FFCP PHASE1:Mm9::chr3:94641604..94641615,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=229584|HGNC=|UniProt=|association_with_transcript=-3bp_to_ENSMUST00000107265_5end|description=CAGE_peak_5_at_Pogz_5end|id=chr3:94641604..94641615,+|ontology_enrichment_celltype=CL:0000540!5.11e-07!33;CL:0000047!5.11e-07!33;CL:0000031!5.11e-07!33;CL:0000404!5.11e-07!33;CL:0000117!5.18e-07!23;CL:0000337!5.18e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.56e-07,23;CL:0000337,1.56e-07,23;CL:0000540,2.49e-07,33;CL:0000047,2.49e-07,33;CL:0000031,2.49e-07,33;CL:0000404,2.49e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!5.60e-08!94;UBERON:0003056!8.46e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.51e-08,64;UBERON:0003075,5.51e-08,64;UBERON:0007284,5.51e-08,64;UBERON:0010371,5.48e-07,73;UBERON:0003056,6.19e-07,49|phase1_expression=1.12104192973356,0.348975407639361,0.909998478779072,0.30246421130683,0,0.503637815735669,0.467225281191051,0.645616617207881,2.25261955442667,3.5109678948299,0.856089841127525,0.8774937489487,2.05440875917447,1.74840804837995,0.666219523631325,0.404950534779652,0.699561878128147,1.73504190947031,0.685572168028694,0,1.02051948181284,0.496454756004426,0.522399578277871,0.95995453676044,0.22940928106717,0,0.430761996159075,0.646413698057667,0.950117097281869,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,0.288851619751275,0.997407872150954,1.02084678131185,0,0,0.523523743973798,0,2.04913645487534,0.971020706062307,1.51076181570693,0.811015449756117,0.550640256485045,0,0.218025156380447,0.659058548203415,0.58328969722285,0.699932108126813,1.43752564364972,0.671130424230945,0.725362142011344,1.34437519656986,0,1.14613375975503,0.515672092277442,3.03474691289397,2.11596391708813,1.90149421051854,0.338844532069132,0,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,2.28117147078651,2.56511282830212,2.94454945891935,1.42825492201902,1.76694832761291,1.95985278743926,2.1086003624012,1.83843757322004,1.10115880999389,1.27687338085188,1.68967186581868,2.1101806036831,2.10421580285542,3.64639359389732,2.23346399201105,1.12552522006336,0.61119299110724,1.17851434189467,1.70846016958924,3.16879057903011,0.454357159999104,0.755715601067855,2.02905142091174,0,0,0.539703191637817,0,0.896053774194671,0.842666520790511,0.170430322578058,1.03914401841148,1.06001872353102,1.69012103732017,0,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,2.33044095282455,1.48442139064825,1.04091196059682,0.913396434936424,0.691846491768175,0.753613202763113,1.29347577849275,0.879666139307728,0.741584903203122,1.15679485535929,1.76922110389975,0.485300549842228,0.220841518460394,1.45462575940567,0,3.22058876712702,1.25668024088073,1.02182822083437,0.958520996047362,0,0.508280908292259,1.9472783122627,1.37250180845588,2.38743269014442,1.56441888173049,0.767146371990992,1.66230435647648,2.27137768294861,1.12023300235348,1.24406970610093,1.26361379216837,1.89397670297827,1.04096354370163,1.60931473103431,1.98068342785884,1.80845781402858,1.49680298132921,2.69038812598185,1.49922759295566,3.3631438196072,0.862271971731369,2.64748512234947,1.58356011747554,1.97276159184817,2.78047249225598,2.43776516565517,0.823128545631774,1.39323986772945,0.702213187313235,0.772043721344145,0.284163499395593,0.621377317606506,0.469052119962192,1.2604344302271,0.946978942340841,1.57411385397923,1.23413690309903,1.16266972375204,0.804820204198858,0.934122738937356,1.31647879930784,2.46251196118643,1.4592385718254,1.31579988682799,1.53685080703735,0.939444931322602,1.68231958851302,2.6755199218614,0.660837565967596,0.264450566663544,1.91959425481711,1.16118335930219,1.41754207454303,1.81515172161008,1.55664630691409,0.951128130562796,0.949058123089023,1.15289268306808,1.50801125280162,1.1937388322469,1.16978452271472,1.79763881730844,1.08069024937347,0.796565093017469,0.569003702859245,1.82797620175566,2.25415471346161,1.22190796707189,1.93952487167626,1.75339549725796,2.27651533647326,2.36176236767363,2.19798218977925,1.72756029490521,1.48226313543574,0.83422552858047,0.982794975566015,0.449724224769707,0.405720242777006,0.241177159752417,0,0.287696137450811,0.972811360650212,0.549122826376163,2.87536413054709,0.744281895337007,1.24815069245824,0.505157755894224,1.07638448113147,1.92977408545347,1.47802552133284,0.568474235311454,1.14075483509418,1.86719594352707,1.64283173801951,1.17254380209271,1.6663054862021,0.975668239288994,1.89162172927429,2.43611158613652,3.02964060449226,0.81931657357869,1.55416483679306,1.01254341007058,4.52373851817817,1.08781136763742,0.983528546038072,1.93155722413313,1.60550589987792,0.820481806145422,0.655739781506702,1.26235463602186,1.57754109708128,2.34263246577983,2.15423397732799,1.43381278771531,0.668396022247182,1.41538265394416,1.21443210502468,0.876767573733936,1.58115111178609,3.21321316421807,2.6968616189571,2.13678724400706,1.14020871547503,2.14461159864296,1.32745138339963,0.485561272309963,1.51161778482376,0.754420319023592,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| ||
|EntrezGene=229584 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENSMUST00000107265_5end | |||
|description=CAGE_peak_5_at_Pogz_5end | |||
|id=chr3:94641604..94641615,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.11e-07!33;CL:0000047!5.11e-07!33;CL:0000031!5.11e-07!33;CL:0000404!5.11e-07!33;CL:0000117!5.18e-07!23;CL:0000337!5.18e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.56e-07,23;CL:0000337,1.56e-07,23;CL:0000540,2.49e-07,33;CL:0000047,2.49e-07,33;CL:0000031,2.49e-07,33;CL:0000404,2.49e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!5.60e-08!94;UBERON:0003056!8.46e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.51e-08,64;UBERON:0003075,5.51e-08,64;UBERON:0007284,5.51e-08,64;UBERON:0010371,5.48e-07,73;UBERON:0003056,6.19e-07,49 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0.909998478779072,0.30246421130683,0,0.503637815735669,0.467225281191051,0.645616617207881,2.25261955442667,3.5109678948299,0.856089841127525,0.8774937489487,2.05440875917447,1.74840804837995,0.666219523631325,0.404950534779652,0.699561878128147,1.73504190947031,0.685572168028694,0,1.02051948181284,0.496454756004426,0.522399578277871,0.95995453676044,0.22940928106717,0,0.430761996159075,0.646413698057667,0.950117097281869,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,0.288851619751275,0.997407872150954,1.02084678131185,0,0,0.523523743973798,0,2.04913645487534,0.971020706062307,1.51076181570693,0.811015449756117,0.550640256485045,0,0.218025156380447,0.659058548203415,0.58328969722285,0.699932108126813,1.43752564364972,0.671130424230945,0.725362142011344,1.34437519656986,0,1.14613375975503,0.515672092277442,3.03474691289397,2.11596391708813,1.90149421051854,0.338844532069132,0,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,2.28117147078651,2.56511282830212,2.94454945891935,1.42825492201902,1.76694832761291,1.95985278743926,2.1086003624012,1.83843757322004,1.10115880999389,1.27687338085188,1.68967186581868,2.1101806036831,2.10421580285542,3.64639359389732,2.23346399201105,1.12552522006336,0.61119299110724,1.17851434189467,1.70846016958924,3.16879057903011,0.454357159999104,0.755715601067855,2.02905142091174,0,0,0.539703191637817,0,0.896053774194671,0.842666520790511,0.170430322578058,1.03914401841148,1.06001872353102,1.69012103732017,0,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,2.33044095282455,1.48442139064825,1.04091196059682,0.913396434936424,0.691846491768175,0.753613202763113,1.29347577849275,0.879666139307728,0.741584903203122,1.15679485535929,1.76922110389975,0.485300549842228,0.220841518460394,1.45462575940567,0,3.22058876712702,1.25668024088073,1.02182822083437,0.958520996047362,0,0.508280908292259,1.9472783122627,1.37250180845588,2.38743269014442,1.56441888173049,0.767146371990992,1.66230435647648,2.27137768294861,1.12023300235348,1.24406970610093,1.26361379216837,1.89397670297827,1.04096354370163,1.60931473103431,1.98068342785884,1.80845781402858,1.49680298132921,2.69038812598185,1.49922759295566,3.3631438196072,0.862271971731369,2.64748512234947,1.58356011747554,1.97276159184817,2.78047249225598,2.43776516565517,0.823128545631774,1.39323986772945,0.702213187313235,0.772043721344145,0.284163499395593,0.621377317606506,0.469052119962192,1.2604344302271,0.946978942340841,1.57411385397923,1.23413690309903,1.16266972375204,0.804820204198858,0.934122738937356,1.31647879930784,2.46251196118643,1.4592385718254,1.31579988682799,1.53685080703735,0.939444931322602,1.68231958851302,2.6755199218614,0.660837565967596,0.264450566663544,1.91959425481711,1.16118335930219,1.41754207454303,1.81515172161008,1.55664630691409,0.951128130562796,0.949058123089023,1.15289268306808,1.50801125280162,1.1937388322469,1.16978452271472,1.79763881730844,1.08069024937347,0.796565093017469,0.569003702859245,1.82797620175566,2.25415471346161,1.22190796707189,1.93952487167626,1.75339549725796,2.27651533647326,2.36176236767363,2.19798218977925,1.72756029490521,1.48226313543574,0.83422552858047,0.982794975566015,0.449724224769707,0.405720242777006,0.241177159752417,0,0.287696137450811,0.972811360650212,0.549122826376163,2.87536413054709,0.744281895337007,1.24815069245824,0.505157755894224,1.07638448113147,1.92977408545347,1.47802552133284,0.568474235311454,1.14075483509418,1.86719594352707,1.64283173801951,1.17254380209271,1.6663054862021,0.975668239288994,1.89162172927429,2.43611158613652,3.02964060449226,0.81931657357869,1.55416483679306,1.01254341007058,4.52373851817817,1.08781136763742,0.983528546038072,1.93155722413313,1.60550589987792,0.820481806145422,0.655739781506702,1.26235463602186,1.57754109708128,2.34263246577983,2.15423397732799,1.43381278771531,0.668396022247182,1.41538265394416,1.21443210502468,0.876767573733936,1.58115111178609,3.21321316421807,2.6968616189571,2.13678724400706,1.14020871547503,2.14461159864296,1.32745138339963,0.485561272309963,1.51161778482376,0.754420319023592,1.18120757152309,0.307435147943927,1.55056975900933,1.09060118843252,0.712994756769443,0.948110273807448,1.05418608574999,0,2.04263763452273,0.900305470156551,1.68166288917581,0.857348140126369,1.77340233642274,1.96205699362278,0.658196082408484,0.608929898229199,0.23467170806371,0.63549621259146,0.882113592219848,1.15420377059036,1.45317984026315,0.965006798850494,0.358117032009409,0.984845398470368,2.04036585640896,0.927126510052548,0.683483523191411,1.857481811669,0.925972636848558,0.753473828018764,0.956859594047176,0.228778173206523,1.86976272993241,2.09927178485487,1.65839968565309,0,2.05618395827738,1.42323626988794,1.08005340821801,2.09088296014469,0.87345025498471,0.809186078308924,1.07449492442937,0,1.16653475962614,0,0,1.34564891439581,0.992750942742586,1.55560950675238,1.29159823477731,1.8585173803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| |||
|short_description=p5@Pogz | |||
}} | |||
Revision as of 03:02, 14 September 2013
| Short description: | p5@Pogz |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Pogz_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -3bp_to_ENSMUST00000107265_5end |
| EntrezGene: | Pogz |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.56e-07 | 23 |
| neuroblast (sensu Vertebrata) | 1.56e-07 | 23 |
| neuron | 2.49e-07 | 33 |
| neuronal stem cell | 2.49e-07 | 33 |
| neuroblast | 2.49e-07 | 33 |
| electrically signaling cell | 2.49e-07 | 33 |
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 5.51e-08 | 64 |
| neural plate | 5.51e-08 | 64 |
| presumptive neural plate | 5.51e-08 | 64 |
| ecto-epithelium | 5.48e-07 | 73 |
| pre-chordal neural plate | 6.19e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
