1.14260393761521,1.10434270475807,0,0,0,2.20231761998777,0.893811366596314,0.307213066512487,0.263772575460388,0.182975287204819,0,0.279182999001381,1.12552522006336,1.06958773443767,1.47314292736834,3.13217697758026,0.931997229126503,0,0,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,2.09706895166752,1.83000241127451,1.00523481690292,0,0,2.70124457927428,0.973447578406546,0.203678727700633,1.11966273549084,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.804820204198858,0.116765342367169,0,0.164167464079095,0,0,0,0,2.10289948564127,2.98423375899925,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,17.5515530658274,0,0,0.169745085775188,2.11221223459652,3.85264392116176,9.75978927632656,10.5372169843211,6.30540576424764,6.64394068946325,5.42146213435456,6.882259218061,7.59813920209941,10.2700831592873,0,0,0,0,1.44495530989013,0.703270119553219,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,11.2132667314532,0,0.162886959353576,16.6619824202261,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0.483168241652012,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0.147689527174577,0.302899349844443,0.15241361331,0.201652370273681,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,1.33348036680969,1.03017528619447,1.28367683836726,1.01078884705519,1.77435509923168,1.32038438970253,0.936415074698824,0.960377286073039,0.976402972245426,0.476293691283074,0.347652977834566,1.15745532278223,1.23625770240992,0.883193520806384,1.37147700954166,1.4198064492747,1.43061713968393,1.45346416632329,0.658765662907314,1.09998990259179,1.46342378298218,1.8414879800649,1.22223702461276,0.561142271657738,1.42362021749009,0.886540341380071,0,0.619747364743864,1.15743966588685,1.74867404556562,0.935726433781634,1.28922632428979,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p5@Tm4sf1}} | ||
|EntrezGene=17112 | |||
|HGNC= | |||
|MCL_coexpression_id=152 | |||
|UniProt=Q64302 | |||
|association_with_transcript=-38bp_to_ENSMUST00000029376,NM_008536,uc008pgy.1,uc008pgz.1_5end | |||
|description=CAGE_peak_5_at_Tm4sf1_5end | |||
|id=chr3:57105879..57105919,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,8.42e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!5.64e-09!14;UBERON:0000117!5.64e-09!14;UBERON:0000171!5.64e-09!14;UBERON:0000170!5.64e-09!14;UBERON:0005597!5.64e-09!14;UBERON:0000118!5.64e-09!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.45e-14,14;UBERON:0000117,1.45e-14,14;UBERON:0000171,1.45e-14,14;UBERON:0000170,1.45e-14,14;UBERON:0005597,1.45e-14,14;UBERON:0000118,1.45e-14,14;UBERON:0005153,1.86e-11,17;UBERON:0005178,1.86e-11,17;UBERON:0005181,1.86e-11,17;UBERON:0002224,1.86e-11,17;UBERON:0000915,1.86e-11,17;UBERON:0008947,1.86e-11,17;UBERON:0003258,1.86e-11,17;UBERON:0005157,2.71e-09,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.09843091367236,2.52758868796568,1.53985063787899,1.43752564364972,0,0,0,0,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,1.49800055259202,6.53171119046643,0,0,0,1.14260393761521,1.10434270475807,0,0,0,2.20231761998777,0.893811366596314,0.307213066512487,0.263772575460388,0.182975287204819,0,0.279182999001381,1.12552522006336,1.06958773443767,1.47314292736834,3.13217697758026,0.931997229126503,0,0,0,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,2.09706895166752,1.83000241127451,1.00523481690292,0,0,2.70124457927428,0.973447578406546,0.203678727700633,1.11966273549084,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.804820204198858,0.116765342367169,0,0.164167464079095,0,0,0,0,2.10289948564127,2.98423375899925,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,17.5515530658274,0,0,0.169745085775188,2.11221223459652,3.85264392116176,9.75978927632656,10.5372169843211,6.30540576424764,6.64394068946325,5.42146213435456,6.882259218061,7.59813920209941,10.2700831592873,0,0,0,0,1.44495530989013,0.703270119553219,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,11.2132667314532,0,0.162886959353576,16.6619824202261,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0.483168241652012,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0.147689527174577,0.302899349844443,0.15241361331,0.201652370273681,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,1.33348036680969,1.03017528619447,1.28367683836726,1.01078884705519,1.77435509923168,1.32038438970253,0.936415074698824,0.960377286073039,0.976402972245426,0.476293691283074,0.347652977834566,1.15745532278223,1.23625770240992,0.883193520806384,1.37147700954166,1.4198064492747,1.43061713968393,1.45346416632329,0.658765662907314,1.09998990259179,1.46342378298218,1.8414879800649,1.22223702461276,0.561142271657738,1.42362021749009,0.886540341380071,0,0.619747364743864,1.15743966588685,1.74867404556562,0.935726433781634,1.28922632428979,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Tm4sf1 | |||
}} |
Revision as of 02:20, 14 September 2013
Short description: | p5@Tm4sf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tm4sf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:152 |
Association with transcript: | -38bp_to_ENSMUST00000029376, NM_008536, uc008pgy.1, uc008pgz.1_5end |
EntrezGene: | Tm4sf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 8.42e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung | 1.45e-14 | 14 |
respiratory tube | 1.45e-14 | 14 |
respiration organ | 1.45e-14 | 14 |
pair of lungs | 1.45e-14 | 14 |
lung primordium | 1.45e-14 | 14 |
lung bud | 1.45e-14 | 14 |
epithelial bud | 1.86e-11 | 17 |
thoracic cavity element | 1.86e-11 | 17 |
thoracic segment organ | 1.86e-11 | 17 |
thoracic cavity | 1.86e-11 | 17 |
thoracic segment of trunk | 1.86e-11 | 17 |
respiratory primordium | 1.86e-11 | 17 |
endoderm of foregut | 1.86e-11 | 17 |
epithelial fold | 2.71e-09 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.