FFCP PHASE1:Hg19::chr8:93115445..93115462,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=862|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1535|TSSclassifier=S|UniProt=Q7Z4J5,Q06455|association_with_transcript=0bp_to_ENST00000522316,ENST00000523629,NM_001198633,NM_175634_5end|coexpression_cluster_id=C10|description=CAGE_peak_7_at_RUNX1T1_5end|id=chr8:93115445..93115462,-|ontology_enrichment_celltype=CL:0002620!1.20e-09!23;CL:0000057!5.46e-08!75|ontology_enrichment_celltype_v019=CL:0002620;1.22e-11;23|ontology_enrichment_celltype_v019_2=CL:0002620,1.67e-11,23|ontology_enrichment_development_v019=UBERON:0006215;2.67e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;6.04e-08;5!DOID:450;6.04e-08;5!DOID:66;6.04e-08;5!DOID:423;6.04e-08;5!DOID:0080000;6.04e-08;5!DOID:11722;6.04e-08;5|ontology_enrichment_disease_v019_2=DOID:17,7.85e-08,5;DOID:450,7.85e-08,5;DOID:66,7.85e-08,5;DOID:423,7.85e-08,5;DOID:0080000,7.85e-08,5;DOID:11722,7.85e-08,5|ontology_enrichment_uberon=UBERON:0007023!6.20e-30!115;UBERON:0001049!2.33e-21!57;UBERON:0005068!2.33e-21!57;UBERON:0006241!2.33e-21!57;UBERON:0007135!2.33e-21!57;UBERON:0001017!3.80e-21!82;UBERON:0005743!4.35e-20!86;UBERON:0000073!4.90e-19!94;UBERON:0001016!4.90e-19!94;UBERON:0002616!1.87e-17!59;UBERON:0003080!2.14e-17!42;UBERON:0002780!7.02e-17!41;UBERON:0001890!7.02e-17!41;UBERON:0006240!7.02e-17!41;UBERON:0000955!2.05e-15!69;UBERON:0006238!2.05e-15!69;UBERON:0001950!6.74e-15!20;UBERON:0001893!7.15e-15!34;UBERON:0002020!8.47e-15!34;UBERON:0003528!8.47e-15!34;UBERON:0001869!1.79e-14!32;UBERON:0003075!1.87e-14!86;UBERON:0007284!1.87e-14!86;UBERON:0002619!1.91e-14!22;UBERON:0002791!3.01e-14!33;UBERON:0002346!5.44e-13!90;UBERON:0000956!1.13e-12!25;UBERON:0000203!1.13e-12!25;UBERON:0004121!1.88e-12!169;UBERON:0000924!1.40e-11!173;UBERON:0006601!1.40e-11!173;UBERON:0000475!4.23e-10!365;UBERON:0003056!4.65e-10!61;UBERON:0000153!1.44e-09!129;UBERON:0007811!1.44e-09!129;UBERON:0000033!7.10e-09!123;UBERON:0004111!3.49e-08!241;UBERON:0000468!5.16e-08!659;UBERON:0002097!2.33e-07!40;UBERON:0001871!3.37e-07!7;UBERON:0000477!3.69e-07!286;UBERON:0002199!9.47e-07!45;UBERON:0002416!9.47e-07!45|ontology_enrichment_uberon_v019=UBERON:0001950;2.18e-23;20!UBERON:0002619;5.74e-21;22!UBERON:0000956;4.85e-18;25!UBERON:0000203;4.85e-18;25!UBERON:0001869;3.35e-17;32!UBERON:0002791;1.39e-15;32!UBERON:0003528;2.87e-15;34!UBERON:0002020;2.87e-15;34!UBERON:0001893;3.15e-15;34!UBERON:0000200;5.98e-12;6!UBERON:0002780;1.98e-11;41!UBERON:0001890;1.98e-11;41!UBERON:0000073;1.31e-09;53!UBERON:0002616;1.31e-09;53!UBERON:0002097;2.72e-08;41!UBERON:0002021;5.37e-08;5!UBERON:0001871;7.19e-08;6!UBERON:0000922;3.22e-07;49!UBERON:0001017;4.30e-07;75!UBERON:0001870;8.53e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.53e-23,20;UBERON:0002619,4.18e-21,22;UBERON:0001869,4.00e-19,32;UBERON:0001049,9.84e-19,56;UBERON:0005068,9.84e-19,56;UBERON:0006241,9.84e-19,56;UBERON:0007135,9.84e-19,56;UBERON:0000073,2.37e-18,53;UBERON:0002616,2.37e-18,53;UBERON:0000956,3.68e-18,25;UBERON:0000203,3.68e-18,25;UBERON:0001893,9.90e-18,34;UBERON:0003528,1.07e-17,34;UBERON:0002020,1.07e-17,34;UBERON:0002780,2.20e-17,41;UBERON:0001890,2.20e-17,41;UBERON:0003080,2.20e-17,41;UBERON:0006240,2.20e-17,41;UBERON:0002791,3.94e-17,32;UBERON:0001017,6.56e-17,81;UBERON:0001016,7.44e-17,89;UBERON:0007023,7.62e-16,114;UBERON:0000955,1.32e-12,68;UBERON:0006238,1.32e-12,68;UBERON:0000200,5.98e-12,6;UBERON:0003075,7.27e-12,82;UBERON:0007284,7.27e-12,82;UBERON:0010371,1.03e-11,104;UBERON:0002346,5.34e-11,86;UBERON:0002097,3.14e-10,41;UBERON:0004121,3.78e-10,171;UBERON:0000924,3.78e-10,171;UBERON:0006601,3.78e-10,171;UBERON:0003056,5.48e-10,61;UBERON:0010314,4.70e-09,132;UBERON:0002199,1.10e-08,46;UBERON:0002416,1.10e-08,46;UBERON:0002021,7.06e-08,5;UBERON:0001871,7.56e-08,6;UBERON:0001870,2.83e-07,3|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,0,1.69669483739752,1.34717623575702,0.788280363383256,1.53316637465883,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.622422070799533,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0.352303495931295,0.323745888736263,0.702254033511242,0.204154171254893,0.122834317311768,0.516628905878827,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,2.51145489964407,3.41691822109708,0.211931901159562,4.50136644126603,1.23663035086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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z4J5,Q06455 | |||
|association_with_transcript=0bp_to_ENST00000522316,ENST00000523629,NM_001198633,NM_175634_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_7_at_RUNX1T1_5end | |||
|id=chr8:93115445..93115462,- | |||
|ontology_enrichment_celltype=CL:0002620!1.20e-09!23;CL:0000057!5.46e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.22e-11;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.67e-11,23 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.67e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.04e-08;5!DOID:450;6.04e-08;5!DOID:66;6.04e-08;5!DOID:423;6.04e-08;5!DOID:0080000;6.04e-08;5!DOID:11722;6.04e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.85e-08,5;DOID:450,7.85e-08,5;DOID:66,7.85e-08,5;DOID:423,7.85e-08,5;DOID:0080000,7.85e-08,5;DOID:11722,7.85e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.20e-30!115;UBERON:0001049!2.33e-21!57;UBERON:0005068!2.33e-21!57;UBERON:0006241!2.33e-21!57;UBERON:0007135!2.33e-21!57;UBERON:0001017!3.80e-21!82;UBERON:0005743!4.35e-20!86;UBERON:0000073!4.90e-19!94;UBERON:0001016!4.90e-19!94;UBERON:0002616!1.87e-17!59;UBERON:0003080!2.14e-17!42;UBERON:0002780!7.02e-17!41;UBERON:0001890!7.02e-17!41;UBERON:0006240!7.02e-17!41;UBERON:0000955!2.05e-15!69;UBERON:0006238!2.05e-15!69;UBERON:0001950!6.74e-15!20;UBERON:0001893!7.15e-15!34;UBERON:0002020!8.47e-15!34;UBERON:0003528!8.47e-15!34;UBERON:0001869!1.79e-14!32;UBERON:0003075!1.87e-14!86;UBERON:0007284!1.87e-14!86;UBERON:0002619!1.91e-14!22;UBERON:0002791!3.01e-14!33;UBERON:0002346!5.44e-13!90;UBERON:0000956!1.13e-12!25;UBERON:0000203!1.13e-12!25;UBERON:0004121!1.88e-12!169;UBERON:0000924!1.40e-11!173;UBERON:0006601!1.40e-11!173;UBERON:0000475!4.23e-10!365;UBERON:0003056!4.65e-10!61;UBERON:0000153!1.44e-09!129;UBERON:0007811!1.44e-09!129;UBERON:0000033!7.10e-09!123;UBERON:0004111!3.49e-08!241;UBERON:0000468!5.16e-08!659;UBERON:0002097!2.33e-07!40;UBERON:0001871!3.37e-07!7;UBERON:0000477!3.69e-07!286;UBERON:0002199!9.47e-07!45;UBERON:0002416!9.47e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.18e-23;20!UBERON:0002619;5.74e-21;22!UBERON:0000956;4.85e-18;25!UBERON:0000203;4.85e-18;25!UBERON:0001869;3.35e-17;32!UBERON:0002791;1.39e-15;32!UBERON:0003528;2.87e-15;34!UBERON:0002020;2.87e-15;34!UBERON:0001893;3.15e-15;34!UBERON:0000200;5.98e-12;6!UBERON:0002780;1.98e-11;41!UBERON:0001890;1.98e-11;41!UBERON:0000073;1.31e-09;53!UBERON:0002616;1.31e-09;53!UBERON:0002097;2.72e-08;41!UBERON:0002021;5.37e-08;5!UBERON:0001871;7.19e-08;6!UBERON:0000922;3.22e-07;49!UBERON:0001017;4.30e-07;75!UBERON:0001870;8.53e-07;3 | |||
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| |||
|short_description=p7@RUNX1T1 | |||
}} |
Revision as of 06:22, 14 September 2013
Short description: | p7@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000522316, ENST00000523629, NM_001198633, NM_175634_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | Q7Z4J5Q06455 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.67e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.85e-08 | 5 |
myotonic disease | 7.85e-08 | 5 |
muscle tissue disease | 7.85e-08 | 5 |
myopathy | 7.85e-08 | 5 |
muscular disease | 7.85e-08 | 5 |
myotonic dystrophy | 7.85e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.