FFCP PHASE1:Mm9::chr5:115885425..115885444,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17690|HGNC=|MCL_coexpression_id=53|UniProt=|association_with_transcript=-62bp_to_ENSMUST00000130849_5end|description=CAGE_peak_4_at_Msi1_5end|id=chr5:115885425..115885444,+|ontology_enrichment_celltype=CL:0000117!1.26e-11!23;CL:0000337!1.26e-11!23;CL:0000221!1.37e-11!44;CL:0000133!1.37e-11!44;CL:0002319!4.55e-11!43;CL:0000540!2.84e-09!33;CL:0000047!2.84e-09!33;CL:0000031!2.84e-09!33;CL:0000404!2.84e-09!33;CL:0000055!2.25e-08!50;CL:0002609!9.22e-08!6;CL:0000393!6.84e-07!39;CL:0000211!6.84e-07!39|ontology_enrichment_celltype_v019_2=CL:0002609,5.50e-18,6;CL:0000117,1.36e-16,23;CL:0000337,1.36e-16,23;CL:0000540,7.56e-11,33;CL:0000047,7.56e-11,33;CL:0000031,7.56e-11,33;CL:0000404,7.56e-11,33;CL:0002319,9.55e-11,43;CL:0000221,1.94e-10,44;CL:0000133,1.94e-10,44;CL:0000120,5.27e-10,3;CL:0002608,9.82e-10,3;CL:0002613,4.93e-09,3;CL:0000393,8.06e-09,39;CL:0000211,8.06e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!3.62e-17!49;UBERON:0002346!7.91e-17!71;UBERON:0003075!7.91e-17!71;UBERON:0007284!7.91e-17!71;UBERON:0004121!1.13e-15!102;UBERON:0000924!1.13e-15!102;UBERON:0006601!1.13e-15!102;UBERON:0000033!1.29e-14!63;UBERON:0001017!6.00e-13!73;UBERON:0005743!6.00e-13!73;UBERON:0000073!2.86e-12!75;UBERON:0001016!2.86e-12!75;UBERON:0000970!2.48e-11!9;UBERON:0000019!2.48e-11!9;UBERON:0000047!2.48e-11!9;UBERON:0004088!2.48e-11!9;UBERON:0002104!2.48e-11!9;UBERON:0001456!2.48e-11!9;UBERON:0003072!2.48e-11!9;UBERON:0003071!2.48e-11!9;UBERON:0004128!2.48e-11!9;UBERON:0001049!7.25e-11!52;UBERON:0005068!7.25e-11!52;UBERON:0006241!7.25e-11!52;UBERON:0007135!7.25e-11!52;UBERON:0003080!2.31e-09!40;UBERON:0000020!2.81e-09!12;UBERON:0001032!2.81e-09!12;UBERON:0004456!2.81e-09!12;UBERON:0002780!7.41e-09!39;UBERON:0001890!7.41e-09!39;UBERON:0006240!7.41e-09!39;UBERON:0000153!8.62e-09!94;UBERON:0001444!9.92e-09!11;UBERON:0002616!1.11e-08!49;UBERON:0007811!1.13e-08!86;UBERON:0002020!1.42e-08!34;UBERON:0000955!2.39e-08!50;UBERON:0006238!2.39e-08!50;UBERON:0005085!2.57e-08!13;UBERON:0002791!4.51e-07!29;UBERON:0003528!4.51e-07!29;UBERON:0001893!4.51e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.21e-23,9;UBERON:0000019,7.21e-23,9;UBERON:0000047,7.21e-23,9;UBERON:0010312,7.21e-23,9;UBERON:0004088,7.21e-23,9;UBERON:0002104,7.21e-23,9;UBERON:0001456,7.21e-23,9;UBERON:0003072,7.21e-23,9;UBERON:0004128,7.21e-23,9;UBERON:0003071,7.21e-23,9;UBERON:0003056,2.81e-21,49;UBERON:0001444,1.83e-18,11;UBERON:0002346,5.23e-17,64;UBERON:0003075,5.23e-17,64;UBERON:0007284,5.23e-17,64;UBERON:0000020,8.24e-17,12;UBERON:0001032,8.24e-17,12;UBERON:0004456,8.24e-17,12;UBERON:0004121,1.74e-15,95;UBERON:0000924,1.74e-15,95;UBERON:0006601,1.74e-15,95;UBERON:0000033,2.06e-15,13;UBERON:0005085,2.06e-15,13;UBERON:0010371,2.28e-14,73;UBERON:0010314,1.72e-10,92;UBERON:0000369,4.01e-09,5;UBERON:0002435,4.01e-09,5;UBERON:0000204,4.01e-09,5;UBERON:0010082,4.01e-09,5;UBERON:0002780,1.55e-08,39;UBERON:0001890,1.55e-08,39;UBERON:0006240,1.55e-08,39;UBERON:0003528,2.00e-08,29;UBERON:0002791,2.00e-08,29;UBERON:0001893,2.00e-08,29;UBERON:0003080,2.89e-08,40;UBERON:0002616,3.64e-08,46;UBERON:0001017,3.64e-08,73;UBERON:0000955,6.13e-08,47;UBERON:0006238,6.13e-08,47;UBERON:0001016,7.42e-08,75;UBERON:0001049,6.14e-07,52;UBERON:0005068,6.14e-07,52;UBERON:0006241,6.14e-07,52;UBERON:0007135,6.14e-07,52;UBERON:0002020,6.24e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.219686182734472,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0,0,0,3.64169629547276,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0.768436610643109,4.66603255388149,4.3201900266141,2.73422449756797,0.571301968807607,0.220868540951614,4.16468717330844,5.55903731905771,1.83843757322004,0,0.255374676170375,0,2.37395317914349,2.19570344645783,1.04182674111352,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,1.25654352112864,0.521472960576829,0.255715457330331,0,0.324482526135515,0,0,0,0.420883711772948,6.63614259109789,8.04657365517155,17.2859644613135,13.1113191517072,24.289030197024,37.0248651623216,37.9491984466902,6.20888089773638,0,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0.566153061577665,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34079422240703,0.517434735131018,0,0.532020700926821,0.178368817602071,0,1.522324745573,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,2.90604573235695,2.79317411380722,1.36586884603307,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.962757628775446,0.758091635291392,0.760437899670719,0.188626341386076,0.0936415074698824,0.576226371643824,0.34461281373368,1.90517476513229,0.463537303779422,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.619747364743864,0.578719832943424,1.24905288968973,0.233931608445408,0.214871054048298,0,0,0|short_description=p4@Msi1}} | ||
|EntrezGene=17690 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|UniProt= | |||
|association_with_transcript=-62bp_to_ENSMUST00000130849_5end | |||
|description=CAGE_peak_4_at_Msi1_5end | |||
|id=chr5:115885425..115885444,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.26e-11!23;CL:0000337!1.26e-11!23;CL:0000221!1.37e-11!44;CL:0000133!1.37e-11!44;CL:0002319!4.55e-11!43;CL:0000540!2.84e-09!33;CL:0000047!2.84e-09!33;CL:0000031!2.84e-09!33;CL:0000404!2.84e-09!33;CL:0000055!2.25e-08!50;CL:0002609!9.22e-08!6;CL:0000393!6.84e-07!39;CL:0000211!6.84e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.50e-18,6;CL:0000117,1.36e-16,23;CL:0000337,1.36e-16,23;CL:0000540,7.56e-11,33;CL:0000047,7.56e-11,33;CL:0000031,7.56e-11,33;CL:0000404,7.56e-11,33;CL:0002319,9.55e-11,43;CL:0000221,1.94e-10,44;CL:0000133,1.94e-10,44;CL:0000120,5.27e-10,3;CL:0002608,9.82e-10,3;CL:0002613,4.93e-09,3;CL:0000393,8.06e-09,39;CL:0000211,8.06e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!3.62e-17!49;UBERON:0002346!7.91e-17!71;UBERON:0003075!7.91e-17!71;UBERON:0007284!7.91e-17!71;UBERON:0004121!1.13e-15!102;UBERON:0000924!1.13e-15!102;UBERON:0006601!1.13e-15!102;UBERON:0000033!1.29e-14!63;UBERON:0001017!6.00e-13!73;UBERON:0005743!6.00e-13!73;UBERON:0000073!2.86e-12!75;UBERON:0001016!2.86e-12!75;UBERON:0000970!2.48e-11!9;UBERON:0000019!2.48e-11!9;UBERON:0000047!2.48e-11!9;UBERON:0004088!2.48e-11!9;UBERON:0002104!2.48e-11!9;UBERON:0001456!2.48e-11!9;UBERON:0003072!2.48e-11!9;UBERON:0003071!2.48e-11!9;UBERON:0004128!2.48e-11!9;UBERON:0001049!7.25e-11!52;UBERON:0005068!7.25e-11!52;UBERON:0006241!7.25e-11!52;UBERON:0007135!7.25e-11!52;UBERON:0003080!2.31e-09!40;UBERON:0000020!2.81e-09!12;UBERON:0001032!2.81e-09!12;UBERON:0004456!2.81e-09!12;UBERON:0002780!7.41e-09!39;UBERON:0001890!7.41e-09!39;UBERON:0006240!7.41e-09!39;UBERON:0000153!8.62e-09!94;UBERON:0001444!9.92e-09!11;UBERON:0002616!1.11e-08!49;UBERON:0007811!1.13e-08!86;UBERON:0002020!1.42e-08!34;UBERON:0000955!2.39e-08!50;UBERON:0006238!2.39e-08!50;UBERON:0005085!2.57e-08!13;UBERON:0002791!4.51e-07!29;UBERON:0003528!4.51e-07!29;UBERON:0001893!4.51e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.21e-23,9;UBERON:0000019,7.21e-23,9;UBERON:0000047,7.21e-23,9;UBERON:0010312,7.21e-23,9;UBERON:0004088,7.21e-23,9;UBERON:0002104,7.21e-23,9;UBERON:0001456,7.21e-23,9;UBERON:0003072,7.21e-23,9;UBERON:0004128,7.21e-23,9;UBERON:0003071,7.21e-23,9;UBERON:0003056,2.81e-21,49;UBERON:0001444,1.83e-18,11;UBERON:0002346,5.23e-17,64;UBERON:0003075,5.23e-17,64;UBERON:0007284,5.23e-17,64;UBERON:0000020,8.24e-17,12;UBERON:0001032,8.24e-17,12;UBERON:0004456,8.24e-17,12;UBERON:0004121,1.74e-15,95;UBERON:0000924,1.74e-15,95;UBERON:0006601,1.74e-15,95;UBERON:0000033,2.06e-15,13;UBERON:0005085,2.06e-15,13;UBERON:0010371,2.28e-14,73;UBERON:0010314,1.72e-10,92;UBERON:0000369,4.01e-09,5;UBERON:0002435,4.01e-09,5;UBERON:0000204,4.01e-09,5;UBERON:0010082,4.01e-09,5;UBERON:0002780,1.55e-08,39;UBERON:0001890,1.55e-08,39;UBERON:0006240,1.55e-08,39;UBERON:0003528,2.00e-08,29;UBERON:0002791,2.00e-08,29;UBERON:0001893,2.00e-08,29;UBERON:0003080,2.89e-08,40;UBERON:0002616,3.64e-08,46;UBERON:0001017,3.64e-08,73;UBERON:0000955,6.13e-08,47;UBERON:0006238,6.13e-08,47;UBERON:0001016,7.42e-08,75;UBERON:0001049,6.14e-07,52;UBERON:0005068,6.14e-07,52;UBERON:0006241,6.14e-07,52;UBERON:0007135,6.14e-07,52;UBERON:0002020,6.24e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.219686182734472,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0,0,0,3.64169629547276,6.34789175126439,3.1691570175309,0,0,0,0,0,0,0.768436610643109,4.66603255388149,4.3201900266141,2.73422449756797,0.571301968807607,0.220868540951614,4.16468717330844,5.55903731905771,1.83843757322004,0,0.255374676170375,0,2.37395317914349,2.19570344645783,1.04182674111352,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,1.25654352112864,0.521472960576829,0.255715457330331,0,0.324482526135515,0,0,0,0.420883711772948,6.63614259109789,8.04657365517155,17.2859644613135,13.1113191517072,24.289030197024,37.0248651623216,37.9491984466902,6.20888089773638,0,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0.390438744296638,0,0,0,0.566153061577665,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34079422240703,0.517434735131018,0,0.532020700926821,0.178368817602071,0,1.522324745573,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,2.90604573235695,2.79317411380722,1.36586884603307,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.962757628775446,0.758091635291392,0.760437899670719,0.188626341386076,0.0936415074698824,0.576226371643824,0.34461281373368,1.90517476513229,0.463537303779422,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.619747364743864,0.578719832943424,1.24905288968973,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p4@Msi1 | |||
}} |
Revision as of 06:06, 14 September 2013
Short description: | p4@Msi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Msi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | -62bp_to_ENSMUST00000130849_5end |
EntrezGene: | Msi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.50e-18 | 6 |
CNS neuron (sensu Vertebrata) | 1.36e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-16 | 23 |
neuron | 7.56e-11 | 33 |
neuronal stem cell | 7.56e-11 | 33 |
neuroblast | 7.56e-11 | 33 |
electrically signaling cell | 7.56e-11 | 33 |
neural cell | 9.55e-11 | 43 |
ectodermal cell | 1.94e-10 | 44 |
neurectodermal cell | 1.94e-10 | 44 |
granule cell | 5.27e-10 | 3 |
hippocampal neuron | 9.82e-10 | 3 |
striatum neuron | 4.93e-09 | 3 |
electrically responsive cell | 8.06e-09 | 39 |
electrically active cell | 8.06e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.