FFCP PHASE1:Mm9::chr4:62295400..62295422,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=50780|HGNC=|MCL_coexpression_id=118|UniProt=Q9DC04|association_with_transcript=0bp_to_ENSMUST00000142684,ENSMUST00000144489,uc008tfg.1,uc008tfh.2_5end|description=CAGE_peak_9_at_Rgs3_5end|id=chr4:62295400..62295422,+|ontology_enrichment_celltype=CL:0000838!6.67e-11!12;CL:0000084!2.18e-10!11;CL:0000827!2.18e-10!11;CL:0000542!1.15e-09!13;CL:0000051!1.15e-09!13;CL:0000791!1.27e-09!9;CL:0000789!1.27e-09!9;CL:0002420!1.27e-09!9;CL:0002419!1.27e-09!9;CL:0000790!1.27e-09!9;CL:0000624!1.06e-08!8;CL:0002031!1.89e-08!25;CL:0000738!3.21e-07!17;CL:0002087!3.21e-07!17;CL:0000893!6.43e-07!6;CL:0002489!6.43e-07!6;CL:0000898!6.43e-07!6;CL:0000809!6.43e-07!6;CL:0000810!6.43e-07!6;CL:0000895!6.43e-07!6;CL:0000808!6.43e-07!6;CL:0000894!6.43e-07!6;CL:0000806!6.43e-07!6;CL:0000807!6.43e-07!6;CL:0000805!6.43e-07!6;CL:0002425!6.43e-07!6;CL:0002436!6.43e-07!6;CL:0002427!6.43e-07!6;CL:0002428!6.43e-07!6;CL:0002429!6.43e-07!6;CL:0002433!6.43e-07!6;CL:0002431!6.43e-07!6;CL:0002432!6.43e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.54e-20,9;CL:0000789,1.54e-20,9;CL:0002420,1.54e-20,9;CL:0002419,1.54e-20,9;CL:0000790,1.54e-20,9;CL:0000084,5.38e-20,11;CL:0000827,5.38e-20,11;CL:0000624,2.27e-18,8;CL:0000838,3.98e-18,12;CL:0000542,1.51e-16,13;CL:0000051,1.51e-16,13;CL:0002031,5.34e-15,25;CL:0000893,3.50e-14,6;CL:0002489,3.50e-14,6;CL:0000898,3.50e-14,6;CL:0000809,3.50e-14,6;CL:0000810,3.50e-14,6;CL:0000895,3.50e-14,6;CL:0000808,3.50e-14,6;CL:0000894,3.50e-14,6;CL:0000806,3.50e-14,6;CL:0000807,3.50e-14,6;CL:0000805,3.50e-14,6;CL:0002425,3.50e-14,6;CL:0002436,3.50e-14,6;CL:0002427,3.50e-14,6;CL:0002428,3.50e-14,6;CL:0002429,3.50e-14,6;CL:0002433,3.50e-14,6;CL:0002431,3.50e-14,6;CL:0002432,3.50e-14,6;CL:0000738,4.33e-12,17;CL:0002087,4.33e-12,17;CL:0000988,6.19e-11,32;CL:0002032,6.19e-11,32;CL:0000037,6.19e-11,32;CL:0000837,6.19e-11,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.70e-16!29;UBERON:0002193!8.22e-15!48;UBERON:0003408!3.54e-13!24;UBERON:0002390!6.24e-13!45;UBERON:0003061!6.24e-13!45;UBERON:0002370!1.48e-12!23;UBERON:0000974!1.48e-12!23;UBERON:0004807!1.48e-12!23;UBERON:0005058!1.48e-12!23;UBERON:0003351!1.48e-12!23;UBERON:0009113!1.48e-12!23;UBERON:0003295!1.48e-12!23;UBERON:0009722!1.48e-12!23;UBERON:0005562!1.48e-12!23;UBERON:0007690!1.48e-12!23;UBERON:0006562!1.12e-11!24;UBERON:0001557!1.12e-11!24;UBERON:0001042!1.12e-11!24;UBERON:0008814!1.12e-11!24;UBERON:0009145!1.12e-11!24;UBERON:0004119!3.43e-11!130;UBERON:0000925!3.43e-11!130;UBERON:0006595!3.43e-11!130;UBERON:0001007!4.13e-11!128;UBERON:0001555!4.13e-11!128;UBERON:0007026!4.13e-11!128;UBERON:0004921!2.99e-10!126;UBERON:0004185!2.99e-10!126;UBERON:0002405!3.11e-10!70;UBERON:0001004!9.89e-10!42;UBERON:0005057!1.73e-09!51;UBERON:0000072!1.83e-09!27;UBERON:0000065!3.31e-09!41;UBERON:0000063!1.75e-07!35;UBERON:0000077!2.97e-07!97;UBERON:0003081!3.69e-07!88;UBERON:0001041!5.49e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.19e-24,29;UBERON:0005057,1.19e-24,29;UBERON:0002193,7.10e-24,48;UBERON:0002405,7.10e-24,48;UBERON:0002390,1.42e-21,45;UBERON:0003061,1.42e-21,45;UBERON:0003408,1.61e-21,24;UBERON:0002370,3.91e-20,23;UBERON:0000974,3.91e-20,23;UBERON:0004807,3.91e-20,23;UBERON:0005058,3.91e-20,23;UBERON:0003351,3.91e-20,23;UBERON:0009113,3.91e-20,23;UBERON:0003295,3.91e-20,23;UBERON:0009722,3.91e-20,23;UBERON:0005562,3.91e-20,23;UBERON:0007690,3.91e-20,23;UBERON:0000077,1.57e-19,35;UBERON:0006562,4.00e-19,24;UBERON:0001557,4.00e-19,24;UBERON:0001042,4.00e-19,24;UBERON:0008814,4.00e-19,24;UBERON:0009145,4.00e-19,24;UBERON:0000072,1.52e-16,27;UBERON:0001004,5.73e-15,42;UBERON:0000065,6.96e-14,41;UBERON:0007811,6.51e-13,36;UBERON:0001007,1.31e-11,116;UBERON:0001555,1.31e-11,116;UBERON:0007026,1.31e-11,116;UBERON:0004119,2.79e-11,118;UBERON:0000925,2.79e-11,118;UBERON:0006595,2.79e-11,118;UBERON:0001041,3.57e-11,80;UBERON:0004921,5.29e-11,114;UBERON:0000153,3.91e-10,43;UBERON:0003081,2.87e-08,87;UBERON:0005911,3.58e-08,69;UBERON:0003929,4.45e-08,55;UBERON:0002368,5.03e-08,60;UBERON:0002530,5.94e-08,65;UBERON:0000949,9.61e-07,72|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,26.3411579820816,24.3564489322383,30.8965174745031,9.07455231595176,14.0398999831792,22.7696970808504,28.8487327982691,0.666219523631325,2.02475267389826,0,4.10100814965709,6.03303507865251,2.97072756258621,0.510259740906419,1.88652807281682,0.261199789138935,1.43993180514066,0.68822784320151,0,0,0,0.760093677825496,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,15.2326049822382,26.5514101322547,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.7127581957859,17.6077760880077,1.7813056687779,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.746441823660558,0,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0.324275238183423,0.292399974850665,0,0.134206418760372,0,0,8.26046957459495,0.793351699990633,0,0,0.128867461322093,0,0,0,0.949058123089023,0.329397909448022,0,0.596869416123452,0.58489226135736,2.69645822596266,0.216138049874694,1.39398891278057,0,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.608580364165509,0.241177159752417,0,0,0,0,0,1.86070473834252,1.24815069245824,0,0.179397413521912,0,2.03228509183265,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0.637819074629948,1.14704320301017,1.72684981865896,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.567760340833074,0,0,0.989820737835213,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.582961673259701,0,4.95525554313773,0.412773735926445,0.740778109478847,1.88368457004691,3.55404992074665,1.83022538565218,0.509935289981566,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0.90730481304255,1.24267862617385,0,0.448549638131936,0.165458490457098,0.583353565032143,0.387479470433193,0.675824501963113,0.352071715937262,0.5208175393758,0.209718688851422,0,0,4.74016680942267,0.405450430580328,0.718976700153791,1.16928740680016,0.716106782669926,1.58945083825012,1.08175904567972,1.47689527174577,1.81739609906666,0.990688486514998,1.51239277705261,3.8983152295901,5.8689223400601,6.42822961998629,0,0,0,0,0.19318959403219,0,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p9@Rgs3}} | ||
|EntrezGene=50780 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|UniProt=Q9DC04 | |||
|association_with_transcript=0bp_to_ENSMUST00000142684,ENSMUST00000144489,uc008tfg.1,uc008tfh.2_5end | |||
|description=CAGE_peak_9_at_Rgs3_5end | |||
|id=chr4:62295400..62295422,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.67e-11!12;CL:0000084!2.18e-10!11;CL:0000827!2.18e-10!11;CL:0000542!1.15e-09!13;CL:0000051!1.15e-09!13;CL:0000791!1.27e-09!9;CL:0000789!1.27e-09!9;CL:0002420!1.27e-09!9;CL:0002419!1.27e-09!9;CL:0000790!1.27e-09!9;CL:0000624!1.06e-08!8;CL:0002031!1.89e-08!25;CL:0000738!3.21e-07!17;CL:0002087!3.21e-07!17;CL:0000893!6.43e-07!6;CL:0002489!6.43e-07!6;CL:0000898!6.43e-07!6;CL:0000809!6.43e-07!6;CL:0000810!6.43e-07!6;CL:0000895!6.43e-07!6;CL:0000808!6.43e-07!6;CL:0000894!6.43e-07!6;CL:0000806!6.43e-07!6;CL:0000807!6.43e-07!6;CL:0000805!6.43e-07!6;CL:0002425!6.43e-07!6;CL:0002436!6.43e-07!6;CL:0002427!6.43e-07!6;CL:0002428!6.43e-07!6;CL:0002429!6.43e-07!6;CL:0002433!6.43e-07!6;CL:0002431!6.43e-07!6;CL:0002432!6.43e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.54e-20,9;CL:0000789,1.54e-20,9;CL:0002420,1.54e-20,9;CL:0002419,1.54e-20,9;CL:0000790,1.54e-20,9;CL:0000084,5.38e-20,11;CL:0000827,5.38e-20,11;CL:0000624,2.27e-18,8;CL:0000838,3.98e-18,12;CL:0000542,1.51e-16,13;CL:0000051,1.51e-16,13;CL:0002031,5.34e-15,25;CL:0000893,3.50e-14,6;CL:0002489,3.50e-14,6;CL:0000898,3.50e-14,6;CL:0000809,3.50e-14,6;CL:0000810,3.50e-14,6;CL:0000895,3.50e-14,6;CL:0000808,3.50e-14,6;CL:0000894,3.50e-14,6;CL:0000806,3.50e-14,6;CL:0000807,3.50e-14,6;CL:0000805,3.50e-14,6;CL:0002425,3.50e-14,6;CL:0002436,3.50e-14,6;CL:0002427,3.50e-14,6;CL:0002428,3.50e-14,6;CL:0002429,3.50e-14,6;CL:0002433,3.50e-14,6;CL:0002431,3.50e-14,6;CL:0002432,3.50e-14,6;CL:0000738,4.33e-12,17;CL:0002087,4.33e-12,17;CL:0000988,6.19e-11,32;CL:0002032,6.19e-11,32;CL:0000037,6.19e-11,32;CL:0000837,6.19e-11,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.70e-16!29;UBERON:0002193!8.22e-15!48;UBERON:0003408!3.54e-13!24;UBERON:0002390!6.24e-13!45;UBERON:0003061!6.24e-13!45;UBERON:0002370!1.48e-12!23;UBERON:0000974!1.48e-12!23;UBERON:0004807!1.48e-12!23;UBERON:0005058!1.48e-12!23;UBERON:0003351!1.48e-12!23;UBERON:0009113!1.48e-12!23;UBERON:0003295!1.48e-12!23;UBERON:0009722!1.48e-12!23;UBERON:0005562!1.48e-12!23;UBERON:0007690!1.48e-12!23;UBERON:0006562!1.12e-11!24;UBERON:0001557!1.12e-11!24;UBERON:0001042!1.12e-11!24;UBERON:0008814!1.12e-11!24;UBERON:0009145!1.12e-11!24;UBERON:0004119!3.43e-11!130;UBERON:0000925!3.43e-11!130;UBERON:0006595!3.43e-11!130;UBERON:0001007!4.13e-11!128;UBERON:0001555!4.13e-11!128;UBERON:0007026!4.13e-11!128;UBERON:0004921!2.99e-10!126;UBERON:0004185!2.99e-10!126;UBERON:0002405!3.11e-10!70;UBERON:0001004!9.89e-10!42;UBERON:0005057!1.73e-09!51;UBERON:0000072!1.83e-09!27;UBERON:0000065!3.31e-09!41;UBERON:0000063!1.75e-07!35;UBERON:0000077!2.97e-07!97;UBERON:0003081!3.69e-07!88;UBERON:0001041!5.49e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.19e-24,29;UBERON:0005057,1.19e-24,29;UBERON:0002193,7.10e-24,48;UBERON:0002405,7.10e-24,48;UBERON:0002390,1.42e-21,45;UBERON:0003061,1.42e-21,45;UBERON:0003408,1.61e-21,24;UBERON:0002370,3.91e-20,23;UBERON:0000974,3.91e-20,23;UBERON:0004807,3.91e-20,23;UBERON:0005058,3.91e-20,23;UBERON:0003351,3.91e-20,23;UBERON:0009113,3.91e-20,23;UBERON:0003295,3.91e-20,23;UBERON:0009722,3.91e-20,23;UBERON:0005562,3.91e-20,23;UBERON:0007690,3.91e-20,23;UBERON:0000077,1.57e-19,35;UBERON:0006562,4.00e-19,24;UBERON:0001557,4.00e-19,24;UBERON:0001042,4.00e-19,24;UBERON:0008814,4.00e-19,24;UBERON:0009145,4.00e-19,24;UBERON:0000072,1.52e-16,27;UBERON:0001004,5.73e-15,42;UBERON:0000065,6.96e-14,41;UBERON:0007811,6.51e-13,36;UBERON:0001007,1.31e-11,116;UBERON:0001555,1.31e-11,116;UBERON:0007026,1.31e-11,116;UBERON:0004119,2.79e-11,118;UBERON:0000925,2.79e-11,118;UBERON:0006595,2.79e-11,118;UBERON:0001041,3.57e-11,80;UBERON:0004921,5.29e-11,114;UBERON:0000153,3.91e-10,43;UBERON:0003081,2.87e-08,87;UBERON:0005911,3.58e-08,69;UBERON:0003929,4.45e-08,55;UBERON:0002368,5.03e-08,60;UBERON:0002530,5.94e-08,65;UBERON:0000949,9.61e-07,72 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,26.3411579820816,24.3564489322383,30.8965174745031,9.07455231595176,14.0398999831792,22.7696970808504,28.8487327982691,0.666219523631325,2.02475267389826,0,4.10100814965709,6.03303507865251,2.97072756258621,0.510259740906419,1.88652807281682,0.261199789138935,1.43993180514066,0.68822784320151,0,0,0,0.760093677825496,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,15.2326049822382,26.5514101322547,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.7127581957859,17.6077760880077,1.7813056687779,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.746441823660558,0,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0.324275238183423,0.292399974850665,0,0.134206418760372,0,0,8.26046957459495,0.793351699990633,0,0,0.128867461322093,0,0,0,0.949058123089023,0.329397909448022,0,0.596869416123452,0.58489226135736,2.69645822596266,0.216138049874694,1.39398891278057,0,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.608580364165509,0.241177159752417,0,0,0,0,0,1.86070473834252,1.24815069245824,0,0.179397413521912,0,2.03228509183265,0,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0.637819074629948,1.14704320301017,1.72684981865896,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.567760340833074,0,0,0.989820737835213,1.32745138339963,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.582961673259701,0,4.95525554313773,0.412773735926445,0.740778109478847,1.88368457004691,3.55404992074665,1.83022538565218,0.509935289981566,0.559805809294632,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0.90730481304255,1.24267862617385,0,0.448549638131936,0.165458490457098,0.583353565032143,0.387479470433193,0.675824501963113,0.352071715937262,0.5208175393758,0.209718688851422,0,0,4.74016680942267,0.405450430580328,0.718976700153791,1.16928740680016,0.716106782669926,1.58945083825012,1.08175904567972,1.47689527174577,1.81739609906666,0.990688486514998,1.51239277705261,3.8983152295901,5.8689223400601,6.42822961998629,0,0,0,0,0.19318959403219,0,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p9@Rgs3 | |||
}} |
Revision as of 05:21, 14 September 2013
Short description: | p9@Rgs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Rgs3_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 0bp_to_ENSMUST00000142684, ENSMUST00000144489, uc008tfg.1, uc008tfh.2_5end |
EntrezGene: | Rgs3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.