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FFCP PHASE1:Mm9::chr5:121835581..121835599,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=231712|HGNC=|MCL_coexpression_id=247|UniProt=D3YX05|association_with_transcript=0bp_to_ENSMUST00000155379_5end|description=CAGE_peak_1_at_Trafd1_5end|id=chr5:121835581..121835599,-|ontology_enrichment_celltype=CL:0002319!7.71e-12!43;CL:0000055!9.10e-12!50;CL:0000221!2.00e-11!44;CL:0000133!2.00e-11!44;CL:0000393!7.88e-10!39;CL:0000211!7.88e-10!39;CL:0000540!3.26e-09!33;CL:0000047!3.26e-09!33;CL:0000031!3.26e-09!33;CL:0000404!3.26e-09!33;CL:0000117!1.63e-07!23;CL:0000337!1.63e-07!23;CL:0000144!5.42e-07!121;CL:0000012!5.42e-07!121;CL:0002321!8.25e-07!70;CL:0000220!8.25e-07!70;CL:0000723!9.49e-07!91;CL:0000048!9.49e-07!91|ontology_enrichment_celltype_v019_2=CL:0002319,7.71e-12,43;CL:0000221,2.00e-11,44;CL:0000133,2.00e-11,44;CL:0000393,7.88e-10,39;CL:0000211,7.88e-10,39;CL:0000540,3.26e-09,33;CL:0000047,3.26e-09,33;CL:0000031,3.26e-09,33;CL:0000404,3.26e-09,33;CL:0000117,1.63e-07,23;CL:0000337,1.63e-07,23;CL:0002321,8.25e-07,70;CL:0000723,9.49e-07,91;CL:0000048,9.49e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.92e-08!73;UBERON:0005743!3.92e-08!73;UBERON:0000073!2.34e-07!75;UBERON:0001016!2.34e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.92e-08,73;UBERON:0001016,2.34e-07,75|phase1_expression=16.4953312517938,12.2141392673776,13.1949779422965,12.0985684522732,12.0214975187123,7.89032577985882,7.2419918584613,5.55230290798778,4.36445038670167,1.87251621057595,0.171217968225505,0.398860794976682,7.01922992717943,3.4968160967599,8.66085380720723,10.7311891716608,12.5921138063066,14.1957974411207,10.9691546884591,9.76096199135469,11.5658874605455,12.2127869977089,13.0599894569468,7.35965144849671,8.71755268055246,14.3557991028755,8.61523992318149,13.3592164265251,5.70070258369122,10.3332353201572,10.8647950221099,4.44521471421742,3.07532393792285,0,4.91047753577167,3.15845826181135,3.26670970019791,26.7860243671621,37.5040965371424,24.0820922227947,28.8233429135197,26.6387739133794,19.4204141212461,14.7299277031425,16.2203089951223,12.2976323948327,35.2076104956618,30.3054967368821,23.726107735323,22.9427280907654,25.8974880006921,21.5628846547457,13.7581736967344,13.0565185562042,12.0993767691287,9.00408026125814,19.7708073557742,13.4074743992135,38.4401275633236,26.9785399428737,30.4239073682966,23.041428180701,24.0109594950008,54.4439328955246,67.2429126545543,58.9698495405263,25.7656095045828,20.3635701820424,31.3142629171603,27.1361936046698,31.3384192413559,17.9960120174396,13.2521124570968,25.6005770359254,27.8910320663068,22.9804696652505,11.0115880999389,10.0872997087298,9.98442466165583,37.7194782908354,46.8416735244337,30.2129754922921,10.0505879640497,6.75315132038016,13.5990440521361,17.3830865429464,16.7998583342941,24.9775257405903,5.98236927332154,8.76630097238712,17.102004833399,6.88339101585109,13.599426674155,4.31762553310254,7.14754059192436,5.37632264516803,7.3031098468511,10.3962496772615,12.4697282209377,8.83348936275851,9.57735254481427,15.3991772897181,12.7402619853323,14.2213340630666,6.061749148314,5.06719730950197,8.59391556525132,6.73684890342454,14.5005214842416,7.57054909230606,10.9295755862666,7.00270600117925,7.84092690670599,6.93324146542064,10.1126288136706,7.91699525376955,10.1349936771093,6.07317299063629,18.5768215909474,12.2942805960031,10.8212344045593,9.21262980956922,3.72783522436244,12.0040126774734,15.4990563041957,13.0283098156382,15.2165208122519,18.5969846607956,12.0716715719411,7.18995069143149,7.32000964509802,15.2041766056566,9.38651329038293,9.71718737855256,7.48036960414416,8.92326946872667,15.4795833052481,9.57933673697716,5.55990068554084,13.0473950649614,8.71806967850115,10.3455946995063,11.1638520479317,12.5084998803643,18.9821832632205,17.1672385181699,23.2380276908127,23.5420067372504,9.7005596819779,11.3463648100692,9.67731182901719,10.9597866213787,7.78532297831674,12.537077994798,6.99659263787008,9.35461054046918,16.1509033082044,15.9555702411123,14.4923384691752,13.6703009873431,11.9608290590359,14.9451511012642,14.4414288706978,15.7411385397923,13.7297730469767,16.7424440220294,11.8040296615832,22.5357110768637,16.785104691175,14.7750717671186,13.2142159559745,14.9123987173839,11.1970558798436,15.0311189011616,8.41159794256509,24.3883931338904,9.58214470653014,8.99131926656051,15.9966187901425,12.7730169523241,9.665059599157,8.87407508342707,9.78463392917429,9.13083005340284,12.8122846617018,10.8701310117847,16.8394589896181,21.089386036362,21.6410136702223,9.88701349519644,7.99710784536369,8.96135729644652,9.293727146701,7.88314737007129,3.38123207019241,6.31319116320474,5.62462212786115,11.5022744620122,9.35900749439008,6.34723636312289,6.12295038581362,6.54004968785543,5.92905254174298,3.67059232575407,5.70021085828289,6.07127703439105,4.05720242777006,8.68237775108701,9.42115651591253,10.64475708568,10.2145192868272,9.33508804839477,11.5014565221884,12.2806512730606,6.24075346229121,11.8712072635143,6.99649912735457,9.64887042726734,13.3022296919955,6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|EntrezGene=231712
|HGNC=
|MCL_coexpression_id=247
|UniProt=D3YX05
|association_with_transcript=0bp_to_ENSMUST00000155379_5end
|description=CAGE_peak_1_at_Trafd1_5end
|id=chr5:121835581..121835599,-
|ontology_enrichment_celltype=CL:0002319!7.71e-12!43;CL:0000055!9.10e-12!50;CL:0000221!2.00e-11!44;CL:0000133!2.00e-11!44;CL:0000393!7.88e-10!39;CL:0000211!7.88e-10!39;CL:0000540!3.26e-09!33;CL:0000047!3.26e-09!33;CL:0000031!3.26e-09!33;CL:0000404!3.26e-09!33;CL:0000117!1.63e-07!23;CL:0000337!1.63e-07!23;CL:0000144!5.42e-07!121;CL:0000012!5.42e-07!121;CL:0002321!8.25e-07!70;CL:0000220!8.25e-07!70;CL:0000723!9.49e-07!91;CL:0000048!9.49e-07!91
|ontology_enrichment_celltype_v019_2=CL:0002319,7.71e-12,43;CL:0000221,2.00e-11,44;CL:0000133,2.00e-11,44;CL:0000393,7.88e-10,39;CL:0000211,7.88e-10,39;CL:0000540,3.26e-09,33;CL:0000047,3.26e-09,33;CL:0000031,3.26e-09,33;CL:0000404,3.26e-09,33;CL:0000117,1.63e-07,23;CL:0000337,1.63e-07,23;CL:0002321,8.25e-07,70;CL:0000723,9.49e-07,91;CL:0000048,9.49e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.92e-08!73;UBERON:0005743!3.92e-08!73;UBERON:0000073!2.34e-07!75;UBERON:0001016!2.34e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.92e-08,73;UBERON:0001016,2.34e-07,75
|phase1_expression=16.4953312517938,12.2141392673776,13.1949779422965,12.0985684522732,12.0214975187123,7.89032577985882,7.2419918584613,5.55230290798778,4.36445038670167,1.87251621057595,0.171217968225505,0.398860794976682,7.01922992717943,3.4968160967599,8.66085380720723,10.7311891716608,12.5921138063066,14.1957974411207,10.9691546884591,9.76096199135469,11.5658874605455,12.2127869977089,13.0599894569468,7.35965144849671,8.71755268055246,14.3557991028755,8.61523992318149,13.3592164265251,5.70070258369122,10.3332353201572,10.8647950221099,4.44521471421742,3.07532393792285,0,4.91047753577167,3.15845826181135,3.26670970019791,26.7860243671621,37.5040965371424,24.0820922227947,28.8233429135197,26.6387739133794,19.4204141212461,14.7299277031425,16.2203089951223,12.2976323948327,35.2076104956618,30.3054967368821,23.726107735323,22.9427280907654,25.8974880006921,21.5628846547457,13.7581736967344,13.0565185562042,12.0993767691287,9.00408026125814,19.7708073557742,13.4074743992135,38.4401275633236,26.9785399428737,30.4239073682966,23.041428180701,24.0109594950008,54.4439328955246,67.2429126545543,58.9698495405263,25.7656095045828,20.3635701820424,31.3142629171603,27.1361936046698,31.3384192413559,17.9960120174396,13.2521124570968,25.6005770359254,27.8910320663068,22.9804696652505,11.0115880999389,10.0872997087298,9.98442466165583,37.7194782908354,46.8416735244337,30.2129754922921,10.0505879640497,6.75315132038016,13.5990440521361,17.3830865429464,16.7998583342941,24.9775257405903,5.98236927332154,8.76630097238712,17.102004833399,6.88339101585109,13.599426674155,4.31762553310254,7.14754059192436,5.37632264516803,7.3031098468511,10.3962496772615,12.4697282209377,8.83348936275851,9.57735254481427,15.3991772897181,12.7402619853323,14.2213340630666,6.061749148314,5.06719730950197,8.59391556525132,6.73684890342454,14.5005214842416,7.57054909230606,10.9295755862666,7.00270600117925,7.84092690670599,6.93324146542064,10.1126288136706,7.91699525376955,10.1349936771093,6.07317299063629,18.5768215909474,12.2942805960031,10.8212344045593,9.21262980956922,3.72783522436244,12.0040126774734,15.4990563041957,13.0283098156382,15.2165208122519,18.5969846607956,12.0716715719411,7.18995069143149,7.32000964509802,15.2041766056566,9.38651329038293,9.71718737855256,7.48036960414416,8.92326946872667,15.4795833052481,9.57933673697716,5.55990068554084,13.0473950649614,8.71806967850115,10.3455946995063,11.1638520479317,12.5084998803643,18.9821832632205,17.1672385181699,23.2380276908127,23.5420067372504,9.7005596819779,11.3463648100692,9.67731182901719,10.9597866213787,7.78532297831674,12.537077994798,6.99659263787008,9.35461054046918,16.1509033082044,15.9555702411123,14.4923384691752,13.6703009873431,11.9608290590359,14.9451511012642,14.4414288706978,15.7411385397923,13.7297730469767,16.7424440220294,11.8040296615832,22.5357110768637,16.785104691175,14.7750717671186,13.2142159559745,14.9123987173839,11.1970558798436,15.0311189011616,8.41159794256509,24.3883931338904,9.58214470653014,8.99131926656051,15.9966187901425,12.7730169523241,9.665059599157,8.87407508342707,9.78463392917429,9.13083005340284,12.8122846617018,10.8701310117847,16.8394589896181,21.089386036362,21.6410136702223,9.88701349519644,7.99710784536369,8.96135729644652,9.293727146701,7.88314737007129,3.38123207019241,6.31319116320474,5.62462212786115,11.5022744620122,9.35900749439008,6.34723636312289,6.12295038581362,6.54004968785543,5.92905254174298,3.67059232575407,5.70021085828289,6.07127703439105,4.05720242777006,8.68237775108701,9.42115651591253,10.64475708568,10.2145192868272,9.33508804839477,11.5014565221884,12.2806512730606,6.24075346229121,11.8712072635143,6.99649912735457,9.64887042726734,13.3022296919955,6.82169082373745,7.98528384565927,9.50572480341054,6.57132695207806,13.0654880804616,14.9967493758189,20.0987657293533,14.6600684018758,17.2742457926044,24.237124835938,14.4199716949849,20.3768278601757,16.7792907954553,63.3323392544944,71.7955502640697,7.86822836830458,9.3818493743609,6.42202359951168,7.85318300167761,4.42624352517024,7.57412781613119,12.304820557234,12.1036010731958,18.9572590004863,10.7535959078648,17.3782965784267,13.0215204162863,12.5491317519217,21.3346776275258,17.392662229647,17.0300297703558,7.80670468645477,12.2865266530406,16.9402437727719,12.5377293459127,3.98235415019888,8.01176099311439,9.37203026590728,6.03536255218874,4.42952839321159,9.22305443831782,10.0787034335606,8.36127577798263,11.7644134866958,8.53299246426703,3.16255825724996,6.18813259489121,16.6815406819356,7.74262704334634,11.2542054890996,10.502514716548,8.15765074754458,11.4156043265325,10.3665882979336,19.4857567433344,6.57080782578389,11.6507638975101,19.8475558249466,7.25499512942512,12.1098320021929,8.86599996443891,10.2660215842697,7.55048138827282,12.2421951384537,5.93360966433631,14.5240248678175,13.002372681683,13.3340059706192,11.3021074202815,8.74843057414561,11.8964650067392,18.5276488693302,17.4939315404573,18.2423965421839,5.72802370809068,9.64824780422463,10.5726122905961,9.82848601478391,12.9634743528971,10.0446779323242,12.2726555210187,14.8776220305605,12.3025292732494,7.64728342421578,9.32008969630389,10.7101658349996,7.92437694033088,7.77654905148359,10.8892665472667,7.8787492321416,7.26511339610346,10.7968659554094,12.6298253298632,6.29156066554265,18.8435614244285,10.9451402377989,4.74016680942267,12.5689633479902,15.6120654890537,13.7716072356463,11.2786818270513,10.1327490938445,11.1781768053571,9.00906115764921,7.67345019605922,8.61136915201498,8.87270429204197,9.25849867027648,7.02346443974405,11.3370595116122,9.9761368790693,4.21773311410723,5.20340368334959,5.37230772365051,12.7505132061246,11.0732660516197,13.1869169472431,12.4333659865858,5.517293144389,15.2482997506608,14.2700823317225,15.4681788628637,13.5764014051513,10.2762377965596,6.7985450765073,7.42524750254986,10.3573876741571,11.7817026335893,9.83744592328458,8.71813719707084,6.78342284781753,10.0732827394939,11.1829089851415,6.28839487883947,9.55986243940074,9.77885602327107,9.06554251851134,8.3438994493872,14.1510438587727,10.8996098952803,9.99719609346204,9.36415074698824,11.3324519756619,11.0276100394777,11.4310485907938,12.1678542242098,13.5036454324594,9.89006161927936,9.27353196846703,10.6289468239479,9.22874192028555,10.0143199777875,9.01147783120437,9.2227192807024,10.9998990259179,10.426894453748,7.62902163169744,11.9507620184358,10.661703161497,10.0839765405548,12.7070782264477,11.4584692087513,9.14127362997199,7.13754460630223,11.4912865851455,7.95367468714389,12.6773921888496,14.3466249051633,11.9119366324538,6.4922993973718
|short_description=p1@Trafd1
}}

Revision as of 06:16, 14 September 2013

Short description:p1@Trafd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trafd1_5end
Coexpression cluster:MCL_coexpression_mm9:247
Association with transcript: 0bp_to_ENSMUST00000155379_5end
EntrezGene:Trafd1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Trafd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.10
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.24
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.97
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.06
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.72
GP2+ M cell, pool1.CNhs13228.11845-124H914.36
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I213.36
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C110.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G826.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H137.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H226.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B735.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C322.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C338.44
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C730.42
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.04
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C754.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E767.24
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D258.97
Mouse Microglia, donor1.CNhs12629.11718-123C825.77
Mouse Microglia, donor2.CNhs12634.11736-123E820.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.25
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D437.72
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F446.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.98
Mouse Schwann, donor1.CNhs12507.11728-123D95.98
Mouse Schwann, donor2.CNhs12573.11746-123F98.77
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.59
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.74
accessory axillary lymph node, adult.CNhs10475.1063-29H914.50
adrenal gland, adult.CNhs10508.49-24D77.57
adrenal gland, embryo E14.CNhs11038.406-44C510.93
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F56.93
adrenal gland, neonate N00.CNhs11191.1311-23C110.11
adrenal gland, neonate N25.CNhs11223.1377-27I37.92
amnion, adult pregnant day17.5.CNhs10488.583-22A810.13
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I215.50
colon, adult.CNhs10468.36-18H713.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.07
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F115.20
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B28.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.58
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G413.05
eyeball, embryo E12.CNhs11016.345-16C68.72
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C911.16
eyeball, embryo E17.CNhs11023.1261-18D412.51
eyeball, neonate N00.CNhs11207.633-15C618.98
eyeball, neonate N01.CNhs11140.1532-43E717.17
eyeball, neonate N02.CNhs11205.1551-44G823.24
eyeball, neonate N16.CNhs11188.777-19A223.54
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H211.35
forelimb, embryo E13.CNhs10589.384-1E29.68
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C412.54
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I69.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.96
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.49
heart, embryo E11.CNhs10586.331-24E913.67
heart, embryo E12.CNhs11015.353-12F511.96
heart, embryo E13.CNhs11013.376-3I914.95
heart, embryo E14.CNhs10597.403-26D414.44
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C613.73
heart, embryo E17.CNhs11025.479-18E516.74
heart, embryo E18.CNhs11030.1283-20G311.80
heart, neonate N00.CNhs11213.639-21E322.54
heart, neonate N03.CNhs11221.1349-25I216.79
heart, neonate N10.CNhs11118.749-24G114.78
heart, neonate N16.CNhs11209.782-15G113.21
heart, neonate N20.CNhs11127.821-26I614.91
heart, neonate N25.CNhs11196.1351-25D311.20
heart, neonate N30.CNhs11202.1390-42D215.03
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G124.39
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I516.00
intestine, embryo E13.CNhs11010.381-16D512.77
intestine, embryo E15.CNhs10602.976-16D89.67
intestine, embryo E16.CNhs10585.463-22H48.87
intestine, embryo E17.CNhs10582.482-18D39.78
intestine, embryo E18.CNhs10526.1289-20F79.13
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B816.84
intestine, neonate N07.CNhs11095.720-20F221.09
intestine, neonate N10.CNhs11098.755-23A521.64
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G18.96
kidney, embryo E14.CNhs10606.411-4I99.29
kidney, embryo E15.CNhs10997.434-16F87.88
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G711.50
kidney, neonate N10.CNhs11206.758-6D59.36
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H16.54
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F58.68
liver, embryo E17.CNhs10510.481-18A39.42
liver, embryo E18.CNhs10579.499-43G410.64
liver, neonate N00.CNhs11117.641-24F410.21
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H212.28
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B113.30
lung, embryo E12.CNhs10522.354-16G26.82
lung, embryo E14.CNhs10604.404-26F87.99
lung, embryo E15.CNhs11020.432-17C59.51
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A613.07
lung, embryo E18.CNhs10583.1287-20I615.00
lung, neonate N00.CNhs11224.640-42C620.10
lung, neonate N06.CNhs11212.683-20E514.66
lung, neonate N07.CNhs11111.715-19A317.27
lung, neonate N10.CNhs11219.750-23E624.24
lung, neonate N20.CNhs11109.822-18A414.42
lung, neonate N25.CNhs11119.1359-25C720.38
lung, neonate N30.CNhs11133.1394-42H216.78
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A163.33
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A171.80
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A37.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.96
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.39
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H712.29
ovary, neonate N00.CNhs11217.1299-22I416.94
oviduct, adult pregnant day01.CNhs10500.988-6G612.54
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F29.37
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D811.76
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G816.68
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C711.25
pituitary gland, embryo E14.CNhs11037.398-44A510.50
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G311.65
prostate, adult.CNhs10470.859-1F819.85
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G412.11
skin, neonate N03.CNhs11215.662-22H38.87
skin, neonate N06.CNhs11097.693-20I510.27
skin, neonate N10.CNhs11108.762-6C47.55
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G214.52
spleen, embryo E16.CNhs11035.461-43C113.00
spleen, embryo E18.CNhs11011.1271-21F213.33
spleen, neonate N10.CNhs11116.752-24D111.30
spleen, neonate N20.CNhs11112.824-19H18.75
spleen, neonate N25.CNhs11099.1354-25G311.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.24
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D49.83
stomach, embryo E17.CNhs11006.1035-18D512.96
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B812.27
stomach, neonate N07.CNhs11210.718-18A914.88
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I17.65
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G510.71
testis, embryo E13.CNhs11031.389-23F57.92
testis, embryo E15.CNhs11034.443-27C57.78
testis, embryo E16.CNhs11033.470-26G510.89
testis, embryo E17.CNhs11029.486-18I57.88
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B710.80
testis, neonate N07.CNhs11222.726-26I412.63
testis, neonate N10.CNhs11204.763-44D96.29
testis, neonate N20.CNhs11110.839-18H318.84
testis, neonate N30.CNhs11130.1391-42E210.95
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I412.57
thymus, embryo E15.CNhs11005.430-45I215.61
thymus, embryo E16.CNhs11002.456-26C513.77
thymus, embryo E17.CNhs10581.478-18C111.28
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F811.18
thymus, neonate N03.CNhs11137.2104-43C79.01
thymus, neonate N06.CNhs11197.681-26C47.67
thymus, neonate N07.CNhs11211.713-19D38.61
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A29.26
thymus, neonate N25.CNhs11125.1362-25G77.02
thymus, neonate N30.CNhs11132.1393-42G211.34
tongue, adult.CNhs10499.32-1B49.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.20
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E412.75
uterus, adult pregnant day19.CNhs10497.590-15F511.07
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D512.43
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I88.72
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H210.07
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.14
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C614.35
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B46.49





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.92e-0873
nervous system2.34e-0775







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