FFCP PHASE1:Mm9::chr4:128813928..128813948,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=384061|HGNC=|UniProt=Q8K4Z2|association_with_transcript=-294bp_to_ENSMUST00000102600_5end|description=CAGE_peak_5_at_Fndc5_5end|id=chr4:128813928..128813948,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004733,8.15e-10,6;UBERON:0004732,8.15e-10,6;UBERON:0002028,8.15e-10,6;UBERON:0007277,8.15e-10,6;UBERON:0002950,1.35e-08,4;UBERON:0001891,1.35e-08,4;UBERON:0009616,1.35e-08,4;UBERON:0010286,1.35e-08,4;UBERON:0010314,9.44e-08,92;UBERON:0001896,1.12e-07,2;UBERON:0002298,1.12e-07,2;UBERON:0005290,1.12e-07,2;UBERON:0010096,1.12e-07,2;UBERON:0003076,2.26e-07,12;UBERON:0003057,2.26e-07,12;UBERON:0000073,4.72e-07,54;UBERON:0000955,6.28e-07,47;UBERON:0006238,6.28e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0,0,0,3.30347642998166,1.14918604276669,0.768032666281217,0,0.0914876436024097,0.52091337055676,2.51264699101243,2.25105044012672,0.763991238884051,0.883885756421003,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.376999773989026,0.247194967734374,0,0,0.323533699894818,0.662524555381181,0.484875253135222,0,3.80615036115011,3.14170060220183,0,0,0,0,1.79748767285787,0,0.125654352112864,0.521472960576829,0.255715457330331,0.62336413367868,1.46017136760982,0.203678727700633,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0,0,0,0,0,0,0,0.696504333044333,0,0.59710280045548,0,0,0,0,0,0,0.473489471170421,0,0,0.465067889500816,0.268273401399619,0.350296027101508,1.31647879930784,2.29834449710733,2.43206428637567,2.48539978623065,1.53685080703735,2.95254121272818,0.841159794256509,0,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,1.76605648986571,1.52375192569864,0,0.757412781613119,0,0,0,0,0,0,0,0,0,1.28528526568723,0.567760340833074,0.35613120733451,0.81443479676788,0.824850614862677,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,1.86401793926078,0,0,0.496375471371293,0.972255941720238,0.645799117388655,0.675824501963113,0.704143431874524,1.17183946359555,7.13043542094834,2.17425708743405,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0,0.453142408984205,1.03552062350364,0.103787347584177,0.399024873401031,0,0.486213434136588,0,0,0,0.618105171716683,0.962757628775446,0,0.25347929989024,0.565879024158229,0.842773567228942,0.768301828858431,0.689225627467359,0,0.927074607558844,0.192909220463705,0.412085900803307,0.735994600671987,0,0.354951612318675,0.238436189947321,0.581385666529314,0.188218760830661,0.761531471025089,0.365855945745545,0,0.271608227691724,0.561142271657738,0.711810108745045,0.591026894253381,1.22769312950907,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843|short_description=p5@Fndc5}} | ||
|EntrezGene=384061 | |||
|HGNC= | |||
|UniProt=Q8K4Z2 | |||
|association_with_transcript=-294bp_to_ENSMUST00000102600_5end | |||
|description=CAGE_peak_5_at_Fndc5_5end | |||
|id=chr4:128813928..128813948,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,8.15e-10,6;UBERON:0004732,8.15e-10,6;UBERON:0002028,8.15e-10,6;UBERON:0007277,8.15e-10,6;UBERON:0002950,1.35e-08,4;UBERON:0001891,1.35e-08,4;UBERON:0009616,1.35e-08,4;UBERON:0010286,1.35e-08,4;UBERON:0010314,9.44e-08,92;UBERON:0001896,1.12e-07,2;UBERON:0002298,1.12e-07,2;UBERON:0005290,1.12e-07,2;UBERON:0010096,1.12e-07,2;UBERON:0003076,2.26e-07,12;UBERON:0003057,2.26e-07,12;UBERON:0000073,4.72e-07,54;UBERON:0000955,6.28e-07,47;UBERON:0006238,6.28e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0,0,0,3.30347642998166,1.14918604276669,0.768032666281217,0,0.0914876436024097,0.52091337055676,2.51264699101243,2.25105044012672,0.763991238884051,0.883885756421003,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.376999773989026,0.247194967734374,0,0,0.323533699894818,0.662524555381181,0.484875253135222,0,3.80615036115011,3.14170060220183,0,0,0,0,1.79748767285787,0,0.125654352112864,0.521472960576829,0.255715457330331,0.62336413367868,1.46017136760982,0.203678727700633,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0,0,0,0,0,0,0,0.696504333044333,0,0.59710280045548,0,0,0,0,0,0,0.473489471170421,0,0,0.465067889500816,0.268273401399619,0.350296027101508,1.31647879930784,2.29834449710733,2.43206428637567,2.48539978623065,1.53685080703735,2.95254121272818,0.841159794256509,0,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.779856348476481,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,1.76605648986571,1.52375192569864,0,0.757412781613119,0,0,0,0,0,0,0,0,0,1.28528526568723,0.567760340833074,0.35613120733451,0.81443479676788,0.824850614862677,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,1.86401793926078,0,0,0.496375471371293,0.972255941720238,0.645799117388655,0.675824501963113,0.704143431874524,1.17183946359555,7.13043542094834,2.17425708743405,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0,0.453142408984205,1.03552062350364,0.103787347584177,0.399024873401031,0,0.486213434136588,0,0,0,0.618105171716683,0.962757628775446,0,0.25347929989024,0.565879024158229,0.842773567228942,0.768301828858431,0.689225627467359,0,0.927074607558844,0.192909220463705,0.412085900803307,0.735994600671987,0,0.354951612318675,0.238436189947321,0.581385666529314,0.188218760830661,0.761531471025089,0.365855945745545,0,0.271608227691724,0.561142271657738,0.711810108745045,0.591026894253381,1.22769312950907,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p5@Fndc5 | |||
}} |
Revision as of 03:50, 14 September 2013
Short description: | p5@Fndc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fndc5_5end |
Coexpression cluster: | NA |
Association with transcript: | -294bp_to_ENSMUST00000102600_5end |
EntrezGene: | Fndc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 8.15e-10 | 6 |
segmental subdivision of nervous system | 8.15e-10 | 6 |
hindbrain | 8.15e-10 | 6 |
presumptive hindbrain | 8.15e-10 | 6 |
regional part of midbrain | 1.35e-08 | 4 |
midbrain | 1.35e-08 | 4 |
presumptive midbrain | 1.35e-08 | 4 |
midbrain neural tube | 1.35e-08 | 4 |
structure with developmental contribution from neural crest | 9.44e-08 | 92 |
medulla oblongata | 1.12e-07 | 2 |
brainstem | 1.12e-07 | 2 |
myelencephalon | 1.12e-07 | 2 |
future myelencephalon | 1.12e-07 | 2 |
posterior neural tube | 2.26e-07 | 12 |
chordal neural plate | 2.26e-07 | 12 |
regional part of nervous system | 4.72e-07 | 54 |
brain | 6.28e-07 | 47 |
future brain | 6.28e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.