FFCP PHASE1:Mm9::chr4:82151653..82151706,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18028|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000107245,ENSMUST00000107246,ENSMUST00000135024,ENSMUST00000148982_5end|description=CAGE_peak_2_at_Nfib_5end|id=chr4:82151653..82151706,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!1.64e-10!17;UBERON:0000468!9.05e-10!333;UBERON:0002048!1.32e-08!14;UBERON:0000117!1.32e-08!14;UBERON:0000171!1.32e-08!14;UBERON:0000170!1.32e-08!14;UBERON:0005597!1.32e-08!14;UBERON:0000118!1.32e-08!14;UBERON:0005157!1.67e-07!27;UBERON:0000922!2.46e-07!328;UBERON:0004111!8.43e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0005153,1.61e-10,17;UBERON:0002048,1.30e-08,14;UBERON:0000117,1.30e-08,14;UBERON:0000171,1.30e-08,14;UBERON:0000170,1.30e-08,14;UBERON:0005597,1.30e-08,14;UBERON:0000118,1.30e-08,14;UBERON:0005157,1.41e-08,20;UBERON:0004111,8.37e-07,122|phase1_expression=14.2532473923267,36.2934423944936,25.0249581664245,11.4936400296595,13.023288978605,29.7146311284045,23.8284893407436,0,0,0,0,0,0,0,1.33243904726265,0.404950534779652,0,0,0,0,31.8912338066512,0.198581902401771,0,15.5192650109604,14.2233754261645,20.6723507081407,21.5380998079537,29.5195588779668,10.0712412311878,15.3738379153558,10.8647950221099,0,0,0,18.1976520443303,10.3065480122265,11.4334839506927,0,0,0,0,0,0,61.1858535361306,52.6146273029281,48.0892490663606,15.6478268869608,25.0728929837513,36.9072786993913,41.4135685028224,20.0180582924268,12.9377307928474,0,0,0,29.327575708098,42.6934825508747,37.6440627362533,15.9830004079082,20.6306481916093,13.3104594736298,7.11573517345177,11.5608323494448,0.449949858640699,0.988866362566974,2.1314403448383,10.1864037576258,17.6740420447915,174.509617515168,128.120635476774,146.806823023265,12.8542942981712,11.4851641294839,42.3818165283741,43.1304619582064,32.1726575313507,6.60695285996332,15.0671058940522,9.5236050618871,10.9465618816061,14.729510619988,22.3992749339407,7.2587579740359,5.6276261003168,18.9469827243245,17.3830865429464,14.6642831223076,29.8239113320481,5.83091688665517,12.9983083383671,60.5816781386507,26.673140186423,5.439770669662,33.4615978815447,31.8390444549358,36.2901778548842,39.4648820570223,14.9978683868691,13.5088722393492,6.36011234118612,10.2815696436977,46.1975318691544,84.0857291031931,49.7746692207332,8.44315059943735,10.1343946190039,5.56076889516262,36.5388415100992,43.760502336372,36.5167662099469,25.8493136881542,20.3991870469135,22.1390877365816,23.964899847867,34.4534911907615,40.3389758168258,6.67426412882809,120.306664957366,6.19227386364912,50.9565577334339,22.0841518460394,16.4857586065976,13.0474232852686,72.9024184558752,89.6431905161588,18.9038220854358,0,0,0,8.98743836428936,15.0975198930147,18.9738071690425,25.7259993884569,21.2243829584174,10.8049783170971,12.1680947300818,56.6226863007759,25.0058010926287,35.1284634222808,125.844229820111,8.84819012146385,8.73627996847197,19.9868964083938,24.866294942893,22.1118622241816,21.5231050078548,21.4576949241779,36.4771752742012,4.52692785158969,24.3946843416487,42.4042209235117,36.605687315405,61.1703948296315,71.7399463035663,74.4931333796755,32.4425854914144,0,0,0.284163499395593,17.8128164380532,25.7978665979206,33.3114813702878,59.659673367473,51.9457571813146,60.0099069131901,60.458825635106,49.8988526603292,59.7838552919908,82.1153651068267,70.75617701809,71.9891028767199,54.3863953222236,48.9596757099043,57.3061408106787,44.7917590441591,104.139467727836,11.5646574044329,25.9161555330273,23.2484193083405,26.9394539358109,35.1808169409315,33.4794650874749,29.3539017875229,20.3541419940438,20.404749646414,18.2815839743652,25.3848560888272,26.2622543094319,27.8798644580342,26.9645822596266,21.8299430373441,21.1089749649629,10.4317345524195,15.0808036644842,23.6686244913469,16.2921062276251,18.2315337937568,16.0611027548829,25.9269802209455,33.5075035913697,25.9047900938268,16.1650284737559,44.7643466901595,11.1786220829783,10.8107447312262,7.42044970870017,8.11440485554012,11.3353265083636,15.786802810448,12.9463261852865,14.9164408633033,18.1210532704134,204.150853268843,43.5404908772149,50.8621407176734,68.1962970457202,43.0553792452589,40.0428122731595,77.0420802994742,34.4874369422282,90.1196319724403,72.4811516260053,89.6516748462078,95.6460729992768,99.7402855312398,82.3463993959911,124.689398987997,114.054315169119,136.014917664837,75.704851398671,79.2624066764461,71.7459330564297,0,0,125.891653892873,120.032484642559,12.36239542906,11.0178985396671,30.819769730815,35.5984007358166,19.5615096038079,14.4462335389756,21.5423397732799,19.1175038362042,19.6062833192507,29.7230357328274,28.7415598189175,25.1340037803728,26.8795689003636,15.1021018718249,39.0335234322739,35.7911863371183,58.6393053672874,55.5949314417444,22.5666735177937,24.0352829793432,22.6742667723563,26.7819213253375,30.1207930738388,49.1896236710284,35.6631044572145,31.9909681940205,42.0666906493971,41.7168520475277,34.7881408297496,24.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| ||
|EntrezGene=18028 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000107245,ENSMUST00000107246,ENSMUST00000135024,ENSMUST00000148982_5end | |||
|description=CAGE_peak_2_at_Nfib_5end | |||
|id=chr4:82151653..82151706,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!1.64e-10!17;UBERON:0000468!9.05e-10!333;UBERON:0002048!1.32e-08!14;UBERON:0000117!1.32e-08!14;UBERON:0000171!1.32e-08!14;UBERON:0000170!1.32e-08!14;UBERON:0005597!1.32e-08!14;UBERON:0000118!1.32e-08!14;UBERON:0005157!1.67e-07!27;UBERON:0000922!2.46e-07!328;UBERON:0004111!8.43e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,1.61e-10,17;UBERON:0002048,1.30e-08,14;UBERON:0000117,1.30e-08,14;UBERON:0000171,1.30e-08,14;UBERON:0000170,1.30e-08,14;UBERON:0005597,1.30e-08,14;UBERON:0000118,1.30e-08,14;UBERON:0005157,1.41e-08,20;UBERON:0004111,8.37e-07,122 | |||
|phase1_expression=14.2532473923267,36.2934423944936,25.0249581664245,11.4936400296595,13.023288978605,29.7146311284045,23.8284893407436,0,0,0,0,0,0,0,1.33243904726265,0.404950534779652,0,0,0,0,31.8912338066512,0.198581902401771,0,15.5192650109604,14.2233754261645,20.6723507081407,21.5380998079537,29.5195588779668,10.0712412311878,15.3738379153558,10.8647950221099,0,0,0,18.1976520443303,10.3065480122265,11.4334839506927,0,0,0,0,0,0,61.1858535361306,52.6146273029281,48.0892490663606,15.6478268869608,25.0728929837513,36.9072786993913,41.4135685028224,20.0180582924268,12.9377307928474,0,0,0,29.327575708098,42.6934825508747,37.6440627362533,15.9830004079082,20.6306481916093,13.3104594736298,7.11573517345177,11.5608323494448,0.449949858640699,0.988866362566974,2.1314403448383,10.1864037576258,17.6740420447915,174.509617515168,128.120635476774,146.806823023265,12.8542942981712,11.4851641294839,42.3818165283741,43.1304619582064,32.1726575313507,6.60695285996332,15.0671058940522,9.5236050618871,10.9465618816061,14.729510619988,22.3992749339407,7.2587579740359,5.6276261003168,18.9469827243245,17.3830865429464,14.6642831223076,29.8239113320481,5.83091688665517,12.9983083383671,60.5816781386507,26.673140186423,5.439770669662,33.4615978815447,31.8390444549358,36.2901778548842,39.4648820570223,14.9978683868691,13.5088722393492,6.36011234118612,10.2815696436977,46.1975318691544,84.0857291031931,49.7746692207332,8.44315059943735,10.1343946190039,5.56076889516262,36.5388415100992,43.760502336372,36.5167662099469,25.8493136881542,20.3991870469135,22.1390877365816,23.964899847867,34.4534911907615,40.3389758168258,6.67426412882809,120.306664957366,6.19227386364912,50.9565577334339,22.0841518460394,16.4857586065976,13.0474232852686,72.9024184558752,89.6431905161588,18.9038220854358,0,0,0,8.98743836428936,15.0975198930147,18.9738071690425,25.7259993884569,21.2243829584174,10.8049783170971,12.1680947300818,56.6226863007759,25.0058010926287,35.1284634222808,125.844229820111,8.84819012146385,8.73627996847197,19.9868964083938,24.866294942893,22.1118622241816,21.5231050078548,21.4576949241779,36.4771752742012,4.52692785158969,24.3946843416487,42.4042209235117,36.605687315405,61.1703948296315,71.7399463035663,74.4931333796755,32.4425854914144,0,0,0.284163499395593,17.8128164380532,25.7978665979206,33.3114813702878,59.659673367473,51.9457571813146,60.0099069131901,60.458825635106,49.8988526603292,59.7838552919908,82.1153651068267,70.75617701809,71.9891028767199,54.3863953222236,48.9596757099043,57.3061408106787,44.7917590441591,104.139467727836,11.5646574044329,25.9161555330273,23.2484193083405,26.9394539358109,35.1808169409315,33.4794650874749,29.3539017875229,20.3541419940438,20.404749646414,18.2815839743652,25.3848560888272,26.2622543094319,27.8798644580342,26.9645822596266,21.8299430373441,21.1089749649629,10.4317345524195,15.0808036644842,23.6686244913469,16.2921062276251,18.2315337937568,16.0611027548829,25.9269802209455,33.5075035913697,25.9047900938268,16.1650284737559,44.7643466901595,11.1786220829783,10.8107447312262,7.42044970870017,8.11440485554012,11.3353265083636,15.786802810448,12.9463261852865,14.9164408633033,18.1210532704134,204.150853268843,43.5404908772149,50.8621407176734,68.1962970457202,43.0553792452589,40.0428122731595,77.0420802994742,34.4874369422282,90.1196319724403,72.4811516260053,89.6516748462078,95.6460729992768,99.7402855312398,82.3463993959911,124.689398987997,114.054315169119,136.014917664837,75.704851398671,79.2624066764461,71.7459330564297,0,0,125.891653892873,120.032484642559,12.36239542906,11.0178985396671,30.819769730815,35.5984007358166,19.5615096038079,14.4462335389756,21.5423397732799,19.1175038362042,19.6062833192507,29.7230357328274,28.7415598189175,25.1340037803728,26.8795689003636,15.1021018718249,39.0335234322739,35.7911863371183,58.6393053672874,55.5949314417444,22.5666735177937,24.0352829793432,22.6742667723563,26.7819213253375,30.1207930738388,49.1896236710284,35.6631044572145,31.9909681940205,42.0666906493971,41.7168520475277,34.7881408297496,24.7525303795648,12.2558258071364,10.6236045478473,8.66703181344455,17.1469628025274,28.3744373827638,27.825535545923,26.6569413375436,12.178597964584,3.52007562095566,4.66030555900404,108.499971843041,281.295947518165,63.294055264795,139.503795358825,95.4978752025092,107.01986663378,26.8162369699463,18.913380805072,3.93003025835061,40.0390523848652,23.8900940306928,5.46268525313604,4.64760374251486,4.34678529092393,0,0,0,16.2294005062569,21.6690155603078,43.1037270308919,34.6697144037982,34.4995688423873,33.4094722531652,33.85095094259,41.4920347741186,28.0078857922912,24.2380000055653,65.8619671872141,0.56369293868419,35.136388320335,20.351394326223,32.8622508301441,29.319279929445,37.0013914824804,37.3196018893498,43.3580601530354,17.3017918302423,5.55643477899814,7.4887801627045,6.00421129193539,24.1243006195295,25.0614735482178,12.7322406518239,17.0075360884107,14.7024202538136,6.49055427407832,8.71368210330006,8.07731599585181,4.49620159264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| |||
|short_description=p2@Nfib | |||
}} | |||
Revision as of 05:29, 14 September 2013
| Short description: | p2@Nfib |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Nfib_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000107245, ENSMUST00000107246, ENSMUST00000135024, ENSMUST00000148982_5end |
| EntrezGene: | Nfib |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial bud | 1.61e-10 | 17 |
| lung | 1.30e-08 | 14 |
| respiratory tube | 1.30e-08 | 14 |
| respiration organ | 1.30e-08 | 14 |
| pair of lungs | 1.30e-08 | 14 |
| lung primordium | 1.30e-08 | 14 |
| lung bud | 1.30e-08 | 14 |
| epithelial fold | 1.41e-08 | 20 |
| anatomical conduit | 8.37e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
