FFCP PHASE1:Mm9::chr4:142863932..142863937,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:142863932..142863937,-|id=chr4:142863932..142863937,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,3.61e-44,8;CL:0000128,3.41e-41,6;CL:0000126,3.41e-41,6;CL:0000127,3.41e-41,6;CL:0000333,2.20e-35,10;CL:0000095,2.20e-35,10;CL:0000243,2.20e-35,10;CL:0000123,2.20e-35,10;CL:0000125,2.20e-35,10;CL:0000030,2.20e-35,10;CL:0000339,2.20e-35,10;CL:0002605,4.07e-21,2;CL:0002604,4.07e-21,2;CL:0002603,2.50e-20,2;CL:0000219,9.32e-09,54;CL:0002319,3.02e-08,43;CL:0000221,4.68e-08,44;CL:0000133,4.68e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.13e-10,4;UBERON:0002680,1.13e-10,4;UBERON:0001895,1.13e-10,4;UBERON:0010092,1.13e-10,4;UBERON:0006215,1.13e-10,4;UBERON:0004733,2.04e-07,6;UBERON:0004732,2.04e-07,6;UBERON:0002028,2.04e-07,6;UBERON:0007277,2.04e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.912392380975631,0.550640256485045,2.34717403304412,1.52617609466313,4.83309602015838,10.6936444490856,2.65974201088189,0,0,0,0,0,0.573066879877513,1.54701627683233,0,0,0,0,0,0,0.988866362566974,1.4209602298922,0,1.92109152660777,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0,0,0.395658863190582,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0,0.569486723196412,0.372798891650601,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.988779870937496,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.248813941220186,0.505445516867349,0,0,0,0.360124259610698,0.150704817835715,0.0680364991513279,0.384341160854549,0.468508622798644,1.29351685369508,0.431135985865684,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.952174563544055,0.390267295715598,0,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0,0.646793418913773,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0.42366414172764,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0.299033092087958,0.330916980914195,0,0.645799117388655,0.168956125490778,0.352071715937262,0.39061315453185,0.419437377702843,0.483168241652012,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0,0,0.760437899670719,0.377252682772152,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr4:142863932..142863937,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:142863932..142863937,- | |||
|id=chr4:142863932..142863937,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.61e-44,8;CL:0000128,3.41e-41,6;CL:0000126,3.41e-41,6;CL:0000127,3.41e-41,6;CL:0000333,2.20e-35,10;CL:0000095,2.20e-35,10;CL:0000243,2.20e-35,10;CL:0000123,2.20e-35,10;CL:0000125,2.20e-35,10;CL:0000030,2.20e-35,10;CL:0000339,2.20e-35,10;CL:0002605,4.07e-21,2;CL:0002604,4.07e-21,2;CL:0002603,2.50e-20,2;CL:0000219,9.32e-09,54;CL:0002319,3.02e-08,43;CL:0000221,4.68e-08,44;CL:0000133,4.68e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.13e-10,4;UBERON:0002680,1.13e-10,4;UBERON:0001895,1.13e-10,4;UBERON:0010092,1.13e-10,4;UBERON:0006215,1.13e-10,4;UBERON:0004733,2.04e-07,6;UBERON:0004732,2.04e-07,6;UBERON:0002028,2.04e-07,6;UBERON:0007277,2.04e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.912392380975631,0.550640256485045,2.34717403304412,1.52617609466313,4.83309602015838,10.6936444490856,2.65974201088189,0,0,0,0,0,0.573066879877513,1.54701627683233,0,0,0,0,0,0,0.988866362566974,1.4209602298922,0,1.92109152660777,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0,0,0.395658863190582,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0,0.569486723196412,0.372798891650601,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.988779870937496,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.248813941220186,0.505445516867349,0,0,0,0.360124259610698,0.150704817835715,0.0680364991513279,0.384341160854549,0.468508622798644,1.29351685369508,0.431135985865684,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.952174563544055,0.390267295715598,0,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0,0.646793418913773,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0.42366414172764,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0.299033092087958,0.330916980914195,0,0.645799117388655,0.168956125490778,0.352071715937262,0.39061315453185,0.419437377702843,0.483168241652012,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0,0,0.760437899670719,0.377252682772152,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr4:142863932..142863937,- | |||
}} |
Revision as of 04:22, 14 September 2013
Short description: | p@chr4:142863932..142863937, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:142863932..142863937, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.61e-44 | 8 |
oligodendrocyte | 3.41e-41 | 6 |
macroglial cell | 3.41e-41 | 6 |
astrocyte | 3.41e-41 | 6 |
migratory neural crest cell | 2.20e-35 | 10 |
neuron associated cell | 2.20e-35 | 10 |
glial cell (sensu Vertebrata) | 2.20e-35 | 10 |
neuron associated cell (sensu Vertebrata) | 2.20e-35 | 10 |
glial cell | 2.20e-35 | 10 |
glioblast | 2.20e-35 | 10 |
glioblast (sensu Vertebrata) | 2.20e-35 | 10 |
astrocyte of the cerebral cortex | 4.07e-21 | 2 |
astrocyte of the hippocampus | 4.07e-21 | 2 |
astrocyte of the cerebellum | 2.50e-20 | 2 |
motile cell | 9.32e-09 | 54 |
neural cell | 3.02e-08 | 43 |
ectodermal cell | 4.68e-08 | 44 |
neurectodermal cell | 4.68e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.13e-10 | 4 |
regional part of metencephalon | 1.13e-10 | 4 |
metencephalon | 1.13e-10 | 4 |
future metencephalon | 1.13e-10 | 4 |
rhombic lip | 1.13e-10 | 4 |
segmental subdivision of hindbrain | 2.04e-07 | 6 |
segmental subdivision of nervous system | 2.04e-07 | 6 |
hindbrain | 2.04e-07 | 6 |
presumptive hindbrain | 2.04e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.