FFCP PHASE1:Mm9::chr5:73305337..73305352,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:73305337..73305352,-|id=chr5:73305337..73305352,-|ontology_enrichment_celltype=CL:0000624!9.26e-08!8;CL:0000988!1.18e-07!32;CL:0002032!1.18e-07!32;CL:0000037!1.18e-07!32;CL:0000566!1.18e-07!32;CL:0000837!1.18e-07!32;CL:0000542!1.66e-07!13;CL:0000051!1.66e-07!13;CL:0000063!3.02e-07!66;CL:0000838!6.09e-07!12|ontology_enrichment_celltype_v019_2=CL:0000764,1.55e-22,3;CL:0000765,1.55e-22,3;CL:0000038,1.55e-22,3;CL:0000547,1.55e-22,3;CL:0000213,2.44e-08,1;CL:0002078,2.44e-08,1;CL:0000115,2.44e-08,1;CL:0002262,2.44e-08,1;CL:1000398,2.44e-08,1;CL:0000355,4.85e-08,9;CL:0000050,6.38e-08,9|ontology_enrichment_disease=DOID:0050686!2.44e-08!6|ontology_enrichment_disease_v019_2=DOID:0050686,7.84e-44,6;DOID:0060100,6.63e-23,3;DOID:4045,6.63e-23,3;DOID:2531,1.55e-22,3;DOID:0060083,1.55e-22,3;DOID:1240,1.55e-22,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.44e-08,1;UBERON:0001281,2.44e-08,1;UBERON:0000353,2.44e-08,1;UBERON:0003497,2.44e-08,1;UBERON:0003909,2.44e-08,1;UBERON:0003928,2.44e-08,1;UBERON:0003835,2.44e-08,1;UBERON:0003513,2.44e-08,1;UBERON:0001280,2.44e-08,1;UBERON:0004647,2.44e-08,1;UBERON:0002294,2.44e-08,1;UBERON:0001173,2.44e-08,1;UBERON:0004912,2.44e-08,1;UBERON:0005171,2.44e-08,1;UBERON:0001134,4.85e-08,9;UBERON:0002036,4.85e-08,9;UBERON:0002385,4.85e-08,9;UBERON:0000486,4.85e-08,9;UBERON:0007503,4.85e-08,9;UBERON:0001015,4.85e-08,9;UBERON:0002329,4.85e-08,9;UBERON:0003082,4.85e-08,9;UBERON:0003059,4.85e-08,9;UBERON:0007282,4.85e-08,9;UBERON:0004290,4.85e-08,9;UBERON:0009618,4.85e-08,9;UBERON:0000383,2.75e-07,10|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0.233612640595526,0.774739940649458,0.563154888606667,0.468129052643987,0.171217968225505,0.0797721589953364,0.684802919724823,0.262261207256992,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,4.44521471421742,3.69038872550742,15.8481681015439,0.288851619751275,0.332469290716985,0.204169356262369,12.5559489221072,16.4080422349998,4.71171369576418,53.5290654108223,24.589637458504,13.1087795318411,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,2.39961092397363,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0.459804208866946,0.180062129805349,0,0,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0.772043721344145,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0.697601834251224,0,0.467061369468678,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0.566153061577665,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.301564624640779,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0.483168241652012,0.576060012515731,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.906921534460845,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0,0|short_description=p@chr5:73305337..73305352,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:73305337..73305352,- | |||
|id=chr5:73305337..73305352,- | |||
|ontology_enrichment_celltype=CL:0000624!9.26e-08!8;CL:0000988!1.18e-07!32;CL:0002032!1.18e-07!32;CL:0000037!1.18e-07!32;CL:0000566!1.18e-07!32;CL:0000837!1.18e-07!32;CL:0000542!1.66e-07!13;CL:0000051!1.66e-07!13;CL:0000063!3.02e-07!66;CL:0000838!6.09e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.55e-22,3;CL:0000765,1.55e-22,3;CL:0000038,1.55e-22,3;CL:0000547,1.55e-22,3;CL:0000213,2.44e-08,1;CL:0002078,2.44e-08,1;CL:0000115,2.44e-08,1;CL:0002262,2.44e-08,1;CL:1000398,2.44e-08,1;CL:0000355,4.85e-08,9;CL:0000050,6.38e-08,9 | |||
|ontology_enrichment_disease=DOID:0050686!2.44e-08!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,7.84e-44,6;DOID:0060100,6.63e-23,3;DOID:4045,6.63e-23,3;DOID:2531,1.55e-22,3;DOID:0060083,1.55e-22,3;DOID:1240,1.55e-22,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.44e-08,1;UBERON:0001281,2.44e-08,1;UBERON:0000353,2.44e-08,1;UBERON:0003497,2.44e-08,1;UBERON:0003909,2.44e-08,1;UBERON:0003928,2.44e-08,1;UBERON:0003835,2.44e-08,1;UBERON:0003513,2.44e-08,1;UBERON:0001280,2.44e-08,1;UBERON:0004647,2.44e-08,1;UBERON:0002294,2.44e-08,1;UBERON:0001173,2.44e-08,1;UBERON:0004912,2.44e-08,1;UBERON:0005171,2.44e-08,1;UBERON:0001134,4.85e-08,9;UBERON:0002036,4.85e-08,9;UBERON:0002385,4.85e-08,9;UBERON:0000486,4.85e-08,9;UBERON:0007503,4.85e-08,9;UBERON:0001015,4.85e-08,9;UBERON:0002329,4.85e-08,9;UBERON:0003082,4.85e-08,9;UBERON:0003059,4.85e-08,9;UBERON:0007282,4.85e-08,9;UBERON:0004290,4.85e-08,9;UBERON:0009618,4.85e-08,9;UBERON:0000383,2.75e-07,10 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0.233612640595526,0.774739940649458,0.563154888606667,0.468129052643987,0.171217968225505,0.0797721589953364,0.684802919724823,0.262261207256992,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,4.44521471421742,3.69038872550742,15.8481681015439,0.288851619751275,0.332469290716985,0.204169356262369,12.5559489221072,16.4080422349998,4.71171369576418,53.5290654108223,24.589637458504,13.1087795318411,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,2.39961092397363,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0.459804208866946,0.180062129805349,0,0,0.2562274405697,0.0937017245597288,0,0.215567992932842,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0.772043721344145,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0.697601834251224,0,0.467061369468678,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0.566153061577665,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.301564624640779,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0.483168241652012,0.576060012515731,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,0.906921534460845,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr5:73305337..73305352,- | |||
}} |
Revision as of 07:59, 14 September 2013
Short description: | p@chr5:73305337..73305352, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:73305337..73305352, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.55e-22 | 3 |
erythroblast | 1.55e-22 | 3 |
erythroid progenitor cell | 1.55e-22 | 3 |
proerythroblast | 1.55e-22 | 3 |
lining cell | 2.44e-08 | 1 |
meso-epithelial cell | 2.44e-08 | 1 |
endothelial cell | 2.44e-08 | 1 |
endothelial cell of sinusoid | 2.44e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.44e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.85e-08 | 9 |
megakaryocyte-erythroid progenitor cell | 6.38e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.44e-08 | 1 |
hepatic sinusoid | 2.44e-08 | 1 |
parenchyma | 2.44e-08 | 1 |
abdomen blood vessel | 2.44e-08 | 1 |
sinusoid | 2.44e-08 | 1 |
digestive system duct | 2.44e-08 | 1 |
abdominal segment blood vessel | 2.44e-08 | 1 |
trunk blood vessel | 2.44e-08 | 1 |
liver parenchyma | 2.44e-08 | 1 |
liver lobule | 2.44e-08 | 1 |
biliary system | 2.44e-08 | 1 |
biliary tree | 2.44e-08 | 1 |
biliary bud | 2.44e-08 | 1 |
hepatic duct | 2.44e-08 | 1 |
skeletal muscle tissue | 4.85e-08 | 9 |
striated muscle tissue | 4.85e-08 | 9 |
muscle tissue | 4.85e-08 | 9 |
multilaminar epithelium | 4.85e-08 | 9 |
epithelial vesicle | 4.85e-08 | 9 |
musculature | 4.85e-08 | 9 |
somite | 4.85e-08 | 9 |
myotome | 4.85e-08 | 9 |
presomitic mesoderm | 4.85e-08 | 9 |
presumptive segmental plate | 4.85e-08 | 9 |
dermomyotome | 4.85e-08 | 9 |
trunk paraxial mesoderm | 4.85e-08 | 9 |
musculature of body | 2.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 7.84e-44 | 6 |
musculoskeletal system cancer | 6.63e-23 | 3 |
muscle cancer | 6.63e-23 | 3 |
hematologic cancer | 1.55e-22 | 3 |
immune system cancer | 1.55e-22 | 3 |
leukemia | 1.55e-22 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.