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FFCP PHASE1:Mm9::chr5:23181745..23181756,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20817|HGNC=|MCL_coexpression_id=797|UniProt=E9Q5S4,O08551|association_with_transcript=29bp_to_ENSMUST00000171956,uc008wqh.1,uc008wqj.1_5end|description=CAGE_peak_5_at_Srpk2_5end|id=chr5:23181745..23181756,-|ontology_enrichment_celltype=CL:0000540!5.22e-13!33;CL:0000047!5.22e-13!33;CL:0000031!5.22e-13!33;CL:0000404!5.22e-13!33;CL:0000393!5.55e-11!39;CL:0000211!5.55e-11!39;CL:0000221!8.19e-11!44;CL:0000133!8.19e-11!44;CL:0002319!1.91e-10!43;CL:0000055!1.52e-08!50;CL:0000117!1.69e-07!23;CL:0000337!1.69e-07!23;CL:0000107!8.09e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,4.74e-23,33;CL:0000047,4.74e-23,33;CL:0000031,4.74e-23,33;CL:0000404,4.74e-23,33;CL:0000393,2.86e-21,39;CL:0000211,2.86e-21,39;CL:0000221,4.47e-18,44;CL:0000133,4.47e-18,44;CL:0002319,2.48e-17,43;CL:0000107,1.11e-12,9;CL:0000117,7.71e-12,23;CL:0000337,7.71e-12,23;CL:0002321,5.05e-11,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.69e-20!102;UBERON:0000924!3.69e-20!102;UBERON:0006601!3.69e-20!102;UBERON:0000073!9.46e-18!75;UBERON:0001016!9.46e-18!75;UBERON:0001017!4.99e-17!73;UBERON:0005743!4.99e-17!73;UBERON:0002346!1.21e-13!71;UBERON:0003075!1.21e-13!71;UBERON:0007284!1.21e-13!71;UBERON:0000033!1.85e-12!63;UBERON:0001049!3.25e-11!52;UBERON:0005068!3.25e-11!52;UBERON:0006241!3.25e-11!52;UBERON:0007135!3.25e-11!52;UBERON:0000153!9.50e-11!94;UBERON:0002020!2.55e-10!34;UBERON:0007811!2.64e-10!86;UBERON:0000955!3.42e-10!50;UBERON:0006238!3.42e-10!50;UBERON:0002616!1.12e-09!49;UBERON:0003056!8.59e-09!49;UBERON:0003080!1.35e-07!40;UBERON:0002791!1.58e-07!29;UBERON:0003528!1.58e-07!29;UBERON:0001893!1.58e-07!29;UBERON:0000010!2.62e-07!11;UBERON:0002780!3.33e-07!39;UBERON:0001890!3.33e-07!39;UBERON:0006240!3.33e-07!39;UBERON:0002410!8.09e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.29e-25,75;UBERON:0001017,7.13e-25,73;UBERON:0004121,6.43e-23,95;UBERON:0000924,6.43e-23,95;UBERON:0006601,6.43e-23,95;UBERON:0000073,4.51e-14,54;UBERON:0002346,3.13e-13,64;UBERON:0003075,3.13e-13,64;UBERON:0007284,3.13e-13,64;UBERON:0010371,4.10e-13,73;UBERON:0002020,6.27e-13,34;UBERON:0002410,1.11e-12,9;UBERON:0000010,3.04e-12,11;UBERON:0001049,4.36e-12,52;UBERON:0005068,4.36e-12,52;UBERON:0006241,4.36e-12,52;UBERON:0007135,4.36e-12,52;UBERON:0002240,5.57e-09,6;UBERON:0005174,5.57e-09,6;UBERON:0001137,5.57e-09,6;UBERON:0010314,1.90e-08,92;UBERON:0003076,2.10e-08,12;UBERON:0003057,2.10e-08,12;UBERON:0001948,4.21e-08,5;UBERON:0002315,4.21e-08,5;UBERON:0003528,4.79e-08,29;UBERON:0002791,4.79e-08,29;UBERON:0001893,4.79e-08,29;UBERON:0000955,4.90e-08,47;UBERON:0006238,4.90e-08,47;UBERON:0002616,2.68e-07,46|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0,0.129123323441576,0.84473233291,1.17032263160997,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,1.7008658030214,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,1.28482726513177,0,0.65407546914134,0.439372365468944,0.58328969722285,0,0,0,0.725362142011344,1.00828139742739,1.02903774414379,0,0,1.01158230429799,1.05798195854407,0,0,0,0,0,0.7104801149461,0,0.768436610643109,1.24427534770173,0.945041568321835,2.10324961351382,3.99911378165325,1.98781686856452,1.34739879136449,0.479227355091182,0,2.20231761998777,2.80912143787413,2.61131106535614,1.31886287730194,0.457438218012048,0.52091337055676,1.95428099300967,0.56276261003168,1.83357897332172,3.53554302568401,3.27454865837937,2.23679334990361,0.681535739998656,1.81371744256285,0,0,0.679971333707751,0,0,0,0.280888840263504,0.340860645156116,0,0,1.12674735821344,0,0,7.11066703153331,0.216491041011214,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,0.608930956624282,0.691846491768175,0.150722640552623,0.23517741427141,0.502666365318702,0,0.144599356919912,0,0.647067399789637,0,0,0,0.292780797011547,1.25668024088073,0.510914110417183,0.239630249011841,0,0,1.49790639404823,0.457500602818626,1.7591609295801,0.695297280769106,2.04572365864264,1.0389402227978,0.973447578406546,0.203678727700633,0.124406970610093,0.252722758433675,1.05220927943237,0.520481771850815,0.689706313300419,0.720248519221397,0.90422890701429,0.612328492361951,1.2811372028485,0.468508622798644,0.258703370739016,0.862271971731369,0.378212160335639,1.93546236580344,0.43839146485515,0.834141747676794,0.348252166522167,0.61734640922383,0.995171334092466,0,0,0,0.828503090142008,0,0.540186184383045,0.946978942340841,0,0.617068451549513,0.697601834251224,0.804820204198858,0.583826711835847,0.493679549740441,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,1.26173969138476,1.54356918568927,0.330418782983798,0,0.426576501070468,1.62565670302307,0.257734922644187,0,0,0.570676878337677,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0.571242563048644,1.1270773567308,0.203651327845314,0.193952487167626,0.631222379012867,0.44265575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|EntrezGene=20817
|HGNC=
|MCL_coexpression_id=797
|UniProt=E9Q5S4,O08551
|association_with_transcript=29bp_to_ENSMUST00000171956,uc008wqh.1,uc008wqj.1_5end
|description=CAGE_peak_5_at_Srpk2_5end
|id=chr5:23181745..23181756,-
|ontology_enrichment_celltype=CL:0000540!5.22e-13!33;CL:0000047!5.22e-13!33;CL:0000031!5.22e-13!33;CL:0000404!5.22e-13!33;CL:0000393!5.55e-11!39;CL:0000211!5.55e-11!39;CL:0000221!8.19e-11!44;CL:0000133!8.19e-11!44;CL:0002319!1.91e-10!43;CL:0000055!1.52e-08!50;CL:0000117!1.69e-07!23;CL:0000337!1.69e-07!23;CL:0000107!8.09e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,4.74e-23,33;CL:0000047,4.74e-23,33;CL:0000031,4.74e-23,33;CL:0000404,4.74e-23,33;CL:0000393,2.86e-21,39;CL:0000211,2.86e-21,39;CL:0000221,4.47e-18,44;CL:0000133,4.47e-18,44;CL:0002319,2.48e-17,43;CL:0000107,1.11e-12,9;CL:0000117,7.71e-12,23;CL:0000337,7.71e-12,23;CL:0002321,5.05e-11,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.69e-20!102;UBERON:0000924!3.69e-20!102;UBERON:0006601!3.69e-20!102;UBERON:0000073!9.46e-18!75;UBERON:0001016!9.46e-18!75;UBERON:0001017!4.99e-17!73;UBERON:0005743!4.99e-17!73;UBERON:0002346!1.21e-13!71;UBERON:0003075!1.21e-13!71;UBERON:0007284!1.21e-13!71;UBERON:0000033!1.85e-12!63;UBERON:0001049!3.25e-11!52;UBERON:0005068!3.25e-11!52;UBERON:0006241!3.25e-11!52;UBERON:0007135!3.25e-11!52;UBERON:0000153!9.50e-11!94;UBERON:0002020!2.55e-10!34;UBERON:0007811!2.64e-10!86;UBERON:0000955!3.42e-10!50;UBERON:0006238!3.42e-10!50;UBERON:0002616!1.12e-09!49;UBERON:0003056!8.59e-09!49;UBERON:0003080!1.35e-07!40;UBERON:0002791!1.58e-07!29;UBERON:0003528!1.58e-07!29;UBERON:0001893!1.58e-07!29;UBERON:0000010!2.62e-07!11;UBERON:0002780!3.33e-07!39;UBERON:0001890!3.33e-07!39;UBERON:0006240!3.33e-07!39;UBERON:0002410!8.09e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.29e-25,75;UBERON:0001017,7.13e-25,73;UBERON:0004121,6.43e-23,95;UBERON:0000924,6.43e-23,95;UBERON:0006601,6.43e-23,95;UBERON:0000073,4.51e-14,54;UBERON:0002346,3.13e-13,64;UBERON:0003075,3.13e-13,64;UBERON:0007284,3.13e-13,64;UBERON:0010371,4.10e-13,73;UBERON:0002020,6.27e-13,34;UBERON:0002410,1.11e-12,9;UBERON:0000010,3.04e-12,11;UBERON:0001049,4.36e-12,52;UBERON:0005068,4.36e-12,52;UBERON:0006241,4.36e-12,52;UBERON:0007135,4.36e-12,52;UBERON:0002240,5.57e-09,6;UBERON:0005174,5.57e-09,6;UBERON:0001137,5.57e-09,6;UBERON:0010314,1.90e-08,92;UBERON:0003076,2.10e-08,12;UBERON:0003057,2.10e-08,12;UBERON:0001948,4.21e-08,5;UBERON:0002315,4.21e-08,5;UBERON:0003528,4.79e-08,29;UBERON:0002791,4.79e-08,29;UBERON:0001893,4.79e-08,29;UBERON:0000955,4.90e-08,47;UBERON:0006238,4.90e-08,47;UBERON:0002616,2.68e-07,46
|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0,0.129123323441576,0.84473233291,1.17032263160997,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,1.7008658030214,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,1.28482726513177,0,0.65407546914134,0.439372365468944,0.58328969722285,0,0,0,0.725362142011344,1.00828139742739,1.02903774414379,0,0,1.01158230429799,1.05798195854407,0,0,0,0,0,0.7104801149461,0,0.768436610643109,1.24427534770173,0.945041568321835,2.10324961351382,3.99911378165325,1.98781686856452,1.34739879136449,0.479227355091182,0,2.20231761998777,2.80912143787413,2.61131106535614,1.31886287730194,0.457438218012048,0.52091337055676,1.95428099300967,0.56276261003168,1.83357897332172,3.53554302568401,3.27454865837937,2.23679334990361,0.681535739998656,1.81371744256285,0,0,0.679971333707751,0,0,0,0.280888840263504,0.340860645156116,0,0,1.12674735821344,0,0,7.11066703153331,0.216491041011214,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,0.608930956624282,0.691846491768175,0.150722640552623,0.23517741427141,0.502666365318702,0,0.144599356919912,0,0.647067399789637,0,0,0,0.292780797011547,1.25668024088073,0.510914110417183,0.239630249011841,0,0,1.49790639404823,0.457500602818626,1.7591609295801,0.695297280769106,2.04572365864264,1.0389402227978,0.973447578406546,0.203678727700633,0.124406970610093,0.252722758433675,1.05220927943237,0.520481771850815,0.689706313300419,0.720248519221397,0.90422890701429,0.612328492361951,1.2811372028485,0.468508622798644,0.258703370739016,0.862271971731369,0.378212160335639,1.93546236580344,0.43839146485515,0.834141747676794,0.348252166522167,0.61734640922383,0.995171334092466,0,0,0,0.828503090142008,0,0.540186184383045,0.946978942340841,0,0.617068451549513,0.697601834251224,0.804820204198858,0.583826711835847,0.493679549740441,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,1.26173969138476,1.54356918568927,0.330418782983798,0,0.426576501070468,1.62565670302307,0.257734922644187,0,0,0.570676878337677,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0.571242563048644,1.1270773567308,0.203651327845314,0.193952487167626,0.631222379012867,0.442655759869801,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0.568474235311454,0.651859905768103,0.509235257325564,0.938760993154008,0.167506257441816,1.19021820443007,0.780534591431195,0.472905432318573,0.221464689648775,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0.983528546038072,0.827810238914197,1.60550589987792,2.34423373184406,0.819674726883377,0.504941854408746,1.89304931649754,1.95219372148319,1.72338718186239,3.10659437338318,5.56996685205985,10.190755108398,3.23848561339915,2.92255857911312,1.58115111178609,2.57057053137446,0.283880170416537,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0,0,1.05418608574999,0,0.340439605753788,0.36012218806262,0.388076051348264,0.428674070063185,0.709360934569094,0.535106452806212,0.164549020602121,0.304464949114599,0,0.63549621259146,0.441056796109924,1.15420377059036,0.161464426695906,0.904693873922338,0.596861720015682,0.328281799490123,0,1.48340241608408,0,0.206386867963223,0.370389054739423,0,0.27338845544205,0,0,0.139951452323658,0,0.954670618015114,0.790839983952838,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0.578574190077352,0,0,2.4853572523477,1.69107881605257,0.747582730219894,0.330916980914195,0.583353565032143,0.904118764344118,0.675824501963113,1.29092962510329,3.25510962109875,6.60613869881978,4.34851417486811,4.03242008761012,0,0.202725215290164,0.102710957164827,0.51968329191118,0.895133478337407,0.198681354781265,0.480781798079875,0.590758108698309,0.504832249740738,0.15241361331,0.604957110821043,0.682205165178267,0.384847366561318,0.935015217452552,0.226730383615211,0.221985953374065,0.448569283047378,0,0.386379188064381,0,0,0,1.00314420807073,1.6942555278512,1.38097570952153,2.29158205375759,1.54667864109319,2.74033007908257,3.0215755895588,0.675022500231806,0.900642406448441,0,2.07104124700728,1.03787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,0.735374033800057,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,1.32038438970253,0.936415074698824,0.704276676453562,0.574354689556133,0.476293691283074,0.811190281613988,0.77163688185482,0.412085900803307,1.17759136107518,0,0.354951612318675,0.476872379894642,0.581385666529314,0.470546902076653,0.423073039458382,0.73171189149109,0.526139422875686,0.950628796921032,0,0.355905054372522,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0,0.701794825336225,0.644613162144895,0.765153328275374,0.441182838239031,0.695603506861264
|short_description=p5@Srpk2
}}

Revision as of 07:15, 14 September 2013

Short description:p5@Srpk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Srpk2_5end
Coexpression cluster:MCL_coexpression_mm9:797
Association with transcript: 29bp_to_ENSMUST00000171956, uc008wqh.1, uc008wqj.1_5end
EntrezGene:Srpk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Srpk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D96.61
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.29e-2575
central nervous system7.13e-2573
ectoderm-derived structure6.43e-2395
ectoderm6.43e-2395
presumptive ectoderm6.43e-2395
regional part of nervous system4.51e-1454
neurectoderm3.13e-1364
neural plate3.13e-1364
presumptive neural plate3.13e-1364
ecto-epithelium4.10e-1373
gray matter6.27e-1334
autonomic nervous system1.11e-129
peripheral nervous system3.04e-1211
neural tube4.36e-1252
neural rod4.36e-1252
future spinal cord4.36e-1252
neural keel4.36e-1252
spinal cord5.57e-096
dorsal region element5.57e-096
dorsum5.57e-096
structure with developmental contribution from neural crest1.90e-0892
posterior neural tube2.10e-0812
chordal neural plate2.10e-0812
regional part of spinal cord4.21e-085
gray matter of spinal cord4.21e-085
brain grey matter4.79e-0829
regional part of telencephalon4.79e-0829
telencephalon4.79e-0829
brain4.90e-0847
future brain4.90e-0847
regional part of brain2.68e-0746







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